Salvelinus fontinalis (brook trout): 129853969 Help Entry 129853969         CDS       T11136                                  Name (RefSeq) cadherin-23-like isoform X1   KO K06813   cadherin 23 Organism sfon  Salvelinus fontinalis (brook trout) Brite KEGG Orthology (KO) [BR:sfon00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:sfon03037]     129853969    04515 Cell adhesion molecules [BR:sfon04515]     129853969 Cilium and associated proteins [BR:sfon03037]  Primary cilia and associated proteins   USH complex and associated proteins    129853969 Cell adhesion molecules [BR:sfon04515]  Cadherins   Major cadherins    129853969 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Fibulin_C PCDH15_12th Sde0182_C Motif Other DBs NCBI-GeneID:  129853969 NCBI-ProteinID:  XP_055776511 LinkDB All DBs Position 1:complement(37427294..37993106) Genome browser AA seq 3368 aa AA seqDB search MLWSVGFGGRMTVAKILLSFFILNSFCEASNQPPRFQNYFFHSYLLIYENTPVGTSVTQL QAEDPDQEPLIFGVVGEEAMRYFAVERDTGVVWLRQPLDRETKSEMQVEFFVSDSQGVVK DTVNIQIGDVNDNSPTFHGQPYTVHIAENTPVGTSVYQVNATDPDQGTGGSVLFSFQPPS SFFSIDGARGTVTVTRALDYETTSAYQLTVNATDQDKKRPLSSLSNLAITITDVQDMDPI FTNLPYSTNIGEDVPPGYEVRKIRAIDQDLGRPRGIGYTIISGNTNSIFALAYISGSLTV NGQLDRENPLYSSGFTLTVKGTELNDDRTPTDASVMTTFTILLIDKNDNAPKFNSSEYRV RITELAQVGFALPLFIQAEDKDEGVNSMFQVFLSGNNSDHFTISPTAVQGRADIRMRVDV PLDYENIQRYSFSLYANESISEHVGFARIYIDLINENDNRPIFLKPLYNISLPENTPRGT SLLRIQATDGDFGTFGTVRYYFSDEPDQFSLDTETGWVHLWGNLDYELMRRFTLTVLARD GGGEETTGRLWINVLDVNDNTPLFQKEAYMGSLRENEQAAQQVARIRATDEDSPPNNILT YTITSVSAFRGYFRITMVEGYAVVSVNSPLDYEMVPEGMIYLTVMAKDGGNPALNSSVSV TVELFDENDNPPMFSKLSYLVTIPENIIAGATVVFVNATDLDASREFGQASLIYSLQGFS QFRLNTRSGEITTTALLDRELKSEYILIVRAVDGGVGPLQKTGIATVNITILDINDNAPM WRDEPYHANVVEMSPINTDVVSVLAIDPDVGENGTVVYSISPENPFYTINSSTGKIRTSG AVLDRERSNPKDTQLMRTIIVSAVDLGRPPLRSSVSTTVYVNLLDLNDNDPIFLNLPFVA EVPEGLPSGSSVFKIQVEDPDQEENGMVTMGLRVGMPRVDFYLNTTTGVLYSTATLDREQ ISLYHLRIVAYDQGQNPRTSTSTLTITVLDVNDETPTFFPKVYNVSLQESVPRDHVVARL ICSDNDAGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVGLDRETQATYSLVIEAIDNGP AGSRRTGTATVFVEVLDVNDNRPIFLQNSYETSILENVPIGTSILQVQATDSDQGENGRV LYMILSGNSKGLFRINELSGLVMRGQRALDRESSSSHVLEVEAYNSDQGRMRSSVRVIVY VEDANDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDPDTGDGGAVAYALDSGSDRKFD VDVSTGLVTTVDYLDYETKTSYLMNVSATDQAPPFHRGFCMVYVTLLNELDEAVAFSSAG YEVSLLENIATGTEVVQVKAQSADNLNQLSYRFDPDTSPAALALFKIDSITGRITVTGLL DREKGDLYTLTVVADDGGPKKDSTVVSINIQDENDNSPEFDITSDSLVEIPENTPIGKRV AVVLGRDKDAGKNGLVQFRLVAGNMQDVFEIRTVNHTYGEIYVNSPLDRESVDRYLLKVR AMDSGVPPRYRDLPLIINILDVNDNTPVIESQGGYNVSVSENVGGGTSVLRVVATDRDIG PNAMLFYYITSGNKDLTFRMDRMTGEMVTRPSPPDRERQQEYRLIMMVEDDGTPSLSSST TIYVRIVDENDNAPEFPEEEYVTVLSEGPNTVGAIIASVTAIDPDEGLNGTLRYAIVHGN LAITFHINHTTGRIVAVKELDFEISNGHYTLIVTATDQCPIHALRLTSSTTVLVNVLDVN DVTPTFTKPYEGPFEITEGQPGPRVWTLKAIDQDSGLNGKVEYSITAGDPQNEFVVSPVE GELRVRRDVELDRETTPFYNITVMAKDLGNPPRSSMVVVGVHVLDINDNDPMLLNLPHNT SVREGASIHTSVTTVQARDMDSGRNALLTYNITAGNHDGAFYINDTTGMVQVNRPLDRER VGEYRLTITVKDNPENPRIARRDSDLLVITVLDDNDNRPIFTQTSYRAEISENSPSGSAV SVLNGPVLAEDKDIGPNAVVRYRLLGTRLDLFTVDSDTGIVRVRQKALLDREAFVEPRVE LLLVGEDVGGLNSSVPLTVTIMDQNDNPPVFNPPSLTVHLPENSPTGVVVTQLSASDADS GSNAWLLYRLESGAQDRFVVDSLSGAVLVGNATLDREERGSYRLVVVATDRGTPSLSGTA TLSVILDDVNDSRPRFLEPVTTININESTPPGVVVATLAAKDPDLRPRLEYYIISVEAKD DGNNPVVGLQESFGIDFHTGAVFVRNPLNRELVATFEILVSVHDNASDVIDMSVSVPNAR LIVNVLDVNDNAPRFRPFGVANFSEKILEGAQPGTTLLSVSAVDPDKGPNGQVIYQLLHL PRGDYLRLEDPSTGKIIANRTVDFEQVQWLNFTVRAQDHGSPPRVAELPVYLRIVDVNDN NPIFKQPSYQKPVFEDVYLGTVIVRVSATDADSGLFSVIEYSLVDGEGKFGITPSTGDIY ILSPLDRETKDHFTLTAIARDNPGGSPNNRRENSVQVLVTVLDVNDFRPRFSERIFETSV FENEPSGTSVITLTATDLDEGQNGLLSYSMQGPGADAFSLDADTGLVRSLRLLQSFEHFN LTVVATDQGRPPLWGTATLHIIIIDVNDNRPMFVRPTNGTIMHIMEEQPPGLLVYEVFAT DGDEGVNGEVRYAFLQTGAGNRDWDNFHIDAITGVITTAIKLDREKQALHSLIVVAYDLG QPVPYETTQPLQVALLDIDDNEPVFFKPPRGSLPYQTLSVLEHSTPGTVVGNVTGAVDAD EGSNAVVYFFIAGGDTEGNFGLSPGGVLKVKKDLDRENISVYSIIVKASSHRNWAPARGQ RSAWGRALDPSRDPTLEEVRIYLEDINDQPPRFTKLEYTTGVAADAKVGSDLIRVQAIDN DVGNNSLVLYHVLSIRYIKLQSNDTEDIGNGFIIGETDGIIRTFDLFTAYDPGYFVVEVL ARDLAGHSDIAMVGIYILRDDQRVKIVINEIPERVRQFQEEFINLLSNITGAIVNTDDVQ FHVDKKGRVNFAQTDVLIHVVNKHTNRILDVEKVIQMIDENKEQLKKLFRNYNILDVQPA VSGRAPDDLTTLQMAIIILAVLLFLAAMSFIFMNWYYRTVHKRKLKAIVAGSTGKQNLMD ILDLPNTNKYSFEGANPVWLDPFCRNLELAAQAEHEDDLPENLSEVTDLWNSPAPTHGTF GRKPQAKPEDDRYLRAAIQEYDNIAKLGQIMREGPVKGTLLNVVLDDYLRLKKLFAARLV TKSTSQGDQSSVTELIQSDLDDDEDERVGMGDSWGTLRFKHKLPVEMRGPDGVHVVHGSM GTLLTSDLNSLPEDNQLALAHSMEALNATDSGLYAERNARTESAKSTPLHHNKNDDTLSG SPLEITEL NT seq 10107 nt NT seq  +upstreamnt  +downstreamnt atgttgtggagtgtgggtttcggtggcaggatgacggtggccaagattctcctatccttc ttcatcctaaactccttttgtgaagcctccaaccagccaccacgcttccagaactacttt ttccactcctatcttctcatctacgagaacacaccagtcggcacatcagtgacccagctg caggcggaggacccagaccaggagcccctcattttcggggtagtgggagaggaggccatg aggtactttgcagtggagagagacactggagtagtgtggctacgacagcccctggaccgc gagaccaagtcggagatgcaggtggagttctttgtgagtgacagccaaggggtggtcaaa gacacagtgaatattcagataggagatgtgaatgacaactcccctactttccatggccag ccgtacacagtacacattgcagagaacactccagtgggcacctcagtgtaccaggtgaat gccacagacccagaccaaggcacggggggcagtgtgctcttctctttccagcccccctct tcctttttctccatcgatggagcccgtggtacagtcactgtcaccagggctctggactat gagaccacatcggcctaccagctcactgtcaatgccacggaccaggataagaagcgccct ctgtccagtctatctaatttagccatcaccatcactgatgttcaggacatggaccccatc tttaccaacctaccctacagcaccaacataggggaggatgtcccaccgggctatgaggtg cgcaagataagagccattgaccaggatctggggagaccgagaggcatcggctacaccatc atctcaggcaacaccaacagcatctttgctctggcctacatcagtggctctttgacggtg aatggacagctggacagagagaaccccctctactcatccggattcactctaaccgtcaag ggcacagagttgaatgatgaccgtaccccgacggatgcctcggtgatgaccacattcacc atcctgctgattgacaagaacgacaacgcgcccaagttcaacagctccgagtaccgagtg cgtatcactgagctggcccaggtgggtttcgccctacccctcttcatccaggctgaggac aaggatgagggagtgaacagtatgtttcaggtgttcctatcggggaataactcggatcac ttcaccatctcacccacagcggtgcagggccgtgctgacatcaggatgagggtggacgtg cctctggactacgagaacatccaaagatacagcttctctctatatgccaatgagtccatt tcagaacatgtgggttttgcccgtatctacattgacctgatcaatgagaatgacaaccgg cccatcttccttaaacccctgtataacatcagtctgcctgagaatacacccagaggaacc tctctgctacgcatccaggctacagacggtgactttggcacgtttgggacagtgcggtat tacttcagtgatgagcctgaccagttttcattggacactgagacaggctgggtgcatctg tggggcaatctggactatgagctgatgcgtcgattcactctgaccgtgctggcccgggac gggggtggggaggagaccacgggcaggctgtggatcaatgttctggatgtcaatgacaac acaccccttttccagaaggaggcctacatgggctcactgagagagaacgaacaggccgca caacaggtggcccgaatcagggcgacagatgaggactctccccctaacaacatcctgacc tacaccatcacctcagtgtctgcgttccgtggttacttcagaatcaccatggtggagggc tacgcagtggtcagtgtgaacagccctctggactacgagatggtccctgaaggaatgatc tacctgactgtgatggctaaagacggcgggaacccagcccttaacagcagtgtctctgtc accgtcgagctgtttgatgagaatgacaacccgccaatgttcagcaagctatcctacctc gtcacgatccctgagaacatcattgcaggggcgacggttgtgtttgtgaatgccactgat ctggacgcctcccgggagtttggacaggcctcactcatctactccctacagggcttctcc cagttccgcctcaacacgcgctcaggagagatcaccactacagccttactggacagagaa ctgaagtcagagtacatcctgattgtcagagctgtggatggaggggtgggaccactgcaa aagactggcattgccacggtgaacatcaccatcctggacatcaatgacaatgcccccatg tggcgagacgagccctaccacgccaatgtggtggaaatgagccccatcaacactgacgtc gtctctgtgctagcgatagacccagatgttggggaaaatgggacagtggtgtacagcatc agtccagagaaccccttctacaccatcaacagcagcacgggcaagatcaggaccagcggg gccgtgctggacagagagaggtccaacccaaaagacacccagctcatgaggaccatcatc gtgtctgctgtcgatcttggcagacctccactgcgttcctcagtcagcaccacggtgtac gtcaacttgctggaccttaatgacaatgaccccatcttccttaacctgccctttgtggcc gaggtgccagagggcctgcctagtggatcctctgtgttcaagatccaggtggaggaccct gatcaggaggagaatggtatggttaccatggggctacgggtgggcatgccacgagttgat ttctatctcaacaccaccacgggcgtgctgtactcaacggcaactctggaccgcgagcag attagcctgtaccacctgaggatcgtggcgtacgaccaagggcagaacccacgcacctcc accagcacccttaccatcacagtcctagatgtcaacgacgagacccccaccttcttcccc aaggtgtacaacgtgtccctgcaggagagcgtccccagggaccatgtggtggctcgcctc atctgctccgacaatgacgccggccttaacgccgagctcagctacttcatcacaggtggt aaccaggatggtaaattcagtgttggcttcagagatggtgtggttcggactgtggttggc ttggacagagagacacaggctacatactcactggtcatagaggctatcgacaatggtcca gcaggcagcaggaggacaggcacagccacagtgtttgtagaagtactggacgtgaacgac aacagacccatcttcctccagaacagctacgagaccagcatactggagaatgtccccata ggaaccagcatcctgcaggtgcaggccacagattcagaccagggggagaacggcagggtt ctgtacatgatcctctctggcaacagtaagggtctgttcagaattaatgagctgtcgggg cttgtgatgcggggccagagggctctggacagagagagcagcagctcccacgtgctggag gtagaggcctacaacagtgaccagggcaggatgaggagctccgtacgggtgatagtgtat gtggaggatgccaatgacgaggcaccagtgtttacccagcagcagtacaaccgcctgggt ctgagggagaccgctggcattggcacctctgtcatcgtagtacgagctacagaccccgac actggtgacggtggggcggtggcctacgccctggactcaggctccgaccgtaagtttgat gtggatgtgagcacgggcctggtgaccactgtagactacctagactacgagaccaagacc agctacctgatgaacgtgtcggctaccgaccaggcgccgccgttccaccgtggcttctgc atggtctacgtgaccttacttaatgagctggacgaggcggtggcgttctcctctgcgggc tacgaggtgtcactcctggagaacatcgccacgggaacggaggtggtgcaggtaaaggca cagtcggcggacaacctcaaccagctgtcgtatcgctttgacccggacacatcgccagcc gccctcgccctcttcaagatcgacagtatcacgggccgtatcacagtcacagggctgctg gacagggagaagggggacctctacaccctgactgtagtggctgacgatgggggacccaaa aaagactccactgtggtgtcaatcaacatacaggatgagaatgacaacagtccagagttt gatatcacatctgattcattggtggagattccagagaacacaccaatcgggaagagagtg gctgtggtgcttgggcgcgacaaagatgccgggaaaaatggactggtgcaattcaggctg gtggcagggaacatgcaggatgtgtttgagatccggacagtgaaccacacctatggagag atctacgtcaactcccctctggaccgagagtctgttgaccgctacctgctcaaggtgcgt gccatggacagtggcgtgcctccccgctacagagacctccctctaatcatcaacatcctg gacgtcaatgataacacacccgtcatcgagagccaggggggctacaatgtcagcgtcagc gagaatgtgggaggcggtacgtccgtcctgcgcgtggtggccacagaccgggacatcggg cccaacgccatgctcttctactacatcacctcgggtaacaaggacctcaccttccggatg gaccgcatgaccggcgagatggtgacccgaccatccccacctgaccgcgagcgccagcag gagtaccggctgatcatgatggtggaggacgacggcacgccatcactatcgtcatcgact accatctacgtgcgtatagtggatgagaacgacaacgcaccagagtttccagaggaagag tatgtgacggtgctgagcgagggccccaacaccgtgggtgccattattgccagcgtaacc gccatcgacccagacgagggcctcaatggcaccctgcgatatgccatcgtccacggaaac ctggccatcaccttccacatcaatcacactaccggaaggattgttgcagtgaaggagctg gactttgagatcagcaatggacactacacacttatcgtcacagcaacggaccagtgtccc atccatgccctccgcctgacttccagcaccacggtgttggtgaatgtcctggatgtgaac gatgtgacccccaccttcaccaagccctatgaggggccctttgagataacagagggccag ccggggccccgggtctggaccctcaaggccatcgaccaggactctggactcaacggcaaa gtggagtacagcatcactgccggagacccccagaatgagtttgtggtttctccagtggag ggagagctgcgtgtgaggagagatgtggagctggacagagagaccacacccttctacaac atcactgtcatggccaaagacctgggtaacccaccacgcagcagcatggtggtggtgggt gtccatgtgctggacatcaatgacaacgaccccatgctgttgaacctgccccacaacacc agtgtgagagagggggcgtccatccacacctcggtgacaacggtccaagcacgggatatg gacagtggacgcaacgccctgctcacctacaacatcactgccggaaaccacgatggagct ttctacatcaatgacactacagggatggtgcaggtgaacaggcctctggacagagaaagg gtgggggagtacagactgaccatcaccgttaaagacaaccctgagaatccccgcatcgct cgccgggactcagacttgctggtgatcacagttctggatgataatgacaacaggcccata ttcacacagaccagctaccgggctgagatctctgagaactccccctcaggcagtgctgtg tcagtgttgaatggaccagtgttggctgaggacaaagacattgggcccaacgctgtggtc aggtaccgtctgctgggaacaagactggacctcttcactgtggactctgatacaggtata gtgcgtgtgcgacagaaggctctgttggaccgcgaggcgtttgtggagccgcgggtggag ctgctcctggtgggggaggatgtgggagggctcaacagcagcgtgcccctcactgtgaca atcatggaccagaacgacaaccctcctgtctttaacccccccagcctcactgtgcacctc cctgagaacagccccactggtgtggtggtgacccagctgtctgccagtgacgctgattca ggctctaatgcctggctgctttaccggctggagagcggtgcccaggaccgcttcgtagtt gactccctctctggtgccgtcctggtgggcaacgccaccctcgaccgcgaggagcgtggc tcctaccgcctggttgtcgtggctactgaccgtggcacaccctcattgtcgggcacggcc accctgtcggtcatcctggatgacgtcaacgactcgcgaccacgtttcctggaacccgtg acaactattaacataaacgagtctacaccgccgggcgtggtggtggcaacgctcgctgcg aaggaccctgacctacgaccccggctggaatattacatcatctctgtggaggcgaaggat gatggaaataaccctgttgttgggctgcaagagtcattcggcatcgatttccacacgggt gctgtgtttgtgcgtaacccactcaacagagagctggtggccacctttgagatccttgtg tcggtgcatgacaacgccagtgatgtcatcgacatgtcagtcagcgtacctaatgcgaga ctgatagtgaacgtgctggatgtgaatgacaacgccccgcggttcagaccctttggagtg gccaacttctcagagaagattctggaaggcgctcagccaggcaccactctgctgtccgtg tcagctgtggacccagacaaaggccctaacggacaggtcatctaccagctgctacacctg cccagaggggactacctcagactggaggacccctcaactggcaagatcatagccaaccgg acggtggactttgagcaggtgcagtggctgaacttcacagtgagagcccaggaccacggc agtccacctagagtggctgagcttcctgtctacctgcgtatagtcgatgtcaatgataac aaccctatctttaaacaaccctcttaccagaagccagtgtttgaggatgtttacttgggc acggtcatagtgagagtcagtgccacagacgcagactctggcctcttctctgtcatcgag tacagcctagtagatggagagggcaagtttggcatcactccatccaccggtgacatctac attctgtctccactggacagagagactaaagaccacttcaccctgacagccatcgctagg gacaaccctggcggcagccccaacaaccgacgagagaactctgttcaggtcttggtgacc gttctggatgtgaatgacttccgtccgcgtttctcagagcggatctttgagaccagtgtg tttgagaacgagcccagtgggacgtctgtgatcacgctgactgccactgacttggacgag gggcagaacggcctgctctcttacagcatgcagggcccgggggcagatgccttctctctg gacgctgacacaggtctggtgcgttctctccgtctgctgcagtcctttgagcactttaac ttgacggtggtggctacagaccagggcagaccacccctctggggcaccgcaaccttacac atcatcatcatagacgtcaacgacaacaggcccatgttcgtcaggcccaccaacggcacc atcatgcacatcatggaggagcagcccccaggcctgctggtgtatgaggtgtttgcgaca gatggggatgaaggggtgaatggagaggtgcgctatgccttcctccagacaggagctggg aacagagactgggataacttccacattgatgctattacaggagtcatcaccaccgccatc aaactggaccgagagaagcaggccctgcacagtctgattgttgtggcctatgacctgggt cagcccgtgccttatgagaccacccagcccttacaggttgcgctgttggacattgatgac aacgagcctgtcttctttaagcccccgcgaggcagcctgccgtaccagactctgtctgtg ttagagcactctactccagggacagtagtgggtaacgtgacaggagctgtggacgcagat gaaggctccaacgctgtagtctacttcttcatagcagggggagatactgaaggtaacttt ggcctgagcccagggggcgtactgaaggtgaagaaggatctggaccgtgagaacatctca gtgtactccatcatcgtcaaggcctccagccacaggaactgggcccctgctaggggtcaa aggtcagcctggggaagagcacttgaccccagccgtgacccaaccctggaggaggtcaga atctacctggaggacatcaacgaccagccaccacgcttcaccaagctagagtacactaca ggtgtggctgctgatgccaaggtaggctcagatctgattcgggtacaggccatagacaac gatgtagggaacaacagcctggtgctgtaccatgtcctgtccatccgctacattaaactc cagtccaatgacactgaggacataggaaacggcttcatcataggagagacagatgggatc atccgtacctttgacctgttcacggcttacgacccgggctacttcgtggtggaggtgttg gcacgggacctggcgggccacagcgacatcgccatggtgggcatctacatcctgcgggac gaccagcgggtgaagatcgtcatcaacgagataccagagcgggtacgacagttccaggag gagtttatcaacctgctgtccaacatcaccggagccatagtcaacacggacgatgtgcag ttccacgtggacaagaagggcagagtgaactttgcccagacagatgtgctcatacacgtg gtcaacaagcacaccaaccgcatcctggacgtggaaaaggtgattcagatgattgatgag aacaaggaacagctgaagaaactgttcaggaattacaacatcctggatgtccagcctgcc gtcagcgggagagcacctgatgatctcactacgctacagatggccatcattatcttagct gtgttgctcttcttggcagccatgtcattcatcttcatgaactggtactatcgcacagta cacaagaggaagctcaaagccattgtagcaggatccacagggaagcaaaatctcatggac atcctggatttgcccaacaccaataaatactcatttgagggggccaaccctgtgtggcta gacccgttctgtcggaacctggagctagctgcccaggcagagcatgaagacgacctgccg gaaaacctcagtgaggtcactgacctgtggaacagccctgctcctactcacggaacattt ggccgcaaacctcaggcaaagcctgaggatgaccgctacctgagagcagccatccaggag tatgacaacatcgccaagctgggccagatcatgagggaggggcccgttaagggcacattg ctcaatgtggttctggacgactacctgaggctcaaaaagctctttgcagccagactggtc accaagtcgaccagccaaggcgaccaatcgtcagtcacagagctgatccagagtgacctg gatgatgacgaggatgagcgagtgggcatgggtgacagctggggaacgctgcgcttcaaa cacaagctccccgtggagatgaggggacccgacggcgtgcacgttgttcacggaagcatg ggcacgctcctgacctctgacctcaacagtctgcctgaggacaaccagctggccctggcg cactccatggaggcccttaacgccaccgacagtgggctgtacgccgagcgcaatgcccgt accgagtcggccaagtccacgccgctgcaccacaacaagaacgatgacacactgtccggg agcccgctggagatcaccgagttatga

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