Salvelinus fontinalis (brook trout): 129853467
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Entry
129853467 CDS
T11136
Name
(RefSeq) splicing regulator ARVCF-like isoform X1
KO
K28154
splicing regulator ARVCF
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129853467
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129853467
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
Arm_2
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
129853467
NCBI-ProteinID:
XP_055775513
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All DBs
Position
4:28224324..28458083
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AA seq
1043 aa
AA seq
DB search
MEDYEVCSAASILASVKEQEARFERLTRALEEERRNVSLQLERSNITADRLGGTGPNANL
PPNSQPLAWQQVVMQEQSPSNQTSSLAMMQEPQEMVEETVTIEEDPGTPTSHVSVVTSDD
GTTRRTETKDMSTNLKVTKMVKTVTTRTVRQVPLGPDGLPLPEGSSPLGSYTDSIDRRYL
KNGERYITTPQATSTLTRSYNYNDSYTDTLPPDAGGSQYGGRHYGLHDGYGIGDVTDNYG
SLSRGVNFRPPRYPYAMANSYRTENSYGTLPIRKDDYGHVAQPQVPMGSSSVDLNRSQPE
RFQPEPYGLEDDRRSLGPEEEEPYDLDPDYSTASRRQGTLPGTNRGRTVREPLRDGPRVR
GYEDPIEAELVDERHPYIHGMYAAPLAQPERGSMASLDRLAGRRSPSIDSIRKDPRWRDP
DLQEVIAMLGHPIDPVKSNAAAYLQHLCYENDKIKKDVRQLKGIPVLAGLLDHPKAEVHR
KACGALRNISYGKDHDNKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLK
MVIINHGLQTMTNEVIIPHSGWEHEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARR
RLRECEGLVDALLHALQSAVGKKDMDNKSVENCVCIMRNLSYHVHKEIPGAEKFTDPSVL
QAPGSVGPQRKKKDDAGCFGGKKAKEEWFNQGRKNGENAKSYDTLDLPKRTEPTKGFELL
YQPEVVRLYLSLLTESQNYNTLEAAAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELL
RSDADKVVRAVAIALRNLSIDRRNKDLIGSYAMRDLVSNLPSGQQRPAKNLEEDTVVAIL
NTIHEIVTDSSENARSLIQAQAIEKLVAINKTSQSPRENKAASHVLQTVWSYKDLRNALT
KEGWNKSHFQLTASGAPKAAKNGKPGYDDTTLPLMEKNQGQSVTAGETGDPPGLAYCGEL
STKKNGSGDMIPMDELGPDGYSTIDQRDKDCKYKSGGDGSVDLTEREPLKNDTNTKHYVR
SNRPAVNLVDACDVKPQPVDSWV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggaggactatgaggtgtgctcggccgccagtatcctggcttcggtgaaagagcaggag
gcgcgtttcgagcgtctgacccgggcgctggaggaggagcgacgcaacgtctccctgcag
ctggagcgttccaacataacagccgacaggctgggagggactgggcctaatgctaacctg
ccacccaacagccaacccctggcctggcagcaggtggtgatgcaggagcagagccccagt
aaccagacgtcgtctctggccatgatgcaggagccccaggagatggtggaggagacggtc
accattgaggaggaccctggcacacccacctcccacgtgtctgtggtcacctccgacgac
ggcaccacgcgacgcacagaaaccaaggatatgtcaactaacctgaaggtgacgaagatg
gtgaagacggtgaccacgcggacggttcgacaggtgcccctgggccccgacggcctgccc
ctgcccgagggctcctccccgctgggcagctacacagactccatcgaccggcgctacctg
aagaacggcgagcgctacatcaccacgccgcaggccacctccacgctcactcgctcctac
aactacaacgactcctacaccgacacgctcccccccgatgccggcgggagccagtatggt
gggcgtcactatggcctccacgacggctacgggattggagacgtgacagacaactacggc
agcctgtcgcgtggcgtcaacttccgaccgccccgctatccctacgccatggctaacagc
taccggacggagaacagctacgggaccttacccattcggaaggatgactacggccacgtg
gcccagcctcaggtgcccatgggcagcagcagtgtggacctgaaccggtcacagccagaa
cgcttccagccagagccctacggactggaggacgaccgccgcagcctgggccctgaggag
gaggagccctatgacctggaccctgactactccaccgccagccggcgccaaggcacgctg
cctggcaccaaccgcggcaggaccgtgagagagccgctccgcgacgggccacgtgtcagg
gggtacgaggaccccatcgaggcagagctggttgacgagcgacacccctacatccatggc
atgtacgcggcccccctggcccagcccgagagggggagcatggccagcctggaccgcctg
gctggccgccgctcgccctccatagacagcatccgcaaggacccgcgctggcgtgacccc
gacctgcaagaggtcatcgccatgcttggccaccctatcgacccggtcaagtccaacgcc
gccgcctacctgcagcacctgtgctacgagaacgacaagatcaagaaggatgtgcgccag
ctgaaggggatccctgtgctggcagggttgctggaccatcccaaggctgaggtccaccgc
aaggcctgtggagccctgaggaacatctcctacggcaaggaccacgacaacaaggtggcc
atcaagaactgcgatggtatcccagccctcatccgcctgctgaggaagacgaacgacatg
gaggtccgtgagctcatcacagggaccctgtggaacctgtcttcctatgagcctctgaag
atggtgattataaaccacgggcttcagactatgaccaacgaggtcatcatcccccactca
ggctgggagcacgagcccaacgaggactccaagccccgtgacgcagagtggaccaccgtc
ttcaagaacacctctggttgtctgaggaacgtgagttcggacggggccgaggcgaggcgc
aggctgagggagtgtgaggggctggtggacgctctgctccacgccctgcagtcagctgtg
gggaagaaagacatggacaacaagtctgtggagaactgtgtgtgtatcatgaggaacctg
tcctaccacgttcacaaggagatcccaggggctgagaagttcacagacccatcagtgctg
caggccccgggctctgtgggccctcagaggaagaagaaggacgacgcaggctgcttcgga
gggaagaaggccaaagaggagtggtttaatcaaggcaggaaaaacggagagaatgccaaa
agctacgacacgctggatctccccaaacgcactgaacccacaaaaggttttgagctgctg
taccagccagaggtagtgaggctgtacctgtctctgctcactgagagccagaactacaac
actctggaggctgcagcaggggccctgcagaacctcagtgccggacagtggacctggtcc
aactacatacgagccactgtgaggaaggagaagggtcttcccatcctggtggagctgctg
cgttctgatgctgacaaggtggtccgagccgtggccatcgccctgcgtaacctctccatc
gaccgccgcaacaaagacctgatcgggagctatgccatgagggacctggtgagtaacctg
cccagtggtcagcagcggccagccaagaacctggaggaagatacagtggtggccatcctc
aacaccatccacgagattgtgacggacagctccgagaacgcacgctccctcatccaggcc
caggccatcgagaaactggtggccatcaacaagacaagccaatcaccacgtgagaacaag
gctgcctcccacgtgctgcagacggtgtggagctacaaggacctgaggaacgccctgacc
aaggaaggatggaataagagccacttccagcttacagcgagcggcgcccctaaagcagcc
aagaacggcaagccaggctacgacgacactaccctgcccctgatggagaagaaccaaggt
cagtctgtgacggcaggcgagactggggatcctccgggcctggcctactgtggtgaactg
agcaccaagaaaaatggaagtggtgatatgatacctatggacgagcttggtccagatggc
tactccaccatcgaccagagagacaaggactgcaagtacaagagcggtggagacgggtca
gtggacctgacagaacgggagccattgaagaatgacacaaatacgaaacactatgtcagg
agtaacaggcctgcagtcaatctggtggatgcttgtgacgttaaacctcagcctgttgac
tcctgggtctaa
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