Salvelinus fontinalis (brook trout): 129853505
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Entry
129853505 CDS
T11136
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129853505
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129853505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
129853505
NCBI-ProteinID:
XP_055775600
LinkDB
All DBs
Position
4:complement(30890852..30923702)
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AA seq
1479 aa
AA seq
DB search
MKPDIHTLAHHLKQERLYVASEKQLIQRLNGDVLKTAERLYRAAWITKQQRINLDRLILT
SAEASPAECCQHAKVLEDTQFLDGYKTLGFQESIYGEFLGRVRENPRLVASCLVAGERLN
QEHTQGVIYTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSIL
FKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERFTPAQQERLFGEKGSE
GYRQKVAAAVEANEAKLVTLVNKFIGYLKQNTYCFPHNLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADGDGDPR
RKNSLAKFDKSCVAAFLDVVIGGRAVETPPMSSLNLLEGLSRTVAYMTHSQLLCLVDFVR
SVMAGDHLREEEHILLETLMANVPQSRTVKSNSLELTPSNTPQLSPTTTPANKKNRNIGQ
QLATSWDSTTTTLSAHIPLVTPFAASRSRSRTELAQQEEAEASSMESLQEVMPEEVLVIS
LGSSPQTIPGMMSENEVLTVQQTDGAQGYTPVDDTKHHCKPDKTLRFSLCSDNLEGISEG
PSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEHATTQDNLDDKLRKFEIRDM
MGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAVENMLGSLLCLPGSGSVL
LDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSDDTEVREVSSR
PSTPGLSVVSATSEDIPNKTEDLRSECSSDFGGKDSVTSPDGEESSHGAHHSLASPPSQA
DSLLAMFDPLSSGEDSSTGTIVRPKVHYARPLHPPPDPPIPETCALGQEPRYSLFTPHCL
AQAELEHTKQRHSYTDRLVRSRSSDIVCPGRRPTSDPGLNRRAAAEERDHAGAFFMGPFS
SPSKDSLKGEVEERKDSDEEKSDRSRPWWKKRFQSAIPKVLYWTAESEVPAPIAALRKRD
KQEKDNMGHERVPQDDPLFRNSQAQAAEDILDKYRNIKRTSPSEGATAAAYDATELCGDE
CVHNSPRDEALQNMSTDDLPDSASQTAQQHDSNKFSFSDAKKKLRLALCSAESVAFPLMA
PATTRNGLPDHTDFEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSRFDTRTCKKL
LAAIAEDYRKRAPYIAYLTRCRQGLQTSHAHLERLLQRVLRDKEVANRYFTTVCVRLLLE
HMEAKSLDFIKAFQGCTASDDKTAAVEDFLRYLYGAMAHDAIWQYASEDQLQDAQMAIER
SVMNRIFKLAFYPNQDGDILRDQLLQEHIARLSKVVTANHKALQIPEVYAREAPWPSAQS
EIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLL
STIQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagacatccacactctggcccatcacctgaagcaggagcggctgtatgtggcc
tcagagaagcagctgatccagcggctcaatggggacgtgctgaagactgctgagaggctg
taccgtgctgcctggatcaccaagcagcagaggatcaacctcgaccggctcatcctcacc
agtgctgaggcttccccggccgaatgctgccagcatgccaaagtgctggaggacacacag
ttcctggatggttacaagactctgggcttccaggagagcatctacggggagttcctgggc
cgggtgcgggagaatccccggctggtggcctcctgcctggtggctggggagaggctgaac
caggagcacacacagggggtcatttacactgttttcacctcactctatggcaactgtatc
atgcaggaggatgagagctacctcttgcaggtcctgcgatacttggtggagtttgagcta
aaggagagcgacaaccctcggcggctgctgcggcgaggcacgtgcgccttcagcatcctc
ttcaagctcttctctgaggggctgtactccgccaagctcttcctcaccgccaccctccac
gagcccatcatgcagctgctggtggaggacgaggaccacctggagacggacccctccaag
gtgacagagcgcttcacgccggcgcagcaggagcgcctgtttggggagaagggctcggag
ggctacaggcagaaggtggcggctgctgtggaggccaatgaggccaagctggtgaccctg
gtcaacaagttcattggctacctgaagcagaacacctactgtttcccccacaacctgcgt
tggattgtgtctcagatgtacaagacgctgtcgtgtgtggagaggctagaggtgggcgag
gtgcggaccatgtgcacggacctgctgctcacctgcttcatctgcccagccatagtcaac
cctgagcagtatggcataatctcagatgcccctatcaacgaggtggctcgcttcaacctc
atgcaggtagggcagcttcttcaacagttggcaatggctgacggtgatggagaccccagg
aggaaaaacagtttggccaagttcgataagagctgcgtagctgccttcttggatgtggta
atcggagggagagctgtggagacgccgcccatgtcctccttgaacctacttgaaggcctc
agcaggactgtggcgtacatgacacacagtcagctgctctgcctggtggactttgtacgg
agtgtgatggcaggggaccacctccgggaggaggagcacatactcctggagaccctaatg
gccaacgtgccccagtcccgcacagtgaagagcaacagtctggagctcaccccctccaac
accccccagctttccccaactaccacccccgccaacaagaagaacaggaacataggacaa
cagttagcaacgtcctgggactccacaaccaccaccctgtctgcacacattccattagtt
accccttttgcagcctcccgcagtcgcagccgtactgagctggcccagcaggaggaagca
gaggccagctccatggaatccctgcaggaggtgatgccagaagaggtcctagtgatctca
ctaggaagcagcccgcagaccatccccggcatgatgtcagagaatgaggtgttgaccgtg
cagcagactgatggagcacaagggtacactcctgtagacgacaccaagcaccattgcaaa
ccagacaaaaccctgcgtttctccctctgcagtgacaacctggagggtatctcagagggt
ccgtccaaccggtctaactctgtgtcgtctctggacctggagggagagtctgtgtcagag
ctgggagctgggccatcagggagcaatggggtggaggctctacaactgctggagcatgaa
catgccaccactcaggacaacctggatgacaaactgaggaagtttgagatacgagacatg
atgggcctgacagatgaccgggatatctctgagactgtgagtgagacctggagcacagac
gtgctgggcagcgactttgaccccaacatagacgaagatagactgcaggaaatagctggg
gcggctgtagagaacatgctgggcagcctgctgtgtctaccaggctctggttcagtgctg
ctagacccatatggatccaccatctccgagaccaccagcgaggcctggagtgtggaggtc
ctgcccagcgactcagaagccccagacctgaagcaggaggagcgtctacaggagctagag
agctgctcaggggtgggcagcacctccgatgacacagaggtcagagaggtcagctctcgg
cccagcaccccagggctcagcgtcgtctcagcgacatcagaagacatccccaacaagaca
gaggacctgcggtcagagtgcagctcggactttggggggaaggactctgtgaccagtcca
gatggggaggagtcatcccatggagcacatcacagtttggcctctccaccctctcaggct
gactccttactggccatgtttgatccactctcttccggcgaagattcctccactggtacc
atcgtgaggcccaaggtgcactacgccaggccccttcatcctccccctgaccctcccatc
ccagagacctgtgccctgggccaggagccccgctactccctgttcacgccccactgcctg
gcccaagccgagctggagcacaccaagcagcgccactcctacacagacaggctggtacgc
agccgcagctctgacattgtgtgcccaggccgccgacccaccagcgacccgggcctgaac
cgcagggctgcagccgaggagcgggaccatgccggggccttctttatgggtccgttctcg
tctcctagcaaggactccctgaaaggagaggttgaggagagaaaggacagtgatgaggaa
aagtctgatcgcagcagaccgtggtggaagaaacgctttcagtcagccattcctaaagtg
ctgtattggacggctgagagtgaagtcccagctccgatagcagccttacggaaaagggac
aagcaggagaaagacaatatgggccatgaacgtgtcccacaagacgaccctctgttcagg
aactcccaggcccaggcagcagaagacatccttgacaagtacaggaacatcaagaggacc
agtcccagtgaaggagctactgctgcagcctacgacgccacagagttgtgtggagatgag
tgtgtgcacaactcccccagagacgaagctctgcagaacatgtccacagacgacctgcca
gactcagccagccagacagcccagcaacacgattccaacaagttctcattcagtgatgca
aagaagaagttgaggctggccttgtgttcagcagagtctgtggccttccctctcatggct
cctgccaccacacgcaatgggctgcctgaccacacagactttgaagacaacgagatcgtg
tgcttcctgaaggtccagctggcggaggccatcaacctgcaggataagaaccagatggcc
cagatccaggagaccacgcgctgcgtcagccgcttcgacacacgcacctgcaagaagctg
ctggctgccattgctgaggattacaggaagcgggcaccctacatagcgtatctgacgcgg
tgtcggcagggcctgcagacatcccatgcccacctggagaggctgctgcagagggtgctg
agggacaaggaggtggctaaccgctacttcaccacagtctgtgttcgcctcctactggaa
cacatggaggctaagtccctggacttcatcaaagccttccaggggtgcacagcgtcagac
gacaagactgcggcggtggaggacttcctgcgctacctgtacggggccatggcccatgac
gcaatctggcagtatgccagcgaggatcagctgcaggatgcccagatggccatcgagcgc
agcgtcatgaaccgcatcttcaagctggccttctaccccaaccaggacggggacatcctg
agagaccagcttcttcaggaacacatagcacgtctctcaaaagtggtgacagcgaatcac
aaagctcttcaaatcccagaggtgtatgcgagggaggctccctggccgtctgcccagtca
gagatccggaccatcagtgcctacaagacccctcgggacaaagtgcagtgtattttacgc
atgtgttccaccatcatgaatctcctgagtctggccaacgaggactctgtccccggagct
gacgattttgtccctgtgctcgtctttgtcctgataaaggcaaacccgccttgcctgctg
tccactattcagtacatcaataatttctacgccagccggctgagtggggaggagtgctat
tggtggatgcagttcaccgcggcagtggaattcattaagaccatcgacgatcgcaagtga
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