Salvelinus fontinalis (brook trout): 129854390
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Entry
129854390 CDS
T11136
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03015
mRNA surveillance pathway
sfon03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129854390
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129854390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129854390
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
129854390
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Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
129854390
NCBI-ProteinID:
XP_055777340
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Position
4:74865423..74869362
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AA seq
467 aa
AA seq
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MAAKAADGGGATDLIDIYDEKFSQNNGEDGDFATTAEASDLYDDVLTGSVSRERKFSEDA
MPLSKDQPTKEESKPAILYTYSGVWNKRLAVYVGNFSWWTSDKDLINVARTLGVKDIVEI
KFAENRANGQSRGYAEVVVATEESLQRLLETLPNCHVNGEKVDCRFATRQNLAVFEAQAN
KRVPQRSNSKESSDTGDKNTSVSPPVLNQNHSTIPHTIHPQHIHNKPPPLSVPYFRLPPP
LFPHLPPHIPPPPMPHLFPPPPLRLPSHPPPSLHLNPAFFPPAQHDNYSQQHNTLYNRHS
SRDSEAPTPQIPEGEFDELMNRNRAIASSAITKAVSGATAGDMPLAIETLLTAIAVIKQS
RVYGDERCRALVTSLKDCLFSIESKSYGSRKRHRSRDREHRSRDRERDRERERDRGRERE
ESYSQEWEAAGMSRRHRERSLSGERDGRDRERVRERDRHREHRERHR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaaagcggccgatggtggtggtgcaactgacctcatagacatctacgacgag
aagttcagtcaaaacaacggggaggatggagattttgcaacaacggcagaggcaagtgat
ctttatgatgacgtgctcactggctctgtgagccgggaaaggaaattctcagaggacgct
atgcctctcagcaaggaccagccgacgaaagaggagagcaaaccagcaatactgtacact
tacagtggagtgtggaacaagagactggctgtatatgtgggcaacttctcctggtggacc
tccgacaaagaccttattaacgtggcgcgcaccttgggtgtgaaggacattgtggagatc
aaatttgctgagaacagagctaatggccagtccaggggatacgctgaggtagtggtggcc
acagaagagtcattgcagaggttgctggagacattgccaaattgtcatgttaatggggaa
aaggtggactgccgctttgccacacgccagaatcttgccgtgtttgaagcccaggctaat
aaacgtgtcccccagcgctctaactcaaaggagtcgtcagatactggggataaaaacacc
tccgtctcccctcctgtgctcaaccagaaccactccactatccctcacactatccacccc
caacacattcacaacaaacctccccctctgtcagtcccatactttaggctgcctcctcct
cttttccctcaccttcccccacacattccccctccccccatgcctcatcttttccctcca
ccacctctacgtctccccagccatcctcctccctccctgcatctcaaccccgccttcttt
cctccagcacaacatgacaactacagtcaacaacacaacacactgtacaaccggcacagc
agcagggacagtgaagcacccacaccccaaattccagagggagagtttgatgagctgatg
aacagaaacagagcaatcgccagcagcgccatcaccaaggctgtgtctggagctactgct
ggagacatgcccctggccattgagacccttttgactgccattgctgtcatcaagcagtca
agagtgtatggggacgagcgctgtcgagcgctggtcacctctctgaaagactgcctcttc
tccatcgagagcaagtcttacggctccaggaaaagacaccgttcccgtgatagagaacac
cgttcccgagatagagagcgggacagggaaagagaacgggacagaggcagggaaagggaa
gagtcctacagccaggaatgggaggctgcaggaatgtcccgccggcaccgagaacgctcc
ctaagtggggagagagatgggagagaccgggagcgtgttcgggaacgagatagacatagg
gagcaccgcgagcggcaccgctag
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