Salvelinus fontinalis (brook trout): 129853620
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Entry
129853620 CDS
T11136
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129853620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129853620
Spliceosome [BR:
sfon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
129853620
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Terminase_5
Motif
Other DBs
NCBI-GeneID:
129853620
NCBI-ProteinID:
XP_055775814
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Position
4:34990172..34997804
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AA seq
496 aa
AA seq
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MVSVKRERELDLDDDEATVPVKVGRSSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSH
INVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDIT
YVLKPTFTRQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPLR
NYFLEEENYCGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKN
FQITKQGDAVDFLSWFMNALHGALGGTKKKPSSLTKVFQGSMRIFSKKLPHPDLPPEEKV
ALLLKEEYQEEMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEYK
TYKENFLKRFQLLKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQVT
EKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQI
WKRRENEDDTTNHTGA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgtaaaacgggagagagaacttgacttggatgacgacgaagctacagtgcct
gtgaaagttggccgttcatccgaggatcgcagaagtcgccactgtccctacctcgacaca
atcaataggagtgtgcttgactttgattttgagaagctgtgctccatctcgctctcccac
atcaacgtctatgcttgtctcatctgtgggaaatacttccaaggtagaggtctgaagtcc
catgcctatactcacagtgtgcagttcacccaccatgtgttcctcaatctgcacacactt
aagttctactgtctgccagataactacgagatcattgactcatcgctggaagacatcacg
tatgtactgaagcccacattcaccagacagcacatctctggattggacaagcagggcaag
ctgtatcgagcctatgatggcaccacctatctgcctggcatagtggggctcaacaacatc
aaggctaatgactacgctaatgtggtgctgcaggccctgtccaatgtgcccccactgcgg
aactactttctggaagaggagaattactgcggcatccgtaggccacctggtgacatcatg
ttcctgctggtgcagcgattcggtgagctgatgcgcaagctgtggaacccccggaacttc
aaggcccatgtgtcaccccacgagatgttgcaggccgtagtgctgtgtagcaagaagaac
ttccagatcaccaagcaaggggatgctgtggactttctgtcctggttcatgaacgctctg
cacggtgcactgggaggaaccaagaagaaaccttcaagcctcaccaaagtgttccaaggt
tccatgcgtatattttccaagaagcttcctcacccagatttgccaccagaagagaaggtg
gctctgctgttgaaggaggagtaccaggaggagatgtcggagtccaccttcctcttcctg
acccttgaccttcccacagccccactgtacaaggatgagaaggagcagctcatcatccca
caggttcccctcttcaacatcctggccaagtttaacggcaacacagagaaggagtataaa
acctacaaagagaatttcctcaaaaggttccagttgctcaagctgcctccctatctcatc
ttctgcatcaagaggttcaccaagaacaacttctttgtggagaagaaccccaccatcgtc
aactttcccatcacgaacgtagaccttcgtgagtacctgacagaagaggcacaggtcaca
gagaagaacaccacctatgacctggtggccaacgtggtgcacgatgggaagcccactgag
ggggcatacagaatacatgtcctgcatcatggaactgggaagtggtacgagctccaggac
ttgcaggtgacagatatcctgccccagatgatcacactgtcggaggcatacattcagatt
tggaaaagaagagagaacgaagatgacacaactaaccacacaggggcgtga
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