Salvelinus fontinalis (brook trout): 129853654
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Entry
129853654 CDS
T11136
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129853654
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129853654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129853654
Spliceosome [BR:
sfon03041
]
Common components
Common spliceosomal components
SR proteins
129853654
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
129853654
NCBI-ProteinID:
XP_055775913
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All DBs
Position
4:36372697..36385174
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AA seq
258 aa
AA seq
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MADGRIYVGNLPADVQERDIEDIFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDCKLRVEHPRSASSKFNGSMGGSGRGSGDGGPGGPKGRFGPPTRRSEFRVIV
TGLPPTGSWQDLKDHMREAGDVCFTDVQRDGEGVVEFLRREDMEYAMRRLDRTEFRSHQG
ETSSIRVHGEMGASRGRSRSRSRSRGRYSPAYQGRGSPPPRYQSPPARRLSRHSPPPRRS
SAAHRSPSSRSPPPRHYR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggcaggatctacgtgggtaaccttccagctgatgtgcaagagagggacatt
gaggatatattcttcaaatatggcaaaatcagagacattgagttgaagaacaacagaggc
actattccctttgcctttgtgcgctttgaagatccacgggatgccgaggatgcagtctat
gggaggaatggttatggatttggagactgcaagcttcgcgttgagcaccctcgctctgcc
tcctcaaaattcaacggttctatgggtggtagtggtcgagggagtggggacggaggtccc
ggtggtcctaaagggaggtttgggcctcctactcggagatcagagttcagagttattgtg
actggcctgcctccgactgggagctggcaagacttgaaagatcacatgagggaggctgga
gatgtttgtttcacagatgttcagcgggatggggaaggggtggtggagttcctgcgcaga
gaggacatggagtatgccatgcggcgcctggacaggacagagttcagatcacaccagggg
gagacttcatctatccgagtccatggagagatgggggccagcagaggacgctcgcggtcc
cgttccagatccaggggacggtactcacccgcttatcaaggtcgcggctctccaccccct
cgttatcagtcgccccctgctcgcagattgtctcgccatagcccccctccacgtcgctcc
tctgcagcacaccgtagcccatcaagccgcagcccaccccctcgtcactaccgatag
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