Salvelinus fontinalis (brook trout): 129853169
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Entry
129853169 CDS
T11136
Name
(RefSeq) snRNA-activating protein complex subunit 4-like
KO
K09453
snRNA-activating protein complex subunit 4
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129853169
03021 Transcription machinery [BR:
sfon03021
]
129853169
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
129853169
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
129853169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-binding_2
HTH_CHD1_Hrp3
SLIDE
Motif
Other DBs
NCBI-GeneID:
129853169
NCBI-ProteinID:
XP_055774892
LinkDB
All DBs
Position
4:complement(16303688..16331898)
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AA seq
1377 aa
AA seq
DB search
MSSDDLLAQREKIERQILALEQNLGPESNSGIELLSSDSCASDDGSDDNASQPEDLGPLG
NLEAERERIQREIEELECTLGPDVDGQGSATELSEEDSAEELDLPQNTDTCLQINLVYQE
VLKEKLEDLERLLTDNQQQQKEIMSQLSGTGTPQATTSGEPTLKLFLGSFLKPYFRDKVT
FLGPPANPETREKMSKRIRPTDDVKMKRWEGWQKTLLINAVVKDSMKRMIQPKLSKVEYL
TQKMAKAENVEKLILRKQITEIEKDIEAIGALKEDELMGGRYDDHDWQKISNIDFEGIRE
AEDIKSFWQNYLHPSINKASWKEDEIEMLKKVSVKYGHHNWDQIADELGTNRTAFMCLQT
YQRYICTDFKRRMWGRVEDDILRELVEKMRIGNYIPYTQISYFMEGRDSCQLMYRWTQVL
DPTLTKGYWSKEEDEMLLRAVAKHGAGNWWKMREDVPGRNDSQCRDRYVDVLIGNVKKGP
FDEEEKAQLRQLVEKYGRKWAKIAAEIPNRIDCQVLQQWRRMTGYKPRPRRDRSRRGLQR
RKAVAVRSIKSRLKRLDEDVNSSADEEESVKMEFMDSDDEKKQKFFELYESDQESDIFED
YTQPDMEQWIPMREKQFEGMVRSVMVEWPSKYTTQEQAATDRQAAARKFMVVRSTVLDRF
GKPAATVIGQNPPILAKKDCNSDLAMLQVCYGEVRNLITWKKTNATKHKNSGSTSSDQGT
PHNCSRQKNSSANSETYTTLNYSLQLAVTPWVGNVLMPPPISSNKLSEADMVRERSESIG
LSKTPVFLFFLQVLRVDAEGCKQIIKMRNKQAVLMGHRSWEAKPALLKKTKQRHGPRTVA
SMLNRKGNEQQNSQQQNSQLVKMIPHTFVIGQPVIQSTPHPTILFTPTSRQQLMPSTLTQ
PGPSTPSRPIPSTPSQPILPAPVQSSTIIDRVNVQVNENLSAKKRNLKPTEKSQAPKEVK
DAAIAKKSVEHSPKRKKARTQSPPKGNLVDQLSNIILSPTQTAWVLTRNGLVPISGIGIQ
MTPQNLPANTFAPACPSPVIINQQVPLTLNAVAAQGSSNVTHVCPSPSASSIAQGTASPS
VFSSPSTSTTFISNTAPRMTNPVNSMRMTNPALQTVTTTGPQLNAVSPVLSVPMNKVVSA
PIRPQTGPPQAFVLNIPPGSLPASFPQGAFRIMQLYPPKCVPPPRKPEVIQFDPKLMFME
DPAKVSEWLNGKNGIALPELDVTLPYLPPFVSSLNTLSSLLKCKTTLAISAMPVLRPEEK
ENQEEEQQVAAMRSLVAERFIHNPGYLLLKARFLSCFTMPALLATINPVKFSMSPTPDHS
DVEEEPFRNRPGMQNCTLYEQPTTLQAPLLSADGTGSPATFFSGITTRNTSCDQDME
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggatgaccttcttgcacagagggagaaaattgaacgccagattttggcgctg
gagcaaaaccttggacccgaaagcaattccggcattgaactactatcttcagatagttgt
gcatctgatgatggatcagatgacaatgcttctcaaccagaagatttgggtcctctgggg
aacctggaggcagagcgggagcgaatacagagagagattgaagagttggagtgcactctt
ggtccagatgtggatggccaaggaagtgcaacagaattgagcgaagaggacagtgctgag
gagctggacctaccccagaacacagatacatgtctgcaaattaacctggtttatcaggaa
gtgttgaaagagaaattagaggacctggagcgactgttaacagacaatcaacagcaacaa
aaagagattatgtctcagctatctggcacaggaactccccaggctaccacatctggagaa
cccacactgaagcttttcttagggagctttctgaagccctatttcagagataaagtcaca
tttctgggcccacccgctaatccagaaaccagggagaagatgagtaaaagaatcagacct
actgatgacgtcaagatgaaaagatgggaggggtggcagaagactctgctgataaatgct
gtggtcaaagacagcatgaaacgcatgatacagcccaagctgtccaaggttgaatacctt
acacagaaaatggccaaagctgaaaacgtggaaaagctaatcctgcggaaacaaatcact
gaaattgaaaaggacattgaggccatcggtgcactgaaggaggatgagctgatgggtggc
cgctatgatgaccatgactggcaaaagatttccaatattgattttgaaggcatccgtgaa
gcagaggacataaaaagcttttggcagaactacctgcatccctccattaacaaagccagt
tggaaggaagacgaaattgagatgctcaagaaagtttctgtgaaatatgggcaccacaac
tgggatcagattgctgatgaacttgggaccaacaggacagccttcatgtgtctccagaca
taccaacgctacatctgcaccgacttcaagaggaggatgtggggcagagtggaggatgac
atccttagagagctggtggagaagatgcggatagggaactacatcccttacacccagatc
tcctatttcatggagggccgggattcatgccagctgatgtatcggtggactcaggttctg
gaccccaccctcacgaaaggctattggtctaaagaagaagatgagatgctactgagagca
gtggctaaacacggggcggggaactggtggaagatgcgtgaggatgtgcctggcagaaat
gatagccagtgtagggacaggtatgtggacgtcctgattgggaacgtgaagaaggggcca
tttgacgaggaggaaaaggcgcaacttcgacaattggtggagaaatatggacgtaaatgg
gctaagatagctgctgaaatacctaacagaattgactgtcaggtccttcaacagtggagg
agaatgacagggtacaagcccagacctcggagggacagaagtagaagaggattgcagagg
agaaaggcagtggctgtgaggagcatcaagagtaggctgaagaggctagacgaggatgtg
aactcaagcgccgatgaagaggagagcgtcaagatggaatttatggacagtgacgacgaa
aagaaacagaagttctttgaactgtacgaatctgatcaggaaagtgacatttttgaagac
tacacccaaccagacatggagcaatggatccccatgcgagagaagcagtttgaagggatg
gtgaggagtgtgatggttgaatggcccagcaagtacacaacgcaagagcaggcagcgacg
gacaggcaggccgcagcacgcaagttcatggtggtacgctccaccgtcctggaccgcttt
ggcaagcctgctgccactgtcatcggacaaaaccccccaatcctggcaaagaaggattgc
aacagtgacctggccatgctccaggtatgctatggagaggtgaggaacctgatcacttgg
aagaaaacaaatgccacaaaacataaaaacagtgggtctacaagcagtgaccaggggacg
cctcacaattgctcaaggcaaaagaactcctctgccaacagtgaaacctacaccactctc
aactattcccttcagttggcagtcactccctgggtgggcaatgtgcttatgcccccacca
atctcttcaaacaagctcagtgaagctgacatggtgcgagagagatcagagagcattgga
ctctccaagaccccagtgttcttgttctttctgcaggtcctccgtgtggatgctgagggc
tgtaagcagataattaaaatgcgtaacaaacaagcggtactcatgggacacagatcttgg
gaagcgaaaccggctttattgaaaaaaacaaagcaacggcatggtcccagaacggtagcc
agtatgctgaaccggaagggaaacgagcagcagaacagccagcaacaaaacagtcaactt
gtgaagatgatccctcatacctttgtcattggacagcctgtaatacagtccaccccacat
cctacgatcctattcactccaacttccagacaacaactcatgccttctacacttacccaa
cccggaccctctacccccagccgacccataccttccacccccagccaacctatactccct
gctcctgtccaatcctcaaccataatagacagggtgaatgttcaggtaaatgagaatctt
tcagcaaagaaacgcaatctcaaacctactgagaaatcacaggcccccaaagaggttaag
gatgctgcaattgctaaaaagtcagtggaacattcacctaaacgcaagaaagcccgtacg
caaagtcctcccaaaggaaacctggttgaccaactttctaacataattctgtcccctaca
caaactgcctgggtcctgacgcgcaatggacttgtgccaatcagtggcattggcattcag
atgacacctcagaatctaccagcaaatacttttgcacctgcttgtccatcacctgttatt
atcaaccagcaagtccctctaacactaaatgctgttgcagcacagggctcctccaatgtg
acccatgtctgcccatctccctctgcgtcatccatagcacagggaactgcctccccatct
gttttctcctctccctccacctccactaccttcataagcaacactgctccaaggatgacc
aacccagtgaacagcatgagaatgactaacccagccctgcagactgtgacaaccactggt
ccccagctcaatgcagtgtcacctgttctctctgttcccatgaacaaggtcgtctcggct
cccattagaccacagactggcccgccacaggctttcgtcctcaacatccctccaggctct
cttccggcctcattccctcagggagccttccgaatcatgcagctttacccccctaaatgt
gtccctccaccccgcaagccagaagtaatacagtttgaccctaagttgatgttcatggag
gaccctgccaaagtgagcgagtggttgaatggcaagaatggaattgcgcttccggagttg
gatgtcactctaccctaccttcccccctttgtcagcagcctgaatactctgtcgagtctc
ctgaaatgtaaaacgacattggcaattagtgccatgcctgtcctgcgcccagaggagaaa
gagaaccaggaagaggagcagcaggtagcggcaatgcggagcctcgtggcagagcgtttc
atccataacccgggctacctcctcctgaaggctcgcttcttgtcttgtttcaccatgcct
gctcttctggctactatcaatccagtcaaattctccatgtctcccaccccggaccacagt
gatgtggaggaggaacctttcaggaaccgtccagggatgcagaactgtactttgtatgaa
cagccaacaacactccaggcccctctgctaagcgctgatggaacaggatctcctgccacc
ttcttctccggaatcaccacaagaaatacaagctgtgaccaagacatggagtaa
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