Salvelinus fontinalis (brook trout): 129854712
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Entry
129854712 CDS
T11136
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129854712 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129854712 (smarcd2)
03036 Chromosome and associated proteins [BR:
sfon03036
]
129854712 (smarcd2)
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129854712 (smarcd2)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129854712 (smarcd2)
PBAF complex
129854712 (smarcd2)
GBAF(ncBAF) complex
129854712 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129854712
NCBI-ProteinID:
XP_055777874
LinkDB
All DBs
Position
1:42427717..42451880
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AA seq
494 aa
AA seq
DB search
MASRGGFPATQMNPSVNPMNAGHAGGGMRMPGIQQNSGFRAMNATPQYHQHPGMPPNRGI
PMGPIGGPGPSYGGGNMPLRIGMGQSAMDASRKRFLQQQPQGGLGGPRRGKRRRMADKVL
PQRIRDLVPESEAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQKRKLRIYISNTYTPG
KPEGEEAEKVSSWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRM
PTTQETDGFQVKRPGDVSVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQALWL
YIKNNKLQDSHEKEYINCNRYFRQILGCTRMRFSEIPMKLAGLLQHPDPIIINHMISVDP
NDQKKTACYDIDVEVDDPLKAQMNSFLSSTTNQQEIAALEMKIHETIESINQLKTQRDFM
LSFSNNPQDFIQDWLKSQSRDLKLMTDVAGNPEEERRTEFYQAPWVPEAVGRYVYSKVQQ
RRQELEQVLGIRLT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagagggggctttccggctactcagatgaaccccagtgttaaccccatgaac
gctggacatgcaggcggtggaatgaggatgccagggatccaacagaattcgggtttccga
gccatgaatgccactcctcagtaccatcagcaccctggtatgccacccaacagggggatc
ccgatggggccaattgggggccctggaccctcttatgggggcgggaacatgcccttacgc
ataggaatggggcaatcagccatggacgcctcccgaaagcgattccttcaacaacaacca
cagggggggctgggaggcccaaggcgtggcaaaaggcgcaggatggccgacaaggtgcta
ccacagaggatccgagacctggttccagagtctgaggcctatatggacctgctggccttt
gagaggaagctggaccagaccatcgcccgcaaacgcatggagatccaggaagccatcaaa
aagcccattacgcaaaagcgaaagttgaggatctacatatccaacacctacacacccggc
aagccagaaggcgaagaggcagaaaaggtgtcatcctgggaactaagggtggaggggaaa
ctccttgaggatcctgggaaacagaagaggaagttttcgtctttctttaagagtctggtc
attgagctcgacaaggaactgtatggacctgataaccacttggtagagtggcacaggatg
cccaccacccaggagacagacggcttccaggtgaagagaccaggggacgtgagcgtgaaa
tgcaccctcctcctaatgctggaccaccagcccccacagtacaagctggacccaagactg
gcccggctgctaggtgtacacacccagacacgggctagcatcatgcaggcgctgtggctc
tacatcaagaacaacaagctgcaggacagccacgagaaggagtacatcaactgcaaccgc
tacttcagacagattttaggctgcacacgtatgcggttctctgagattcccatgaagctg
gctggcctgctgcagcatcctgacccaatcatcatcaatcacatgatcagcgtggacccg
aacgaccagaagaagacggcgtgctacgacattgacgtggaggtggacgatcctctgaag
gcccagatgaatagtttcctgtcctcaactaccaatcagcaggagatcgccgccctggag
atgaagatccacgagaccattgagtccatcaaccagctgaagacccagcgagacttcatg
ttgagcttcagcaacaacccgcaggacttcatccaggactggctcaagtcccagagtcga
gacctcaagttgatgacggacgtggcaggtaacccagaggaggagaggaggactgagttt
taccaggccccctgggtaccagaagctgtaggccgatacgtctactctaaggtgcagcag
agaagacaggagttggagcaggtgctgggaattcgactcacctga
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