Salvelinus fontinalis (brook trout): 129853402
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Entry
129853402 CDS
T11136
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129853402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129853402
03041 Spliceosome [BR:
sfon03041
]
129853402
03032 DNA replication proteins [BR:
sfon03032
]
129853402
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
129853402
Spliceosome [BR:
sfon03041
]
Complex A
U1 snRNP components
Sm proteins
129853402
U2 snRNP components
129853402
Complex B
U1 snRNP components
129853402
U4/U6.U5 tri-snRNP components
129853402
Complex C
U2 snRNP components
129853402
DNA replication proteins [BR:
sfon03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
129853402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Kringle
Motif
Other DBs
NCBI-GeneID:
129853402
NCBI-ProteinID:
XP_055775378
LinkDB
All DBs
Position
4:23562757..23564182
Genome browser
AA seq
127 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGAGAGRGKAAILKAQVAARGRGRGGMGRG
NIFPKRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtccattggagtgccaatcaaagtccttcatgaagctgagggccacatcgttacctgc
gagaccaacaccggggaggtgtaccgggggaaactcattgaagctgaggacaacatgaac
tgccagatggccaacatcacagtgactcacagagatggccgtgtagcccagctggagcag
gtgtacatccgaggcagcaagattcgattccttattctaccagacatgctgaagaacgca
ccaatgctaaagagtatgaagaacaagaaccagggagctggagctgggagaggcaaagct
gccattctcaaagcacaagtggctgctaggggtcgaggacgtggagggatgggaagagga
aatatattcccgaaaaggcgataa
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