Salvelinus fontinalis (brook trout): 129854144
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Entry
129854144 CDS
T11136
Name
(RefSeq) cadherin-5-like
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04514
Cell adhesion molecule (CAM) interaction
sfon04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129854144
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129854144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129854144
04090 CD molecules [BR:
sfon04090
]
129854144
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Major cadherins
129854144
CD molecules [BR:
sfon04090
]
Proteins
129854144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
129854144
NCBI-ProteinID:
XP_055776872
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Position
4:complement(61609092..61623105)
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AA seq
764 aa
AA seq
DB search
MMRQSAWRQMTAPELWMGLFALALTLSLTMAEHMDQRPALQTSPVLHRHKREWLWNNLYV
EEERPTYIQYYLGKLKSTKSGDRTHYVIEGEGANTIFKVDEKGDIFVTERLDREVKSKYN
LTAKLLDASNKLLEKEEKFVILVTDINDNDPVFTKSFNASIKERSKRGTKVIEVTATDAD
DPTTANGELVYKLLEGGDFFNIESTTGIITTKYENLDRETQSSYVVVVQAQDLRGIKQGG
TATTSVSIAVSDINDNIATFTKSSYVFSVKEDMKRGQRIDTMVLEDRDEIQNKDPIFTIA
PSSDIFEMERSQIKDGNLMLKQGLDYETKSSYTFFVHVRENHLQSPADNKDNPLIKAQVT
IQVLDVDEQPEFSKSIYNFNVIEEMMVNNIGVVSARDPDQANKAIRYSIEDKDSPIGINP
ITGQLFTVRKLDRELVANHMFQVKAKEEPNGLESFVNVNILVIDINDNKPELSIEEIFVC
ENDMAGTVIGTLSATDKDDNLPAFSFTLGKPNANFSVINNNDNTSNIVLKHGGFSMEDSG
DYVIEIGISDGGRPPMSSITSLPIKVCRCDNKRIHTQCKAAQLKMGVSVHALIVILVCIL
TILVIVILIAMRKRHQKDALVTLGKSEIHEQLVTYDEEGGGEMDTNGYDVSILISAQNDG
SMRQGPSLYAMVKKPPTACKGDMAVMIEVKKDEADHDRDEIPYDTLHIYGYEGPESLAGS
LSSLDSSSTGSNLDYDFLNDWGPRFRTLAELYGVDGSEGSDSPY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgatgagacagtctgcatggaggcagatgacagcaccagagctgtggatgggtctcttt
gccttggctctgaccctcagtctaaccatggctgaacatatggatcagaggccagcactc
caaaccagcccagttctccacaggcacaagagagagtggttgtggaacaacctttatgtg
gaggaggaaaggccaacctacatccaatactatcttggaaagttaaagtcaactaagtct
ggtgacaggacacactatgtcattgaaggagaaggtgccaacacaatcttcaaagtggat
gaaaaaggagacatctttgtcactgaacgattggatcgagaggtgaaaagcaaatacaat
ctaacggcaaagctgcttgatgccagcaacaagttgctggagaaagaggaaaagtttgtg
atcctggttactgacatcaatgacaacgatccagtgtttactaaatcgttcaatgcttct
atcaaagagagatccaaaagaggaactaaagtgatagaagtcactgccactgatgcagat
gatccaacgactgcaaatggagaacttgtttacaaattattagaggggggagatttcttc
aatatagaaagcacaacagggattatcactaccaagtatgagaacctggaccgtgagacc
cagagtagctatgtggttgtggttcaagcccaggatctgagaggaattaaacaagggggc
accgccaccacctctgtcagcatcgcagtcagcgacatcaatgataacatagccacattt
accaaaagttcctatgtatttagtgtgaaagaggacatgaagcggggacagagaatagac
accatggtcctggaagacagagatgagatccagaataaagaccccatcttcaccatagca
ccttcatctgacatttttgaaatggagcgcagtcagatcaaagacggcaacctcatgctg
aaacagggactggattatgaaaccaagagcagctacacgttctttgtgcatgtgagggag
aaccacttgcagtcccctgcggataataaggacaatccattgatcaaggcccaggtgacc
atccaggtgctagatgttgatgagcagccagaattcagcaagagcatctacaactttaat
gtcatagaggaaatgatggtcaataatattggagtcgtttcagccagagatcctgatcaa
gccaacaaggccatacggtattccattgaggacaaggacagtcccattggtatcaacccc
ataactggacaacttttcacagtgaggaagctggatcgggagcttgtagccaatcacatg
ttccaggttaaagctaaggaggaaccaaatggactggaatcttttgtgaacgtcaacata
ctggtcattgatatcaatgacaacaaaccagagctgtccattgaagagatattcgtttgt
gaaaatgatatggctggcacggtgattgggaccctaagtgccacagacaaagatgataat
ttgcccgcattcagcttcacgttggggaagccgaacgccaacttttcagtcatcaataac
aacgacaacacgtctaacatagtgctgaaacatggaggcttcagcatggaggactccggg
gattatgtaatagaaattgggatcagcgatggaggcaggcctcccatgagcagcatcacc
tctctgcctatcaaagtgtgcaggtgtgacaacaagaggatccacacccagtgcaaagca
gcccaactcaaaatgggtgtcagtgtccacgcccttattgttatactggtgtgcatcctg
actattctggtcatagtgatcctgatcgctatgagaaaacgtcaccagaaggatgccctg
gtcactctgggtaagagtgagatccacgagcagctagtgacgtacgacgaggagggcggt
ggggagatggacaccaacggctacgacgtgtccatcctgatctcagctcagaatgacggc
agcatgaggcagggccccagcctttacgccatggtgaagaaaccaccaaccgcgtgcaag
ggagacatggccgtgatgatcgaggtgaagaaagacgaggctgaccatgacagggatgag
atcccctacgataccctgcacatctatggctacgaggggccagagtccctggctggtagc
ctcagttccctggatagttcctccacgggctctaaccttgactatgacttcttaaacgac
tggggccctcgcttcagaaccctggctgagctctacggggtggatgggtctgagggaagt
gactccccgtattga
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