Salvelinus fontinalis (brook trout): 129854586
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Entry
129854586 CDS
T11136
Name
(RefSeq) RNA-binding protein NOB1-like
KO
K11883
RNA-binding protein NOB1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129854586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfon03009
]
129854586
03051 Proteasome [BR:
sfon03051
]
129854586
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
129854586
Proteasome [BR:
sfon03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
129854586
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
HypA
DZR_2
Zn_ribbon_8
DZR
DUF7129
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
129854586
NCBI-ProteinID:
XP_055777793
LinkDB
All DBs
Position
4:<86850471..86864494
Genome browser
AA seq
447 aa
AA seq
DB search
MAATMVEHVVVDAGGFLKKAPLQEIGKNIYTLKDVVEEIRDKPTRRSLSVLPYKLNFKEP
YPEDIRLVTEFSKKTGDYPSLSATDIKVLALAYQLEREHVGTDHLRKEPEVKVQVSSTRR
HPEAPVGVAGFHFPSKRPADGLFSGRQRPAAQTPAAQTPAAQTQHSYNPPEIAEYNSFQF
WRNPLPCFDTDLLELVDIQDLSISDGAADTVHTEPGTGTGSEEHGSGSEEEEEEDEEEEE
DGGGWITPSNIKQVQMETGIWASPADVKVACLTTDFAMQNVLIQIGLHVLSVNGMLIKQA
RNYILRCHACFKTTTNMNKVFCPHCGNRTLKKVAVTVSEDGSIQMHLSKNPKVLNPKGKR
YSLPLPQGGKHGSNPHLVEDQRFPQQRVSRKARQKTDVLNPDYLAGGGSPFSDHDIYSRS
ANLHITDGAGGGGRRRANPNAARKKKC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccatggtggaacatgttgtcgtagatgcgggaggatttttgaagaaagca
cctcttcaggaaatcgggaagaatatctacaccctgaaggatgtagtagaggaaattaga
gacaagccaacgcggaggagtctgtcagtcctaccttataaactcaacttcaaagagccg
tacccagaggacatccgattagtgactgagttctccaagaagactggagactaccccagc
ctatctgccacagacatcaaggtgttggctctagcataccagttggagagggaacacgtt
gggacggaccacctgaggaaagaaccggaggtcaaggtccaggtatccagtaccaggaga
catccagaggctcccgtcggcgtggcaggattccacttcccctcaaagaggccagcagat
gggctgttcagtggcagacagaggccagcagcacagacgccagcagcacagacgccagca
gcacagacgcagcacagctataaccctccagagatcgcagagtacaacagcttccagttc
tggaggaaccctctgccctgcttcgacactgacctgctggaactagtggacattcaggac
ctgtcaatatcagacggagcagcggacaccgtccacacagaacctgggactgggaccggg
tcagaggagcacggcagtgggtcagaggaggaggaggaggaagatgaagaggaggaggag
gatggcggcggttggatcacccctagcaacattaaacaggttcagatggagacggggatc
tgggcgtcgcccgcggacgttaaagtggcgtgtctcaccaccgacttcgctatgcagaac
gtcctgattcagatcgggctccatgtcctctctgtgaacgggatgctcatcaagcaggcc
aggaattacatcctgcgatgtcacgcctgtttcaagaccaccaccaacatgaataaggtt
ttctgtccacactgtggcaacagaacgttgaagaaggtggccgtgacggtcagcgaggac
ggaagcatccagatgcatctctcaaagaaccccaaagtgctcaaccccaaagggaagagg
tactccctgcccctgccacaagggggcaaacacggcagcaacccccacctggtggaggac
cagcgtttcccccagcagcgtgtgtcccgtaaggcccgccagaagacggacgtcttaaac
ccagactacctggccgggggcggctcacctttctctgatcacgacatctacagccgctct
gccaacctgcacatcacagacggagctggcggaggggggcggaggagggccaaccccaac
gctgcccgcaagaagaaatgttga
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