Salvelinus fontinalis (brook trout): 129854087
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Entry
129854087 CDS
T11136
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04136
Autophagy - other
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129854087 (atg13)
04136 Autophagy - other
129854087 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129854087 (atg13)
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129854087 (atg13)
Membrane trafficking [BR:
sfon04131
]
Autophagy
Autophagosome formation proteins
ULK complex
129854087 (atg13)
Atg1 complex
129854087 (atg13)
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129854087 (atg13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
129854087
NCBI-ProteinID:
XP_055776693
LinkDB
All DBs
Position
4:complement(59485256..59494336)
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AA seq
549 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHEAKKALSGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RLSLLLKSLLAITRVTPAYKLSRMQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNMGHMRPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQCVFTVSKAHLKTPKPAVMDTLKVPMMGLAFSHQLYCS
RLSYQPPVLVGAADFCHPYTLNAANPHQVTTQMGIPGKEGGVPQQVPVQPCHGAQAEHGR
VSSCPPADHVPATPSSSGEDAETSSRSIEVKSVSPCDVLETTFTRKVGAFVNKPGTQVTT
ASLDLPFAAFAPRAYDPEENDPMVQPPESPATSSPLQGSLHSQGFGESGGPAQDDFVMVD
FKPAFSKDDLLPMDLGTFYREFQNPPQLASLTIDVSSQSMAEDLDSLPEKLAVYEKNIDE
FDAFVDTLQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcataaagttt
tttgctttgaagacagtgcaggtgatagtccaagcgcgtcttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaatctggcaatcaaagatatccca
gaagttacacatgaggcaaagaaagctctgtccgggcagcttcctggcatcggacgatcc
atgtgtgttgagatctccctcaaaacctcagagggagactcaatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaggtgtcctacactgtctataac
cgactgtcattactgctcaagtcactgctggccattacaagggtaaccccagcctacaaa
ctctcacgaatgcaaggccatgactatgtcatactgtacaggatatattttggagaggtt
caactcacaggattgggagaagggttccagacagtgcgtgtcggagttgtgggaactccc
attggaaccatcaccttgtcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataattattgaccacttcgttgagcgcccc
tttggcaacatgggacacatgcgtccatgtaactacagagcacccggggaagatgaagga
gcatacaatggggtggaggattctcaagaagtgtgcaccacgtccttctccacttctcca
ccctcacaatgtgtgttcactgtaagtaaggcacatttaaagacccctaaacctgcagtg
atggacactctgaaagtccccatgatgggcctggccttctcacaccaactctactgctct
cgtctctcttatcagcctcctgttcttgttggagctgctgacttctgccacccttacacc
ttaaacgctgccaacccacaccaggtaaccacccagatgggtattccagggaaggagggg
ggcgtaccccagcaggtgcctgtgcagccttgtcatggtgcccaggcagagcatggacga
gtgtcctcatgcccccctgctgatcatgttcccgccacgccctccagcagtggtgaggat
gcagagacctcgtcgaggagcattgaggtgaagagtgtctctccctgtgatgtactggag
accaccttcaccaggaaagtgggtgcctttgtcaacaagccaggcacacaggtaaccaca
gcaagcctggacttaccatttgcagcttttgctcccagagcctatgaccccgaggaaaat
gaccctatggttcagccgccggagtccccagccacgtcctctcccctgcagggcagtttg
cactcccagggctttggtgagagtggaggcccggcacaggacgactttgttatggtggac
tttaagcctgcgttctctaaggatgacctccttcccatggaccttggcacattctacaga
gagttccagaaccccccacagctcgccagcctcactattgatgtcagttctcagtccatg
gcagaagacctggactctcttcctgaaaaactggcagtatacgagaagaacattgatgaa
tttgatgcatttgtggacacattgcagtag
DBGET
integrated database retrieval system
