Salvelinus fontinalis (brook trout): 129853182
Help
Entry
129853182 CDS
T11136
Name
(RefSeq) ubiquitin-protein ligase E3B-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129853182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129853182
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129853182
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
HECT type E3
129853182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129853182
NCBI-ProteinID:
XP_055774910
LinkDB
All DBs
Position
4:16640127..16657729
Genome browser
AA seq
1065 aa
AA seq
DB search
MFSATQSSKSEFLDKARQAREERKGYKERERAATLIQALVRRFLCRCKLQKQIRKEVDDF
FQDVGTTKRNALSIFKIARKLLFIFCQEDKLRFEKLCRSILGSMEVENEPKVWYVSLALF
KDLTIPWIKQIKDVLWVSCNFLKKLKPDILQDNKLVTLYLTMLVTFTDTSTWKIVRGKGE
ALRPALTRICENIMGHLNQKGFYSILQILLTNGLARSRPSLTKGTLTAVFTLALRPVIAA
HFSDNLLRSLLIHIMSVPAVVSHINTITPECMATIQTHDLLRKFTLFLSREEQCVDICVC
LEGSHTLCLLGNLIHLGYLNEKVLEEEANHFVKDLTDMLSYCQRYVSQKKSNLTHWHPVL
GWFSQTVDYGLNESMPLVTKQLQYLWGMPVIRTLFSDVLSKKLETQEPTPPPQPTTSQNN
LPVKSLFKRAFQKSASVRNILKPVGGRRVDSAEVQKVCSICVLYQTALTTLTQIRLQILT
GLTYLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLMLFCDCSRHLITIL
DDIEVYEEQISFKTEELVTISSFLNTFVYKMVWDGILENAKGEKLDLFHSVHGWLMVLYE
RDCRRRFSPDDNWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLFRNIITK
EKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVDEA
GIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGKMLG
KAMYEGIVVDVPFASFFLSQVMGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVGDL
GLTLSYDEDVMGQLVCHELIPGGKTMQVTNENKISYIHLMAHFRMHTQIKEQTAAFIRGY
RSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILSSD
FSSEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRK
KEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcaactcagagttccaagtctgagttcctggacaaagccaggcaggcacgt
gaggagaggaaggggtacaaagagagggagagagcagccactctgattcaagcgctggtc
aggagattcctctgtcgctgcaaactccagaagcaaataaggaaagaggttgatgacttc
tttcaagatgtcggaacaacaaaaagaaatgcactatcaatttttaaaattgctcggaag
ttgttattcattttttgtcaagaggataagctgaggtttgagaagctttgtcgctccatt
cttggtagcatggaggttgaaaatgagcccaaagtttggtatgtgtcactggcccttttc
aaagacctcaccatcccatggataaagcagatcaaagatgttctgtgggtctcctgtaat
tttctgaaaaaattaaagcctgacatcctgcaggacaataagctggtgactttgtacctt
accatgctggtgaccttcacagacacgtcaacctggaagatagtgagagggaaaggagag
gccctcagaccagcgttgacccggatctgtgagaacatcatggggcatctcaatcaaaag
ggattttattcaatactgcagatactactcaccaacggattggcacgctccagaccctct
cttaccaagggcacactcacagcagtattcacgttggcattaagacctgtcattgctgct
cacttctctgacaacctgctgaggtctcttctcatccacatcatgtctgtcccagctgtc
gtctcccacatcaacaccatcaccccagagtgcatggccaccatacagacccacgacctg
ctgaggaagttcaccctgttcctgagccgcgaggagcagtgtgttgacatctgtgtctgc
ctggaggggagccacacactgtgcttgctgggtaacctgattcacctgggctacctcaac
gagaaagtcctggaggaggaggccaaccactttgttaaagacctgacggacatgctgtcc
tactgccagagatacgtgtcccagaagaaatccaacctcactcactggcacccggtccta
ggctggttttcccaaactgtagactacggtctgaatgagtcgatgccactggtcaccaag
cagctgcagtacctgtggggcatgcctgtgatccggactctcttcagtgacgtcctcagc
aaaaagcttgagacccaagagcccacgcctccaccacagcctaccacgtcgcagaacaac
ctgccagtcaagagcctctttaagcgggcgtttcagaagtctgcctcggtgcgcaacatc
ttgaagccggtcggcgggagacgagtggactctgctgaggtgcagaaggtgtgcagtatc
tgtgtgctgtaccagacagccctcaccacgctcactcagatacgactgcaaatcctcact
ggcctaacctacctggatgaccttctgcctaagctgtgggccttcatctgcgagctaggc
ccccagggaggcctcaagctgttcatggagtgcctgaacaacgacacagaggagtctaag
cagctgctggccatgctcatgttgttctgtgactgctccagacacctcatcacgatcctg
gatgacatcgaggtttacgaggagcagatctcatttaagacggaggagctcgtcaccatc
tcctcgtttctcaacacgtttgtgtacaagatggtctgggacggcatcttagagaatgcc
aagggggagaagctggacctgttccacagtgttcacggctggctgatggtgctctatgag
cgggactgcaggaggaggttctcccctgatgacaactggctgcgcaaggatctgaagccg
agccttttgttccaagagctggagaagggcaagaggagagctcagctgttactgcagtac
ataccacacgtcattccccacaaaaacagggtcctgctgttccggaacattattaccaag
gagaaggaaaccttgggattggtggagacaagctccgcgtctccgcatgtcacccatatc
accattcgccgctcacggatgttagaggatggttatgaccaactccgccggttgcctgtc
aactccatcaaaggtgtgatccgtgtgaagtttgtcaacgaccttggtgtggacgaggcc
ggaatcgaccaggacggcgtcttcaaggagttcctggaagagatcatcaagaaagtcttc
aacccggcactcaacctctttaagaccaccagtggcaacgagaggttgtacccctcccct
acatcctacatccatgagaaccacctgcagctttttgagtttgtggggaagatgcttggc
aaagcaatgtatgagggcatcgtggtggacgtacccttcgcctccttcttcctcagccag
gtgatgggtcaccaccacagcaccttctacagctccatcgacgagctgccctccctggat
tctgagttctacaagaacctcacctccatcaagcgctatgacggggatgttggtgatttg
ggactgacactatcgtatgacgaggacgttatgggacagctggtctgtcacgagctgatt
cctggaggaaagacaatgcaagtcaccaacgaaaacaagatcagctacatccacctgatg
gcgcacttccgcatgcacacgcagatcaaggagcagacggcagcttttatccgaggatac
cgcagcatcatcaaccccgagtggctgcacatgttctccacccccgaggtccagcgcctc
gtctccggggacaacgccgagatcgacctggacgacctcaagaaacacacagtttactat
ggaggtttccacagcagccatcgggtcatcatctggctgtgggacatcctgtccagtgac
ttctcctctgaggaaagagccatgttcctcaagtttgtcaccagttgttcaagacccccc
ctcctaggttttgcctacctcaagccccctttctccatccgctgtgtggaggtgtctgac
gatcaggacactggggacaccctaggcagcgtcctccggggtttcttcaccatccggaag
aaggaaccaggcggtcgcctccccacctcgtccacctgcttcaacctgctcaagctgcct
aactacagcaagaagagcatcctgcgtgacaagctccgctacgccatcagtatgaacaca
ggttttgagctctcataa
DBGET
integrated database retrieval system
