Salvelinus fontinalis (brook trout): 129853533
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Entry
129853533 CDS
T11136
Name
(RefSeq) PDZ and LIM domain protein 1-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129853533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129853533
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129853533
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129853533
NCBI-ProteinID:
XP_055775650
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All DBs
Position
1:34233977..34251955
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AA seq
318 aa
AA seq
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MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRVTHGSRAAQANLCIGDQILAIDGEPTEKM
THLQAQNKIKGCLEEMVLSIDRSESKMWSPLSSEEGKTNSYKMNLASEPQEVKRIGSAHN
RSALPFAGFGPKVVTNQYNNPAGLYSSENIKDFNATVDDVKTISTAANEPSTIPDPSGIL
PPIVADSEVYKMLQENHEADEPPRQSASFKVLQDILESDPDKSSGFKSVKAPATKIGSTV
RNADKLPICDKCGSGIVGMVVKLRDKFRHPECYTCSDCNLNLKQKGHFFVEDQIYCEKHA
RERVTPPEGYDVVTVFPK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcctctacgagttgtcgtgcaaggtcctggaccttggggattccgtctagttggtggg
aaggattttgaacaacccttgactatctctcgggtcactcatggcagtagggctgcacag
gccaatctgtgtatcggggatcagatcctggccatagatggagagcccactgagaaaatg
actcacctgcaggcacagaacaagatcaagggctgcttagaggaaatggttctttctatt
gacagatccgaatcgaaaatgtggtcaccgctctcttctgaggaaggaaagaccaactct
tacaagatgaatcttgcatctgagccgcaggaagtgaaacgcataggttccgcccacaac
aggagcgccctgccattcgctgggttcggccccaaggtggtaaccaatcagtacaacaac
cctgccggtctgtactcctcagagaatatcaaggacttcaacgcgaccgtggatgacgtg
aaaaccatcagcactgctgctaacgaacccagcaccatcccagatccctccggtattctg
ccaccaatagttgcagactctgaggtctacaaaatgctgcaggaaaaccatgaggctgat
gagcctcctcgacagtcagcttcattcaaagtgctgcaggatattctggagtccgatcct
gataagagctctggttttaagagtgtgaaagcgcctgccacaaaaattggctcaacagtg
agaaatgcagacaagttaccaatctgtgacaaatgtggatcagggattgtggggatggta
gtcaagttacgggacaagttccgtcaccccgagtgctacacctgctcagattgcaacctc
aacctgaaacagaagggacattttttcgtggaggaccagatctactgtgagaaacacgca
cgtgagcgagtgacgccacccgaaggctatgatgtggtcactgtctttcccaagtag
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