Salvelinus fontinalis (brook trout): 129854244
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Entry
129854244 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
sfon04144
Endocytosis
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129854244
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129854244
09144 Cellular community - eukaryotes
04530 Tight junction
129854244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129854244
04121 Ubiquitin system [BR:
sfon04121
]
129854244
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129854244
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129854244
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129854244
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
HECT type E3
129854244
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
129854244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Microp_apicomplexa_11
Motif
Other DBs
NCBI-GeneID:
129854244
NCBI-ProteinID:
XP_055777028
LinkDB
All DBs
Position
4:complement(66359444..66414366)
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AA seq
1190 aa
AA seq
DB search
MARRLRLHFASRRSNTDPLSESLSSHGEESGLCVSTRSPAESLAHSSVHMKVIPGQLALA
LPPLSPEYGNLQRYSSVFIPKVNTGTVSKKSTLQISLQPHGKLNGELENSTEGGEPGVGE
VGAGSGSDGGSCRSSTASDAGYCSSSSSIFEPELPDQRRAAQERSLPRRKTRVPLRRCSS
LVIFPRSPCNTPPASPVSPVALPALPPVRGFYQTSHQLQLSPSEPLQEDETGTSKASIAT
AMNGLRLSKNSFPSVEFRDARPMVHFNVPLLDKPKDKMEECEKTDRSENLDRHSSVLLHF
AHQRLMSGKASTNRTTVNVECPESPNQAPQSERECGPRHIKLFHSTSACLLPSAKLSERS
QSAGRADNGNGQEMPEQNHCHHALQRSFSLEVPYHNTGISCHVSNQKLANSPYVHIHVSH
GSGARVSSPVIDVNTNHKGDHMQKSPARKTMTRDDFLGQVDVPLHQIPTENPNIERPYTF
KDFLLHPRSHKSRVKGHLRLKMTYLPKNNSEDAAEQTEDMDPSWEFLEGQDMSGPRHNHL
LPAMPPGWEERQDNLGRTYYVNHETRTTQWHRPIVQDSQVEAEQRQNIHMEAQHAFTARR
QISDQEDSNDRQQESTESWEIITEDESTLYNSQRSPPPPHSPLEFHSFCDELSRLQASGA
TSGNRRTSLQLQGPSSHSSHSSRRGSAQTLTVEEHPVHPVLLATSAGLPPGWEEKQDSKS
RPYYVNHNSRITTWTRPLIQEDPRLKIPVHMRRRPSLDPTDLGPMPPGWEERVHSDGRIF
YIDHNTKNTQWDDPRLQNSAITGPAVPYSRDYKQKYEYFRKKLKKPADIPNRFEMKLRRN
TVLEDSYRRILSIKRADFLKARLWVEFEGEKGLDYGGVAREWFFLISKEMFNPYYGLFEY
SATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKHIT
LQDMESVDSEYFNSLKWILENDPIDLDLRFTIDEELFGQTHQHELKPGGSEIVVTDDNKK
EYIHLVMQWRFVNRILKQMTAFKEGFYELIPQDLIKIFDENELELLMCGLGDVDVNDWRE
NTKYKNGYCPNQPVILWFWKTVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLF
TIEQWGTRDKLPRAHTCFNRLDLPPYESFEELREKLHIAIENAQGFDGVD
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcggctccgcttgcactttgcgtcgaggagaagcaatacggatcctctatca
gagagcctgagcagccatggtgaggagagcggtctctgtgtgtcaacccgcagccccgca
gagagcctagcacacagctctgtccacatgaaggtgattccagggcagctagccttggct
ttgcctcccctgtcaccggagtacggtaatttacagcgctactcatccgtatttataccc
aaggtgaacaccggcaccgtcagcaagaagagtactctgcagatctccctgcagccccat
ggcaagctgaatggagagctggagaacagcactgagggcggggagccaggggtcggcgag
gtgggagcgggcagtggctcagatgggggctcctgtagaagcagcacggccagtgacgca
ggctactgcagcagcagcagcagcatctttgagccagagctcccagatcagcgtagggca
gcccaggagaggagtctgccccgtaggaaaaccagggtccccctgagacgctgctcctcc
ctggttatatttccacggagcccctgtaatacaccaccagcctccccggtcagccctgtg
gctctacccgccctgcctccagtcagaggcttctaccagacttctcaccagctccagttg
tcccccagtgagcccctgcaggaggacgagacgggtacctcgaaagcgtccatcgccacg
gcaatgaacggcctgcgactctctaagaatagctttccgtcagtggagttcagagacgcc
aggcccatggtgcattttaacgttccgcttctggataaacctaaagacaaaatggaggag
tgtgagaagactgaccgctctgaaaatttagaccgacactccagtgtgctactgcacttt
gcacatcagcgactaatgtctgggaaggcatctacaaacagaacaacagtcaatgttgaa
tgtcctgaatctccaaaccaggcccctcagtcggagcgtgaatgtggccctcgccacatt
aagctgtttcacagcacctcggcttgcttgctcccctcagctaaactttcagagaggagc
caaagtgccggtcgcgcagacaatggaaatggacaggaaatgcctgagcaaaaccattgt
catcacgccttacaaaggagcttttctctggaagtcccctaccataatactggtatttca
tgtcacgtttccaaccaaaaactagctaactctccatatgtgcacatccatgtgtcccac
ggctctggggcaagggtctctagccctgtcattgacgtaaacactaaccacaaaggggat
cacatgcaaaagagccctgcaagaaagaccatgacacgtgatgactttctggggcaggtg
gatgtaccattacaccagataccgacagaaaatcctaacattgaaaggccatacacattc
aaggattttctacttcacccgagaagtcacaaatccagggtcaaaggtcatctccgtctg
aagatgacctacctacccaaaaacaactcagaggatgctgcagaacagactgaagacatg
gatcctagctgggagtttttagagggccaggacatgtccggtcccaggcacaaccacctg
ttgcctgcaatgccccctggctgggaggagaggcaggacaacctgggcaggacctactat
gtcaaccacgaaaccaggaccacacagtggcacaggcccatagtacaagacagccaggta
gaggcagagcagaggcaaaacatccacatggaggcacagcacgccttcaccgcccgcagg
cagatctccgaccaagaggactccaacgacagacaacaagagtcaacggagagttgggaa
atcataacagaggatgagtccaccttgtacaacagccagcgctccccccctccaccccac
tcccccctggagtttcactccttctgtgatgagctcagtcgcctccaggcctcgggtgcc
acatccggcaaccgacgtacctccctccagctgcagggcccttccagtcattcaagtcac
tccagtcgcagaggcagtgcccagacactgacagttgaggagcaccctgttcatcctgtg
ttgttagcaacctcagcggggctgcctccaggctgggaggagaagcaggatagtaagagc
agaccctactacgttaatcacaacagcaggataaccacttggacacggccactcatccag
gaagaccccaggttgaagattcctgtgcacatgaggaggagaccttcgctagacccaact
gacctcgggccaatgccgcctggctgggaggagagggtccacagtgatgggaggatattc
tacatagatcacaacacgaagaacacacaatgggatgaccccagattgcagaattcagcc
ataactggaccagctgtgccttactccagagactataaacagaagtatgaatacttccgg
aagaagctgaagaaaccggctgacatccccaaccgctttgagatgaagctcaggcggaac
accgtgctagaggactcctacagacgaatcctgtcaatcaagagggccgacttcctgaag
gcgcggctgtgggtggagtttgagggagagaagggcttggattatgggggcgtggccagg
gagtggttcttcctaatctccaaggagatgttcaacccctattatgggctgtttgagtat
tctgccacggacaactacactctgcagatcaaccccaactcaggcctctgcaatgaggac
cacctgtcctactttaagttcattggccgtgtggcaggcatggctgtctaccatggaaag
ctgctggacgccttcttcatcaggcctttctacaagatgatgttgcagaagcacattact
ctacaggacatggagtctgtggacagtgagtacttcaactccctgaagtggatattggag
aatgacccgatagacctggatctgagattcaccatagacgaagagctctttggacagacc
caccagcatgagctgaagccaggaggatctgaaatagttgtcaccgatgacaacaagaag
gaatatatccatcttgtcatgcagtggaggttcgtgaacaggatactgaagcagatgacc
gcatttaaggagggattctatgagttgataccccaggatctcatcaagatctttgacgag
aatgagctggagctcctgatgtgtggcctgggagacgtggatgtgaacgactggagggag
aacaccaagtacaagaatggctactgtcccaaccagcctgtcatcctgtggttctggaag
actgttctgctgatggatgcagagaagcgtatccgcctgttgcagtttgtgactggcacc
tcccgggtcccaatgaatggctttgcagagctctacgggtctaacggaccacagctgttt
accattgagcagtggggaacacgagacaaactacctagagcccacacgtgcttcaaccgg
ctggacctgcctccctatgagtcgtttgaggagctgagggagaagctacacatcgccata
gagaatgcacaaggctttgatggagtggattag
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integrated database retrieval system
