Salvelinus fontinalis (brook trout): 129853668
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Entry
129853668 CDS
T11136
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129853668 (tfip11)
Spliceosome [BR:
sfon03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129853668 (tfip11)
Other components
Complex C specific factors
129853668 (tfip11)
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
129853668
NCBI-ProteinID:
XP_055775956
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Position
4:36713985..36721773
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AA seq
841 aa
AA seq
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MSMSHLYGRQGEEEDEGVEVEKFEVTEWDLANEFNPERRRHRQTKEEAVYGIWAERGDSD
DERPSFGGKRSKDYSAPVSFVSAGLRKSAAEEKQQQQIGGGSDDSDNDNTPPAQPPPRDT
APKKLQTGGNFRGNSQSQRTGFAAGIRAGGDLGTWEKHTKGIGQKLLQKMGYVPGKGLGK
NAQGILNPIEAKLRKGKGAVGAYGNERTKQSLQDFPVVDSEEEEEKEFQRELGQWRRDPA
GGGGKKKPKYSYRTVEELKAKGKLAGRTTQTPAGELAQVKVIDMTGREQKVYYSYSQMTN
KLSVPEEAPLSVATREQKTSGFALPELEHNLQLLIDLTEQDILQSSRRLQHERDVVVTLS
HESSGLQTRIGTERDAIQRLEAVLQLVDRFQSGETAPGVGPSLQECAGVFETLQSEFYEE
YKTLGLGDLAAAVVHPLLREKLRTWDPLKDSSYGLEEVGQWRAILESDQLHHANAPEAHM
DPYHRLLWEVWIPVLRVCVSGWQPRMVGPMVDCVEVWAPLLPLWILNHLLEQLLFPRLQR
EVDSWNPLTDTVPIHSWLHPWLPLLQSRLEPLYPPIRSKLANALQRWHPSDDSARLILQP
WRDVFTPGAWEAFMVKNIIPKLALCLGELVINPHQQQMEPFNWVLDWEGMLSPSSLVSLL
DKHFFSKWLQVLCSWLSNSPNYEEITKWYLGWKSIFSDAVLAQPLVKDKFNEALDIMNRA
VSSGLGGGYMQPGARENIAYLTHTERRKDFQYEALQERRDAESVAQRGIGASLPTNFKDL
IQTKAEENNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMA
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccacctgtacggacggcagggagaggaggaggatgagggggtggaggta
gagaagtttgaggtgacagaatgggacctggccaatgagtttaacccggagcgccgaaga
cacagacagaccaaagaagaggctgtctatggcatctgggcagagaggggagactccgac
gatgagagacccagcttcggagggaagaggtctaaggactactctgcccctgtgagtttt
gtgagtgctgggctgcgcaagtctgcagcagaggagaagcaacagcagcagataggtgga
gggtcagatgactctgacaatgacaacactcctcctgcccaacccccaccccgcgacact
gcacctaagaaactgcagacgggcggtaatttccgtggcaatagccagtcccagaggaca
gggtttgcggccggtatccgagctggaggagacttgggcacttgggagaaacacaccaag
gggattggccagaaactcctccagaagatgggctatgtaccagggaaaggactggggaag
aatgcccagggtattttgaaccccatcgaggcaaagcttcggaagggaaagggggcggtg
ggcgcctacggcaacgagagaaccaaacagtcactacaggacttccctgtggttgactcc
gaggaggaggaggagaaggagttccagagggagctaggtcagtggcgtagggaccctgca
ggtggtggagggaagaagaaaccaaagtattcctacaggactgtagaggagctgaaggct
aaaggcaagctagctggacggaccacacagacacccgctggagaactggctcaggtcaag
gtgatagatatgacaggcagggaacagaaggtgtattacagctacagtcagatgactaac
aaactcagtgtaccagaggaggctccactgagcgtggccacacgtgagcagaagacgtct
ggctttgccctgccagagctggaacacaacctgcaactactgatcgacctgactgaacaa
gacatactacagtcctcacggcgtctgcagcatgagcgtgatgtggtggtgactctaagc
cacgagagctccggtctgcagacgaggatcgggacggaacgggatgccatccagaggcta
gaggcagtactgcagcttgtggatcgctttcagagcggggagactgcacctggggtagga
cccagcctgcaggagtgtgctggcgtttttgagactctacagagtgagttctatgaggag
tacaagactttaggtttgggagatctggctgcagctgtagtacatccactactcagagag
aaactacgcacatgggatcctctcaaggacagttcatatggtctggaggaggtgggtcag
tggcgagccatcctggagtctgatcagcttcaccacgccaacgcccctgaagcacacatg
gacccctaccacaggctgctgtgggaggtgtggatccctgtgctgcgagtgtgtgtgtcg
gggtggcagcctcgtatggtaggacccatggtggactgtgtggaggtctgggcccctctg
ctgcccctctggatactaaaccacctcctggaacaactcctcttccccaggctgcagaga
gaggtggatagctggaaccccctgaccgacacagtgcccatccactcctggctccacccc
tggctgcctctgctccaatcacgtctggagcctctctacccgcccatccgcagtaaactg
gccaatgcgctgcagcgctggcacccgagtgacgactctgcccgcctcatcctccaacca
tggagagacgtgttcacgcccggtgcctgggaggccttcatggtcaaaaacataatccct
aaactagctctgtgtctgggggagctggtaataaatcctcaccagcagcagatggagccg
ttcaattgggtgttggactgggagggcatgctgtctccctccagcctcgtatcactgctg
gacaaacacttcttctccaagtggctacaggtgctgtgttcgtggctcagtaacagtcct
aactatgaggagattacaaagtggtacctgggctggaagtccatattcagtgatgctgtt
ctggctcagccactcgttaaggacaagttcaacgaagctctggacatcatgaaccgcgct
gtctcctctggccttggtggggggtacatgcagcctggtgcccgtgagaacatagcatac
ctcacacacacagagcgtcgtaaagacttccagtacgaggctctgcaggagcgccgggat
gctgagagcgtggcgcagcgaggcatcggtgccagcctgcccaccaacttcaaagacctg
atccagaccaaggctgaggagaacaacattgtcttcatgccgctggttgccaaacgccac
gagggcaaacagctgtacacctttggacgtatcgtcatctacatagacagaggagtggtc
ttcgtacagggagagaagacctgggtccctacgtccctacagagtctcatagatatggcc
aagtga
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