Salvelinus fontinalis (brook trout): 129854332
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Entry
129854332 CDS
T11136
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04371
Apelin signaling pathway
sfon04514
Cell adhesion molecules
sfon04520
Adherens junction
sfon05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129854332
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129854332
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129854332
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129854332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129854332
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129854332
04090 CD molecules [BR:
sfon04090
]
129854332
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
129854332
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Major cadherins
129854332
CD molecules [BR:
sfon04090
]
Proteins
129854332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
BACON_2
Motif
Other DBs
NCBI-GeneID:
129854332
NCBI-ProteinID:
XP_055777240
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All DBs
Position
4:complement(72282904..72301058)
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AA seq
886 aa
AA seq
DB search
MYSKQMGAFWFVELGVLILFLQAFKPGSSESKCLPGFNSEIYIFKVERNHLQSGRRLGKV
VYNDCTSRTSFLFHSEDSRFKVDGDGTLKLKRGLTLHNGHKEFYVSTQSKGKKIMVPVRV
LHEARHGHHHNHHEMTTQPKPGASLSLPVLNFPKSSGGLKRRKRDWVIPPINFPENDRGP
FPKNMVQIRSNNDKEVKIQYSITGAGADLPPVGLFTVDKNSGTLYVTQPLDREKKDKYIL
LAHAVAVGAGVAEDPMEIIVKVIDMNDNKPVFTQNPFTGTVPEASKPGDEVMQVTATDAD
EEGSANSDVRYTIIRQEPSLPSPNMFVINPVTGGIRVNAPGLDREKIPKYTLEIQAADME
GNGLTSFGKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDEPHSSAWAT
TYKIVDGDPQGLFSVSTGPSKLEGIIITAKPLDFEKNNKYTLLVTVQNEVPFAISLPTST
ATVVVNVEDVNEAPVFTPVEKIIRKPEDLPVNSDLVLYTATDPDTARSQKVSYKIRNDPA
GWLSINKDTGLIKVKSLMDRESTFVQNNKYSVIVLGIDNDEIPATGTGTLIIELDDVNDN
APTIDESVIKVCNKESSPQLLSVTDKDSAGFAAPYTVQLQGLSQSNWTARMNDTKTGIIL
TLKTMLDSGDYTVVLRVSDNQGLYHDSTVQASVCDCKGADVQCTDKAVAGFGISSILGIL
GAVLLLLLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHK
GLDNRPDVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDY
EGGGSEAGSLSSLNSSNSGDDQDYDLLQEWGPRFKKLSDMYGGGED
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaaaacaaatgggggcattttggttcgtggagttgggcgtattaatattattt
ctccaggctttcaaaccagggtcgtcggagtcaaaatgtctaccaggtttcaattcagaa
atatacattttcaaagtggaaagaaatcacttacaaagtggccggagactaggaaaagtg
gtttataatgactgcaccagccgtaccagctttctctttcactccgaggattcacgcttc
aaagtagatggcgacgggacgctgaaactgaagagggggttgactctgcataatggacat
aaggagttctatgtctctacccagtccaagggcaagaagatcatggttccagtcagagtg
ctgcatgaggccagacatggccaccaccacaatcaccatgagatgaccactcagcccaag
ccaggagcgagtctgtctctacctgttctgaacttccccaagtcttcaggaggtctgaaa
agaaggaagagggactgggtcattcctcccatcaacttcccagagaatgaccgaggcccg
ttccccaagaatatggtgcagatcaggtccaacaatgataaagaggtgaagatccagtac
agcatcactggcgctggggcagacctacctcctgtgggactcttcactgtggacaaaaac
tctggaactctctatgtgacccagcctttggacagggagaaaaaagacaaatacattctc
ctagcccatgctgttgcagtgggtgcaggtgtagctgaggatcccatggagatcattgtg
aaagtcattgatatgaatgacaacaaacctgtatttacccaaaatccatttacaggaaca
gtccctgaggcttcaaaaccaggtgatgaggtcatgcaggtaacggccactgatgctgat
gaggagggctctgccaattctgatgtcagatacaccattatccgtcaggagccttcacta
ccaagccccaacatgtttgtcatcaaccctgtgactggagggattcgggttaacgcacct
gggttggacagagagaaaattcccaaatatactttggaaatccaagctgccgatatggag
ggaaatggccttaccagctttggcaaagccatcattacagtaacggacagcaatgacaac
gcgccacagtttgtgacgccttcgtacaccgtgtcagtcccagagaataaagtggatgcc
ttggtggtgaaaatgccagtgactgatggagatgagcctcactcctctgcctgggctacc
acctacaagatagttgacggggaccctcaaggccttttcagtgtgagcacaggccctagc
aagctggagggcatcattataacagctaagccacttgactttgagaagaacaacaagtac
actctgctggtcactgtgcagaatgaagtcccatttgcaatcagcctgcccacctccact
gctactgttgtagtgaatgtggaggatgtgaatgaagctccagtcttcaccccagtggag
aagattatcaggaaacctgaggacctccctgttaacagtgacctggttctgtacacagcc
acagacccagacactgcaaggagtcagaaagtctcatacaagatacgcaatgatcctgct
ggatggctaagtattaacaaagacactgggctgatcaaagtcaagagcctcatggacaga
gaatccacttttgtccaaaacaacaaatactctgttattgttctgggcatcgacaacgat
gaaatcccggcaactggcactggcacccttatcatagagctggatgatgtgaatgataat
gctccaaccatcgacgagagtgtgatcaaggtctgcaacaaggagtcctccccacagctg
ctgtcagtcactgataaagacagcgcgggctttgctgctccatacaccgtacagcttcag
gggttgtcccaatctaactggactgccagaatgaacgacacaaagactggcattatcctg
actctgaagactatgttggacagtggagattacacggttgtcctgagagtgtctgacaac
cagggcctataccatgacagcaccgtccaggcctccgtgtgtgactgcaaaggagcggat
gtccagtgcaccgataaagctgtagcaggcttcggcatctctagcattctgggaattcta
ggagcagtgttactactcctattgttgtctcttctgctgctcatgttcctgaggaagaga
ggtggtgagaagaaggagcctctgctgcaggaggacgatgtcagggacaacatctactac
tatgacgaggagggaggtggcgaggatgaccaggatttcgacttgagcgttctgcacaaa
ggtctggataaccgtcctgatgttttccgtaatgacatcgctccaaccatggcccggcca
gagtatcgcccacgacccgccaacccagccgacataggcaacttcattgatgataacctg
aaggcagctgacaacgaccccactgctcctccctacgactccctcctggtgtttgactat
gaaggaggtggctctgaggccggctccctcagttccctcaactcctccaactcaggagac
gaccaggactacgacctccttcaagagtggggcccgcgcttcaagaagctgtctgacatg
tacggaggaggagaggattga
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