Salvelinus fontinalis (brook trout): 129853774
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Entry
129853774 CDS
T11136
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129853774
04518 Integrin signaling
129853774
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129853774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfon00536
]
129853774
Glycosaminoglycan binding proteins [BR:
sfon00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129853774
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_PBP1
Fn3_Dep-1_3rd
DUF7949
Fn3_Dep-1_2nd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF_PEAR1L
EGF
NDNF
hEGF
FN3_Tor_3rd
Actin
SPE9_EGF_3rd
REJ
Motif
Other DBs
NCBI-GeneID:
129853774
NCBI-ProteinID:
XP_055776137
LinkDB
All DBs
Position
4:40899024..41017209
Genome browser
AA seq
1602 aa
AA seq
DB search
MVMKGLLLGCVTVTVLLQLSSAGLVKKIIRHRRETLRDPSENMTLPHPDQPVIFNHIYNI
NVPSSSLCSVDVESPGGTEIKPKGSPVQSDMQTTEHLEHTVDGENQIVFTHRINIPKQAC
GCDNHMHDMKDILSRLEMLESELSSLREQCGSGTSCCGAQITGEVATKPYCNGRGNFSTE
TCSCVCEPGWKGPNCTEPECPNFCQDQGRCIDGKCVCFEGFDGDDCSMELCQVDCGDNGE
CIDAMCICEEGFTGNDCSQTNCLNNCLGRGRCVDDECVCDEPWTGYDCSELICPNDCYDR
GRCVNGTCFCEEGFTGVDCGEPICPSNCNNRGVCVNGQCVCHSGYSGEDCSKLTCPNDCT
ERGHCFNGRCICDPGFEGVDCSILSCPDNCSNRGQCVNGECVCNAGFEGEDCSEISCPMK
CLNQGSCVNGECVCSKGFAGDDCSIKTCPKDCLGHGECVDGKCVCFVGFTGKECSELTCP
NNCLNRGHCVNGQCVCNQGFAGEDCNEKTCPNNCLERGYCVDGKCVCFEGFQGLDCSLLT
CPGDCEDQGKCMNGVCLCNEGFIGEDCSEVSPPKDLTVLEVTPETVDLSWVNEMQVSEYL
VTYVPTALGGLELDMRVPGDKKTATISELEPGVEYLISVFAVLNNKRSVPVSARVATHLP
EPEGLKFTSVRETAVEVQWDPLDIPFDGWNLIFRNTKEENGEILNSLGSPDTMFEQSGLG
PGQEYEVKLEVVKNNSSGPPARKNVFTKIDSPREVDVRDVTDTTALVTWFLPVAIVDGVS
VTYGPNDNPSDRNTVELSSSDTQYHLGSLNPDTEYEVSLMAKRGEMTSVPVSENFLTDLD
APRDLQAVELTDESITLEWKNSQAKVDNYRIKYGPLSGGDHGELLFPTGPLDTTQAKISG
LRPGTEYGMGVTAVKSERESLPTTTNAVTALDAPKNLEVESSTETQLVLVWQKPVAKIDK
YKLLYVSADGYRAELTPFSNDIKFTLRNLTPGMLYTITLTAERGHKQSGPATISAATEAE
PIVEYLLVSDVTSDSCKLAWSAEEDLFDSFVIMINDTNDDLASPQEVVVPGEERTTVLTE
LTEDTEYKIELYGVISGQLSNSISVVAKTGLGTPTGIRFSEVTDTSATVHWAIPRARVDS
FRVTYVPAQGGAPKTVTVGGTETQTVLPNLTPGVTYQVSVISVKGQKESEPGSSSVTTAL
DKPRGLTAVNITDTQALLHWQPAIATVDGYVITYSADTVSPVMERVSGNIVEFEMSSLTP
ATHYTVKVYAMRAAAKSAVTTTEFTTDVDAPQDLAVSNIQTENAMLTWKAPRADITGYIL
SFESADGTIREVVLSPTATSYNMAQLSASTEYSVRLQAIAGPKRSRVVTTVFTTIGVLYK
HPRDCSQALLNGDTASGVHTIYLGGDESQPIQVYCDMDTDGGGWIVFVRRQSGKLEFFRN
WRNYTAGFGDTNDEFWLGLSNLHKITVAGQYELRVDLRDKGDVAYAQYDKFSVSDPRSRY
KVHVGGYSGTAGDSMTYHHGRPFSTYDHDNDIAVTNCALSYKGAFWYKNCHRVNLMGRYG
DDSHSKGVNWFHWKGHEHSIEFAEMKIRPSNFRNFEGRRKRS
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgaaaggcctgctcctaggctgtgtgaccgtgaccgtgttgctccagctctcc
agcgccggcctggtcaagaagatcatccgccaccgcagagagaccctgagagacccctct
gagaacatgaccctgccccaccctgaccagccagtgatcttcaaccacatctacaacatc
aacgtcccctccagctccctgtgttccgtagatgtggagagccccggaggaaccgagatc
aagcccaaaggaagtccagtccagtcggacatgcagaccacagagcacctggagcacacg
gtggacggggagaaccagatcgtgttcacccaccgcatcaacattcccaagcaggcgtgc
ggctgtgacaaccacatgcacgacatgaaggacatcctgagcaggttggagatgctggag
tctgagctgtccagcctcagagaacagtgtggcagtggaaccagctgctgtggagctcag
attacaggtgaggtggccaccaagccttactgtaacggccgtggtaacttcagcactgag
acctgcagctgtgtgtgtgagcccggctggaagggacccaactgcaccgagcctgagtgc
cccaacttctgccaggaccaggggcgctgcatcgacggcaagtgtgtctgcttcgagggc
ttcgatggagatgactgcagtatggagctgtgtcaggtggactgtggggacaacggggag
tgcatcgacgccatgtgtatctgtgaggaaggcttcacagggaacgactgctcccagacc
aactgcctgaacaactgcctggggcgtggccgctgcgtggacgatgagtgtgtgtgtgac
gagccgtggacgggctacgactgctccgagctcatctgtcccaacgactgctacgaccgc
ggccgctgcgtcaacggaacctgcttctgcgaggagggctttaccggagtggactgtggg
gagcctatctgccccagcaactgtaacaaccgcggggtgtgcgtcaacggccagtgtgtg
tgtcactccggctacagcggggaagactgctccaagctcacctgccccaatgattgtact
gagagaggccactgtttcaacgggaggtgcatctgcgacccaggcttcgagggagtggac
tgttccattttgtcctgcccagacaactgcagcaacagaggccagtgtgtcaatggagag
tgtgtctgcaatgcaggattcgagggcgaggactgttctgaaatctcctgccctatgaag
tgtctgaaccaagggagctgtgtgaacggagagtgtgtgtgcagtaaaggcttcgcgggg
gatgactgcagcatcaagacctgccccaaagactgcctgggacacggcgagtgtgttgac
ggcaagtgtgtgtgctttgtgggcttcacaggcaaagaatgcagcgagctgacttgtccc
aacaactgtctgaaccgtggccactgtgtcaatggccagtgtgtgtgcaaccagggcttt
gctggggaggattgcaatgagaagacgtgtcccaataactgcctggagaggggttactgc
gtggacgggaagtgtgtgtgcttcgagggattccagggcctggactgttctctgctgacc
tgtccaggagactgcgaggaccaggggaaatgtatgaacggagtgtgtctgtgtaacgaa
ggcttcatcggagaagactgctctgaggtgtctccacccaaggacctgacagtgctagag
gtcaccccggagacagtggacctctcctgggttaacgagatgcaggtgtcagagtacctg
gtcacctatgtgccaaccgcccttggaggcctggagctggacatgcgtgtgcctggggac
aagaagactgccaccatcagtgagctggagcctggtgtggagtacctgatcagtgtcttc
gctgtcctcaacaacaagaggagtgtccctgtcagtgccagggtggcaacacatctccct
gagcctgagggactcaagttcacatcagtgagggagactgcagtagaggttcagtgggac
ccgttggacatcccctttgatggctggaacctcatcttcagaaacactaaagaggagaac
ggagaaattctgaactccctgggcagccctgacaccatgtttgagcagtctgggctggga
cctggtcaggagtacgaggtcaaactggaggtggtgaagaacaactccagcggaccccca
gcacgcaagaacgttttcacaaagattgattcgcccagagaggtggatgtgcgtgacgta
acggacaccacagcgctggtgacctggtttctgccggtggccatagtggacggggtgagc
gtgacctacgggcccaacgacaacccctcagacaggaacacagtggagctgtcctccagc
gacacacagtaccacctgggcagcctgaaccctgacacagagtatgaggtgtctctcatg
gcaaagaggggagagatgactagtgttcctgtgtctgagaacttcctaacagacctggat
gccccgcgggatctgcaggcggtagagctgactgacgagagcatcactctggagtggaag
aacagccaggctaaagtagacaactaccgcatcaaatacggccccctctctggaggagac
cacggggagctgctgttccctaccggacccctggacaccacccaggccaagatcagtggc
ctgagacctgggacagagtatgggatgggagtgactgccgtgaagagtgagcgtgagagc
cttcctaccaccaccaatgccgttacggcattggatgcgcctaaaaaccttgaggtggag
tcttccactgagactcagctggtgctggtgtggcagaagccggtggctaagatcgacaag
tacaagttgctatatgtgtcagccgacgggtacagggctgagttgacgcccttctccaat
gacatcaagttcaccctgaggaacctgacgcctggcatgctgtacactataaccctgacc
gctgagaggggacacaagcagagtggccccgcaaccatctcagcagcaacagaagctgaa
cccatcgtggagtatctcttggtctccgacgtcacatcagacagctgtaaactggcctgg
tcagcggaagaggacctctttgatagttttgtcattatgatcaatgatacaaacgacgac
ctcgcttctccgcaagaggtggtcgtgcccggggaggagagaacaacagtgcttactgag
ctaactgaggacacagagtacaaaattgagctctatggagtcatttcgggacagctctcc
aattctatttccgtggtggcaaaaacaggactgggcacacccacgggcatccgcttctct
gaagtcactgatacctctgccaccgtacactgggcaatccccagagctcgagtggacagc
ttccgtgtcacttatgtccctgctcagggaggcgctcccaagactgtgacagtgggtgga
actgagactcagaccgtgctgccaaacctgacccctggagttacctaccaggtgtccgtc
atttctgtgaagggacagaaggagagtgagccaggctccagcagcgtcaccacagctctg
gacaagccccgtggtctaaccgcagtcaacatcactgacactcaggctctgctccactgg
cagcctgccatcgccactgtagacggatatgtcatcacctacagcgcagacactgtttcc
ccagtgatggagagagtgtctgggaacattgtcgagtttgagatgagctccttgacccct
gccacccactacactgtcaaggtctatgccatgagagcggctgctaagagcgccgtcacc
acaactgagttcaccactgatgtggatgcccctcaggacctggcagtcagtaacatccag
acagagaacgccatgttgacttggaaggccccacgcgctgacatcaccggctacatcctc
agcttcgagtcagctgacggcacaatccgggaggttgtcctgagccccacagccacctcc
tacaacatggcccagctgagtgcctccactgagtactccgtcagactgcaggccatcgca
gggcccaagaggagcagagtcgtcaccaccgtcttcaccaccattggcgtgctgtacaaa
caccctagggactgctcccaggccttgctgaatggagacactgcttctggtgttcacacc
atctacctgggtggagatgagagtcagcccatacaggtctactgtgacatggacacggat
ggaggtggatggattgtgtttgtccgacgccagagcggtaaactggagttcttccgcaac
tggaggaactacactgctggctttggtgacacgaacgacgagttctggctcggcctgtca
aacctccataagatcacagtagcaggacagtatgaactccgtgtggacctcagagacaag
ggggatgtagcctacgcccagtatgacaagttctctgtctctgatccccgcagtcgctac
aaggtccacgttggaggctacagtgggacagcgggtgattctatgacctaccaccatggt
cgcccgttctcaacctacgaccatgacaatgacatcgccgtcacaaactgtgccctgtcc
tacaagggtgccttctggtataagaattgccatcgtgtcaaccttatgggacgatatgga
gatgacagtcatagcaagggagtcaactggttccattggaaaggccacgagcactccatt
gagtttgctgagatgaagatcaggccatccaacttcaggaactttgagggaagaaggaag
cgatcgtaa
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