Salvelinus fontinalis (brook trout): 129854331
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Entry
129854331 CDS
T11136
Name
(RefSeq) LOW QUALITY PROTEIN: B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04371
Apelin signaling pathway
sfon04514
Cell adhesion molecules
sfon04520
Adherens junction
sfon05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129854331
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129854331
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129854331
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129854331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129854331
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129854331
04090 CD molecules [BR:
sfon04090
]
129854331
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
129854331
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Major cadherins
129854331
CD molecules [BR:
sfon04090
]
Proteins
129854331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Cadherin_4
BACON_2
Motif
Other DBs
NCBI-GeneID:
129854331
NCBI-ProteinID:
XP_055777238
LinkDB
All DBs
Position
4:complement(72344419..72361139)
Genome browser
AA seq
1044 aa
AA seq
DB search
MGAFWFVELGVLILFLQAFKPGLSEESKCLPGFNSEMYIFKVERNHLQSGRSLGKVVFDD
CTSRTSFLFHSEDSRFKVDGDGTLKLKRGLTLHNGHKEFYVSTQSKGKKIMVPVRVLHEA
RHGHNHNHHEMTTQPKPGESLSLPVLNFPKSSGGLKRRKRDWIIPPINFPENDRGPFPKN
MVQIRSNNDKEVKIQYSITGAGADLPPVGLFTVDKNSGTLYVTQPLDREKKDKYILLVHA
VAVGAGTAEDPMEIIVKVIDMNDNKPEFTQDPFTGTVPGASKPGDEVMQITATDADEEGS
DNSDVRYTIISQEPPLPSPNMFVINPVTGGIRVNAPGLNREKFTKYTLEIQAADMEGNGL
TSVGKAIITVTDSNDNAPQFVTPSYTVSIPENKVDALVVKMPVTDGDEPHSSAWATTYKI
VDGDPQGLFHVCTGPSKLEGIIMTVKPGESLSLPVLNFPKSSGGLKRRKRDWVIPPINFP
ENDRGPFPKNMVQIRSNNDKEVKIQYSITGAGADLPPVGLFTVDKNSGTLYVTQPLDREK
KDKYILLVHAVAVGAGTAEDPMEIIVKVIDMNDNKPEFTQDPFTGTVPGASKPGDEVMRV
TAPDADEEGSANSDVRYTIISQEPPLPSTNMFVINPVTGGIRVNAAGLDREKIPKYTLAI
QAADMEGNGLTSVGKAIITVTDSNDNAPSIVDGDPQGLFSVSTGPSNLEGIITTAKPLDF
EKNNKYTLLVIVQNEVPFAISLPTSTATVVVNVEDVNEAPVFTPVEKIIRKPEDLPVDSD
LVLYPATDPDTARSQKVSYKIRNDPAGWLSINKDTGLIKVKSLMDRESTFVQNNKYSVIV
LGIDNDEIPATGTGTLIIELEDVNDNAPTIDESVIKVCNKESSPQLLSVTDKDGAGFAAP
YTVQLQGLSQSNWTARMNDTKTGIILTLKTMLDSGDYTVVLRVSDNQGLYHDSTVQVSVC
DCKGADVQCTDKAVAGFGLSILGILGAVLLLLLLSLLLLMFLRKRGGEKEPQEDDVIYYY
DEEGGGEDDQLKGRTHQTSSEQAH
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgggggcattttggttcgtggagctgggcgtattaatattatttctccaggctttcaaa
ccagggttgtcggaggagtcaaaatgtcttccaggtttcaattcagaaatgtacattttc
aaagtggaaagaaatcacttacaaagtggccggagtcttgggaaagtggtttttgatgac
tgcaccagccgtaccagctttctctttcactccgaggattcacgcttcaaagtagatggc
gacgggacgctgaaactgaagagggggctgactctgcataatggacataaggagttctat
gtctctacccagtccaagggcaagaagatcatggttccagtcagagtgctgcatgaggcc
agacatggccacaaccacaatcaccatgagatgaccacccagcccaagccaggagaaagt
ctgtctctacctgttctgaacttccccaagtcttcaggaggtctgaaaagaaggaagagg
gactggatcattcctcccatcaacttcccagagaatgaccgaggcccgttccccaagaat
atggtgcagatcaggtccaacaatgataaagaggtgaagatccagtacagcatcactggc
gctggggcagacctacctcctgtgggactcttcactgtggacaaaaactctggaactctc
tatgtgacccagcctttggacagggagaaaaaagacaaatacattctcctagtccatgct
gttgcagtgggtgcaggtacagctgaggatcccatggagatcattgtgaaagtcattgat
atgaatgacaacaaacctgaatttacccaagatccatttacgggaacagtccctggggca
tcaaaaccaggtgacgaggtcatgcagataacggccactgatgctgatgaggagggctct
gacaattctgatgtcagatacaccattatcagtcaggagcctccactaccaagccccaac
atgtttgtcatcaaccctgtgactggagggattcgggttaacgcacctgggttgaacaga
gagaaatttaccaaatatactttggaaatccaagctgccgatatggagggaaatggcctt
accagcgttggcaaagccatcattacagtaacggacagcaatgacaacgcgccacagttt
gtgacgccttcgtacaccgtgtcaatcccagagaataaagtggatgccttggtggtgaaa
atgcccgtgactgatggagatgagcctcactcctctgcctgggccaccacctacaagata
gttgacggggaccctcaaggccttttccatgtgtgcacaggccccagcaagctggagggc
atcattatgacagtaaaaccaggagaaagtctgtctctacctgttctgaacttccccaag
tcttcaggaggtctgaaaagaaggaagagggactgggtcattcctcccatcaacttccca
gagaatgaccgaggcccgttccccaagaatatggtgcagatcaggtccaacaatgataaa
gaggtgaagatccagtacagcatcactggcgctggggcagacctacctcctgtgggactc
ttcactgtggacaaaaactctggaactctctatgtgacccagcctttggacagggagaaa
aaagacaaatacattctcctagtccatgctgttgcagtgggtgcaggtacagctgaggat
cccatggagatcattgtgaaagtcattgatatgaatgacaacaaacctgaatttacccaa
gatccatttacgggaacagtccctggggcatcaaaaccaggtgacgaggtcatgcgggta
acggcccctgatgctgatgaggagggctctgccaattctgatgtcagatacaccattatc
agtcaggagcctccactaccaagcaccaacatgtttgtcatcaaccctgtgaccggaggg
attcgggttaacgcagctgggttggacagagagaaaattcccaaatatactttggcaatc
caagctgccgatatggagggaaatggccttaccagcgttggcaaagccatcattacagta
acggacagcaatgacaacgcgccttcgatagttgacggggaccctcaaggccttttcagt
gtgagcacaggccctagcaacctggagggcatcattacaacagccaagccacttgacttt
gagaagaacaacaagtacactctgctggtcattgtgcagaatgaagtcccatttgcaatc
agcctgcccacctccactgctactgttgtagtgaatgtggaggatgtgaatgaagctcca
gtcttcaccccagtggagaagattatcaggaaacctgaggacctccctgttgacagtgac
ctggttctgtacccagccacagacccagacactgcaaggagtcagaaagtctcatacaag
atacgcaatgatcctgctggatggctaagtattaacaaagacactgggctgatcaaagtc
aagagcctaatggacagagaatccacttttgtccaaaacaacaaatactctgttattgtt
ctgggcatcgacaacgatgaaatcccggcaactggcactggcacccttatcatagagctg
gaggatgtgaatgataatgctccaactatcgacgagagtgtgatcaaggtctgcaacaag
gagtcctccccacagctgctgtcagtcactgataaagacggcgcgggctttgctgctcca
tacaccgtacagcttcaggggttgtcccaatctaactggactgccagaatgaacgacaca
aagactggcattatcctgactctgaagactatgttggacagtggagattacacggttgtc
ctgagagtgtctgacaaccagggcctataccatgacagcaccgtccaggtctccgtgtgt
gactgcaaaggagcagatgtccagtgcaccgataaagctgtagcaggcttcggcctcagc
attctgggaattctaggagcagtattactactcctattgttgtctcttctgctgctcatg
ttcctgaggaagagaggtggtgagaaggagcctcaggaggacgatgtcatctactactat
gacgaggagggaggtggggaggatgaccagttgaaagggagaactcaccagactagctca
gaacaagcccattag
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