Salvelinus fontinalis (brook trout): 129853567
Help
Entry
129853567 CDS
T11136
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 2-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129853567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129853567
Membrane trafficking [BR:
sfon04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
129853567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
129853567
NCBI-ProteinID:
XP_055775709
LinkDB
All DBs
Position
4:complement(32791921..32807585)
Genome browser
AA seq
1672 aa
AA seq
DB search
MSLADQSQQWYPTSVQVTVFQARNLRIKGKNGTNDAYAIMQVAKDKFSTSVAEKCVAPVW
KEEATFDLPLFHHGNAERCTLYIIVMHRALVGLDKLLGRAVINLLDLHDNSARKKTDWHK
LLDKNGKEDKVRGEVMLDIQFMRNNLTASMFDLSMKDKPRSRIGKLKDKVRGKKKDSFSD
SASAIVPSFSQVVTDSEGEADSHSVCPESPGAKKKSKLKSLFAPKSNLQRNVSQSMSTLG
TLPEKNASLSGSRSSGLNVDSPDVKKKFKFLGHKRTDSNDSKVSTGPFSLLGRSKQKEDP
NSTCINGNHVYAEEVEPMSGSTLSLNSSGQGSVEDVRSHRQPSDAAIDSLKGASVNTYRK
ESADRDRALLEQRHLQEEGEKRQAEEKRHNEEKQKVQLKVLQEEARKQQEEQERRMFQEG
EARKKQQEEEEDRKRLAEERRRLKADELQRLGEEQRQQEEAKKAEEQKQQEEASVTERLS
SLFGMIRKKEEKKEELQQSVANEVRPNPSPSRGTRDLEVPVPAPRHAANPFKDILLSPDP
PIPFEESPVDHQKGVCGTNTPSTAVFNSNRTAKVSAVKPRXPETPNSDSHRQQSLSLSCA
ESPLSSVPSESPDMFSNLHSSLAPPKTRSGTSESPCSSTENLAAMGSSPIRSERKRPAPL
PPSPMEQHSHVNPNAGSRSVSAKCGSLVTIKEVEAKTPPLPLPDYDRLFPQKRHGVQGQT
QWDNIIAEVNQRQQEYTSQLIGEEMSVDGPGLDSPAPPHNDKYSYLKERAAERLNQQQTQ
VQEVQSSSWRRVGPNSLPALIPPPKPGAAAPPRLVIDSNKKQSQSTAQANPSVERHNAFV
SKVLGSTNPMARSSNVPSVKPWEDARKVPKTSVALASEGHSVLPIEKPTRLTLREVLVSS
CTDVPKGLPNTLKDLPVIKPRQRLTSKEPVRRVDPEPKAAESTTNVQQENRSEMRAASTL
DFIDMRVSIPVMAKNTEVTANSEKQPSPDSVESDINKKQLERIMKETFSEPDPFPIAEVL
PKYPWAQLEQSHSGDDLFSGGPQKEDKLEELGMKTDDLDKHFTPNNSTDPSSSCNDSDSE
KHQEEEKPEEPIPTFQRGFSQRKKERADFNPPAPPLNDKYSYLQERAAEQLNQQQTQVQE
VQSWRRVGPNSSPELIPPPKPHRLEADSNKKQSQSTAQNNPFVERHSTFVSKVLVSTNPM
AQSRDVPSVKPREDARKVLNTSVSSANDGKSVLPIEKPNRPAPQVLVSSSTDEPKGLPDT
PKEIPSAKLRQSLDSKEQADPEVTSAEHTTVQQENRSEMRAVSTPDIMESSPTMAKATDS
VEGDINKKQLELIMKETFDDPFPIAEILPKDPWAEPEQSHNGDDLFSGGPQKDDKLEQRL
TTDDLVKLFVPNNPTDLFSSCNDSDSEKHLEEEKPEEPSPAFQRVFSQRKNKRAAPQPPA
NSSNKGAMGKGELVKRDPSPRENETIRLATTGSVKLEPQAKNTRQRNLYGKEKVETQARK
EKWTADPFTFSRMSSDLTSPEPPQSVGEPNPQAGAEGKTLLRAWVSTSEVQPLTVLSSNG
DRPALTPIRPHPVKPMSSMESHALINTPVVREMKTYDSSLGNMKAPCKVESGPYTQLTQE
ELITLVVKQQTELSKKDSKIVELEEYIDNLLVRVIEEKPSILQGLTSPKQAL
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggctgaccaaagtcagcagtggtatcccacaagcgtacaggtgaccgtgttc
caagctaggaatttgaggatcaaaggaaagaatggaaccaacgatgcctatgccatcatg
caggtggccaaagacaagttttctacctcggttgccgaaaaatgcgtcgcaccggtatgg
aaggaagaggcaacgtttgacctgccactgttccaccatggcaatgctgaacgctgcaca
ctgtatatcatagtaatgcacagagctctggtgggactggacaaactcctgggacgagct
gtgatcaacctactggatctacacgataacagcgcccgcaaaaagaccgattggcacaaa
ctgctggataagaatgggaaggaggacaaggtcagaggggaagtgatgttggacatccag
ttcatgagaaacaacttgacagccagcatgtttgacctttccatgaaagacaaaccacgc
tcccgcatcggaaagctcaaggacaaagtgcgtgggaagaaaaaggacagcttctctgac
tcggcctctgcaatagtgccctctttcagccaggtagtcactgacagcgagggagaggct
gactcccactcagtgtgcccagagtctcctggggccaagaagaaatccaagctcaagtcc
ctctttgcccctaaatccaacctgcagcgcaatgtctcccagtccatgtccacactgggc
actcttcctgagaagaacgcatccctcagtggcagtcgctcttctggcctcaatgtggat
tctcctgatgttaaaaagaaattcaagttcctgggccacaagcgcacagacagcaatgac
agcaaagtgtctacaggacctttttctcttctgggcagatccaagcagaaagaagacccg
aacagcacgtgcatcaacggcaatcatgtgtatgcagaggaagtagaacccatgtctggg
tccaccctcagccttaacagctctggtcagggctcagtggaggatgtacgaagccacagg
caaccatctgatgccgccatagactccctcaagggtgcctctgtcaacacctacagaaag
gagtctgcagatagggatagggctctgctggagcaaaggcaccttcaggaagagggagag
aagaggcaggcagaggagaagaggcataatgaggagaaacaaaaagtgcagctcaaggta
ctgcaggaggaggcacgcaagcaacaggaggagcaggagaggagaatgttccaggagggt
gaggcaaggaagaagcagcaggaagaggaggaggaccggaagcggctagcggaagaaaga
aggcggctgaaggcagatgagcttcagaggctgggggaggagcaaaggcagcaggaggag
gccaagaaggcagaggagcagaaacaacaggaggaggcctctgtgactgagaggctgtcc
tctctgtttggtatgatcaggaagaaggaagagaagaaggaagagctgcagcagagtgtc
gccaatgaggtgaggcccaacccatctcccagtcgcggcaccagagatttggaggtccct
gttcctgcccctcgccatgctgccaacccattcaaggatattctcctcagtccagaccct
ccaatcccatttgaggagagcccggtggaccaccagaagggtgtttgcggcaccaacacc
ccgagcactgcagtcttcaactccaaccgcactgccaaggtgtctgcagtcaagcccagg
tagcctgaaacccccaactcagactcccataggcaacaatctctctccctgtcctgcgcc
gaatcccctctctctagcgtcccttctgagtctcctgatatgttctccaaccttcactcc
tccctggctccacctaagacacggagcggcacctctgaatccccctgcagcagcactgag
aacctggctgccatgggatcttcccctatcagatctgagaggaagcggccagctcctctg
ccccccagcccaatggaacagcatagccatgtaaatcccaatgcaggctccagaagtgtg
tctgctaaatgtggctctcttgtgacaattaaggaggttgaggccaaaacacctcctcta
cctcttcctgactatgatcgcctgttcccacagaagaggcatggagtacaaggacagact
caatgggacaatatcattgcagaagtgaatcagagacagcaggaatacacatctcagctc
attggagaagagatgagtgtggatggcccaggcctcgactccccagcacctccacacaat
gacaaatattcatacttgaaggagagggcagcagaacgccttaaccagcaacagacacaa
gttcaggaagttcaatcttcgtcttggaggagagtggggcccaacagtttgccagcgctc
atcccccctcccaaacctggagctgcagccccccctagactagtgatagactcaaacaaa
aagcaaagccagagcactgcacaggctaatccatctgttgaaagacacaacgccttcgtc
tccaaagtcttgggctctacaaatcctatggctcgaagcagcaacgtaccctcagtgaaa
ccttgggaggatgcaaggaaggtgcctaaaacatcagttgctttagccagtgaaggccat
tctgttctcccaatagaaaagcctactagacttacattaagagaagttttggtgtcaagt
tgtacagatgtacctaaaggactgccaaacactctcaaagatctccccgtaatcaaaccc
agacaaaggttaaccagcaaagagccagtgagacgagtggatcctgagccaaaagcagca
gagtctactaccaatgtacagcaggagaacaggtcagaaatgagggcagcctccacactg
gacttcatagacatgagagtgagtattcctgtcatggcaaagaacactgaggtaactgct
aacagtgaaaagcaaccctcacctgactctgtagaaagcgacattaacaaaaaacaactg
gaacgtattatgaaagagacattttctgagcctgacccttttcccattgcggaggtcctg
cctaaatacccatgggctcaactagagcagagccacagtggagatgacctgttctctgga
ggaccacagaaagaggacaagcttgaagaactgggaatgaaaactgatgacttggataaa
cattttaccccaaacaattcaacagatccgtcctccagttgtaatgacagtgactcagaa
aagcatcaagaggaggaaaaaccagaagagcccattcctacttttcaaaggggattttcg
caaaggaaaaaggaacgcgcagacttcaaccccccagcacctccacttaatgacaaatat
tcctacttgcaggagagggcagcagaacagctaaaccagcaacagacacaagttcaggaa
gttcaatcttggaggagagtggggcccaacagttcaccagagcttatcccccctcccaaa
ccccatagactagaggcagactcaaacaaaaagcaaagccagagcactgcacagaataat
ccattcgttgaaagacacagcaccttcgtctccaaagtcttagtctctacaaaccctatg
gctcagagcagagacgtaccctcagtgaaacctcgggaagatgcaaggaaggtgcttaac
acatctgtttcgtcagccaatgatggcaaatctgttctcccaatagaaaagcctaacaga
cctgcaccacaagttttggtgtcaagttctacagatgaacctaaaggactgccagacact
cccaaagagatcccctcagccaaactcagacaaagtttagacagcaaagagcaagcagat
cctgaggtaacatcagcagagcatacaactgtacagcaggagaacagatccgagatgagg
gcagtctcaaccccggacatcatggaaagtagtccaacgatggctaaagctactgactct
gtagaaggagacattaacaaaaaacaactggaactcattatgaaagagacgtttgatgac
cctttccccattgctgagatcctgcctaaagacccatgggccgaaccagagcagagccac
aatggcgatgacttgttctctggaggaccacagaaagacgacaagcttgaacagagactg
acaactgatgacttggttaagctttttgtgccaaacaatccaaccgatctgttctccagt
tgtaacgacagtgactcagaaaaacatctagaggaagaaaaaccagaagagcccagtcct
gcttttcaaagggtattttctcaaaggaaaaataaacgagcagcacctcagcctccagct
aattcgagcaataaaggagccatgggaaagggtgagctggttaaacgagacccttcaccc
agagaaaatgagacaatcaggttagccactacaggatctgtcaaacttgagcctcaagcc
aaaaatactagacagagaaatctctatggtaaagaaaaggtagaaacccaagccaggaaa
gagaagtggacagcagacccttttaccttctcccgcatgtcttctgacttgacttctcct
gagcctccccagtcagtaggtgagcccaacccccaggcaggggctgagggtaagaccctg
ctacgggcctgggtctcaacctctgaggtgcagccactcactgttctgagtagcaatgga
gatcggccagccttaacaccaatcaggcctcacccagtgaagcccatgagctccatggag
agccatgctctcatcaacaccccagtggtgagagagatgaagacctatgacagctcactg
ggaaatatgaaggcaccttgtaaggtggagagtgggccctacacccagctgacccaggaa
gagctgattaccctggtggtgaagcagcaaacggagctctccaagaaggactccaagatc
gttgagttggaggagtacatagacaacctgctggtgcgcgtcatcgaggagaagcccagc
atcctgcaaggcctcacctctcccaagcaggccctgtga
DBGET
integrated database retrieval system
