Salvelinus fontinalis (brook trout): 129853546
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Entry
129853546 CDS
T11136
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00061
Fatty acid biosynthesis
sfon00071
Fatty acid degradation
sfon01100
Metabolic pathways
sfon01212
Fatty acid metabolism
sfon03320
PPAR signaling pathway
sfon04146
Peroxisome
sfon04216
Ferroptosis
sfon04920
Adipocytokine signaling pathway
Module
sfon_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
129853546
00071 Fatty acid degradation
129853546
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
129853546
09143 Cell growth and death
04216 Ferroptosis
129853546
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
129853546
03320 PPAR signaling pathway
129853546
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sfon01004
]
129853546
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129853546
Enzymes [BR:
sfon01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
129853546
Lipid biosynthesis proteins [BR:
sfon01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
129853546
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of breast milk
129853546
Exosomal proteins of breast cancer cells
129853546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
129853546
NCBI-ProteinID:
XP_055775672
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All DBs
Position
4:complement(32246455..32264029)
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AA seq
745 aa
AA seq
DB search
MSNYRLARKHEGGPTGHHAVPPISPPNCYSMHFQEWLQSLRTSGGVRGPVNKDFWSLVPF
LPLSSSFSSLSLSPSSLLGIGALASFTAYWLVTRPRPMRPPCDLNAQSIPVQGEPNWRRS
ALLKDDVLLEFYYEDTRTAYDMFQRGLRVAGDGPCLGFRKPGEPYQWISYTEVAEQAQVL
GSGLLGKGCQPKPAQLVGIFAQNRPEWIISELACYTFSMAVVPLYDTLGEEAMVHILNLA
EISLVICDKEEKAESLLGNKEKGVTPTLSCLVLFNPCSDAIVERGKNCGVEILELTQLME
LGRQNLRDPAPPQPQDLAVVCFTSGTTGKPKGAMITHGNIASNSSSVIKILEGSFVIQQE
DVSISYLPLAHMFERMIQVSMLCHGARVGFYQGDISLLMDDIKTLKPTFFPVVPRLLNRI
YDKILGSVTSPLRRAVLHYAVRRKQAELSSGVVRNNSLWDWLVFNRIQANLGGNLRFILT
ASAPIAPTVLSFLRATLGCLIFEGYGQTECTAGCTFSMPGDWSAGHVGAPLPCAMVKLID
IPDMNYYAKNGEGEICIRGHSVFRGYLKDEEKTTEALDSDGWLHSGDVGQWLPNGTLRII
DRKKHIFKLSQGEYIAPEKIENVYMRCVPVLQVFVHGDSLQSHLIGIVVPDPEVFIDWVK
ERGIFGSYEELCQNPDVKKEVLEDMTAVGKEAGLKSFEQVKDLHLHPEMFSVSNGLLTPT
LKTRRVDIHRVFQEQITNMYSTTAI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattacagactggcaaggaaacatgagggtggacctacaggccatcacgctgtc
cctcccatctcgccaccaaactgttactctatgcattttcaggagtggttacaatccctt
cgtaccagtgggggggttcgaggacctgtaaacaaagacttctggagccttgtccccttt
ctccctttgtcgtcctctttctcctccctctctctatccccgtcctctctgctgggtata
ggtgctctggcctccttcactgcatactggctggtgactcgccctcggcccatgcgcccc
ccttgtgatctgaatgcccagtctatccctgtacagggagagcccaattggaggcgttca
gctttgctcaaagacgatgtcctgttggagttctactatgaggacaccaggacagcctat
gacatgttccagagaggactgagagtggcaggggatggcccatgccttggcttcaggaaa
cctggggagccttaccagtggatctcctacactgaggtggctgaacaggcacaggtgctg
ggctctgggcttttgggcaaaggctgccaaccaaaacctgcgcagttagttggaatattt
gcccagaacaggccagagtggatcatttcagagctggcctgctacaccttctctatggct
gtggtgcccctgtatgacacacttggagaggaggccatggtgcatatccttaacctggct
gagatctccctggtgatctgtgacaaggaggagaaggcagagtcccttctggggaataag
gagaagggtgtgacgcctactctctcctgtctggtgctcttcaatccctgcagtgatgcc
atagtggagagggggaagaactgtggagtggagattctagaactcacacagctcatggaa
cttggacgacagaacctcagagatcctgcgccaccccaaccccaggacctggcagtcgtg
tgcttcaccagtggaaccacaggaaagcccaagggagccatgatcacccacggcaacatc
gcctccaattcctcctctgttattaagatcctggaggggtcatttgtaattcagcaagag
gacgtgtccatatcttacctacctcttgcccacatgtttgagaggatgattcaggtgtcc
atgctatgtcatggggccagggtaggattctaccagggggatatctccctgctcatggac
gatattaagactctgaaacccaccttcttcccagtggtgcctcgcctgctcaaccgcatc
tacgacaagatcttaggctccgtgacgtccccattacgccgggcagtgctgcactatgca
gtgaggaggaagcaggctgagctcagcagtggggtggtacgtaacaacagtctgtgggac
tggctggtgttcaacaggattcaggctaatttaggaggtaatctgaggttcatcctgacc
gcctctgcgcccatcgcccccaccgtgctctccttcctcagggccaccctcggctgtctg
atcttcgagggctacgggcagactgaatgcacagcaggctgcaccttctccatgccaggt
gactggagtgcaggccatgttggtgctccattgccctgtgccatggtgaagttgattgat
attcctgatatgaactattatgccaagaacggagaaggagagatctgtatccgtggccac
agtgtgttccggggatacctgaaagatgaggagaaaacaacagaagccctggacagtgat
ggctggctgcacagtggagacgtgggccagtggctaccgaatgggacacttcgcatcatc
gacaggaagaagcacatcttcaagctgtcccagggagagtacattgcccctgagaagatt
gagaatgtctacatgcgttgtgtccctgtgctacaggtctttgtgcacggagacagccta
cagtctcacctgatcggtattgttgtgccagacccagaagtgttcattgactgggttaag
gagaggggaatctttggatcctatgaggaactctgccagaatccagatgtgaagaaagaa
gtgttagaagacatgacagccgtggggaaggaagctgggctgaagtcatttgagcaggtg
aaggatctgcacctgcatccagagatgttcagtgttagcaacgggctcctcacccccact
ctgaagaccagacgagtggacatccacagagtcttccaggaacagatcacaaacatgtat
agcacaacagccatctag
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