Salvelinus fontinalis (brook trout): 129854436
Help
Entry
129854436 CDS
T11136
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129854436
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfon01007
]
129854436
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129854436
Enzymes [BR:
sfon01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
129854436
Amino acid related enzymes [BR:
sfon01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
129854436
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129854436
Prokaryotic type
129854436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
129854436
NCBI-ProteinID:
XP_055777456
LinkDB
All DBs
Position
4:76501131..76518884
Genome browser
AA seq
824 aa
AA seq
DB search
MKENSNLKMAECMAARLTAQEEQIELLTREFSLLRDGLNGGPEVASILASSPELESLRSE
NEKLKFRLVHLRRGLQEELALEGQGKRGTNKGQEKTGKKQQQQQPKNRNYDNNKAATHET
KPVVDKEKPENKKKKAQGGGGGRESFQLKPWPGYISERMQLYEELKKESDALLARRAADS
QPITVELPDGHRVEGQAWVTTPYQLACGISQGLADNAVISRVNGDLWDLDRPLEKSCSLE
ILHFDNDDAQAVYWHSSAHILGEAMEHFYGGCLCYGPPIENGFYYDMFLDGPQGVSSTEF
EYLEALCKSVVKEKQPFERLEVSKETLLKMFKYNKFKCRILNEKVTTPTTTVYRCGPLID
LCRGPHVRHTGKIKALKIYKNSSTYWEGRSDMETLQRIYGISFPDSKMLKEWERFQEEAR
NRDHRKIGKEQELFFFHDLSPGSCFFLPRGAYLYNTLTDFIREEYCRRGFQEVASPNIYN
SKLWETSGHWQHYSDNMFSFPVEQDVFALKPMNCPGHCLMFSHRPRSWRELPLRLADFGV
LHRNELSGTLTGLTRVRRFQQDDAHIFCTMEQIESEMKGCLDFLRCVYDVFGFSFQLHLS
TRPEKYLGDIAIWNQAEKQLENSLNEFGEPWKLNPGDGAFYGPKIDIKIKDAIGRYHQCA
TIQLDFQLPIRFNLTFVGKDGDDKAKPVIIHRAILGSVERMIAILTENYAGKWPLWLSPR
QVMFVPVNPTCEEYAKRMCKQFVEAGFMADADLDSSCLLNKKIRNAQLAQYNFILVVGEK
EKLTNGVNVRTRDNKVHGELSVSEVLARLTLLKESRCRNAEEEF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaatagtaatttaaagatggcggagtgcatggcagcacgtttgaccgcgcaa
gaggagcagatagagctcctcactcgggaatttagcctcctacgagacgggctaaatggt
ggtccagaggtcgccagcattctcgccagttctccggagctggagagcttacggagcgag
aatgagaagctcaaatttcgtctcgtgcacctccgccggggtctccaggaagagctcgcc
ctggagggacagggcaagaggggcacaaacaaaggccaggagaagacagggaaaaaacaa
caacagcaacaaccaaagaaccgcaattatgataataataaggcagcaactcatgagacc
aaacctgttgttgataaggagaagccagagaacaagaagaagaaggcacagggagggggt
ggtggcagagagtctttccagctgaaaccgtggcctggctacatctcagagcgcatgcag
ctgtatgaggagctgaaaaaggagagcgatgccctgctggccaggagagctgcagacagc
cagcccatcactgtggagctgccagatggacacagggtggagggtcaggcctgggtcact
accccctaccagctggcctgtggcatcagtcagggcttggctgacaatgcagtgatttcc
cgggtgaacggggacctgtgggacctggatagacctctggagaagagctgctcactggag
atcctgcactttgacaatgatgatgcccaggctgtgtactggcactccagtgctcacatc
cttggtgaggccatggagcatttctatggaggctgtctgtgttatggaccacccattgag
aatggcttctactatgacatgttcctcgatggaccccagggtgtgtcgagtacagagttt
gagtacctggaggcgctgtgcaagtctgtggtgaaggagaaacagcccttcgagaggctg
gaggtcagcaaggagaccctactgaagatgtttaagtacaacaaattcaagtgtcgcatt
ctgaatgagaaagtcaccacacccactacaacagtctacagatgtgggcctctgatagac
ctgtgtcgtgggccccatgtaagacacacaggaaagattaaagccttgaagatctacaag
aactcttctacgtactgggagggccgttcggacatggagaccctgcagcgtatctacggc
atctccttcccagactccaagatgctgaaggagtgggaacgctttcaggaagaggctaga
aacagagaccatcggaagattggaaaggaacaggaactgttttttttccatgacctgagc
cctggcagctgcttcttcctcccgcgtggagcctacctgtacaacacactcactgacttc
atcagggaggaatactgtagaagaggtttccaggaggtggcgtctcctaacatctataac
agtaagctgtgggagacttcaggccactggcagcactacagcgacaacatgttctccttc
ccagtggagcaggatgtctttgcactgaagcccatgaactgtcctggacactgtctgatg
ttcagccacagacctcggtcgtggagggagctgcctctgagactggctgatttcggggtg
ctccataggaacgagctatcagggacactcaccggccttacgagggtgcgccgcttccaa
caggatgatgctcacatcttctgcaccatggaacagattgagtctgagatgaagggctgt
ctggacttcctccgctgtgtctatgatgtctttggcttctctttccagctgcacctttca
acccgtccagagaagtacctaggagatatcgctatctggaaccaggctgagaagcaactg
gagaacagcctgaatgagtttggggaaccatggaaactaaaccccggagacggtgctttc
tatggacccaagattgacattaagatcaaagatgctattggccggtatcatcaatgtgca
accattcagctggacttccagcttcccatccgctttaacctgacctttgtagggaaggac
ggggatgacaaagcgaagccggtcatcatccaccgggccattctgggctctgtggagagg
atgatagccatcctcactgagaactacgctgggaaatggcccctctggctgtccccacgt
caggtgatgtttgtacctgtcaaccctacctgtgaagaatatgccaagaggatgtgtaaa
cagtttgtggaggccggattcatggcagacgctgatctcgactccagttgcctcttaaac
aagaagatccgcaacgcccagttagcccagtacaacttcatcctggtggtcggtgagaaa
gagaagctgactaacggcgtgaacgtacgtacgagggacaacaaggttcatggagagctg
tctgtttctgaggtgctggctcgcctgaccctgttgaaagagtcacgctgcaggaatgct
gaggaggagttctga
DBGET
integrated database retrieval system
