Salvelinus fontinalis (brook trout): 129854795
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Entry
129854795 CDS
T11136
Symbol
cnga1a
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
129854795 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129854795 (cnga1a)
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129854795 (cnga1a)
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Pex16
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
129854795
NCBI-ProteinID:
XP_055777918
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Position
5:50062922..50073286
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AA seq
684 aa
AA seq
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MISTSSTRPFLAVAPRISPNMATDTEEDSEDEIDETSPGPGRLFNVNNSNNNEEEEKKNK
KKEKKEKKEKKEXAPKLKKKEKKKQKEQEEKEKEEKEKQEKEKEEKEKKEKEEKEKKEKE
KKEGPKEVFFINPAGSLYYNWLFIITIPVMYNWTMIIARACFEELQHNHLVTWMILDYIS
DVLYLADMAFRTRTAYLEQGLLVKDKKLLWERYISSLQFKLDAVSMLPTDVFYIYLGINY
PEIRLNKLLRITRMMEFFTRTETKTNYTNLFRISNLVMYIIIIIHWNACLYYSFSKSIGF
GSDPWVYPDLNDPEEPEFGELGRKYSFSLYWSTLTLTTIGETPSPELDSEFFFHVLDFLV
GVLIFATLVGNISSMISNISAARVEFQARIDNIKQYMQKWKVDKELELRVITWFDYLWTN
DKAQDERETLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLIELVLKLQPQVFSPGD
YICKKGDIGREMYIVKEGKLAVVADDGVKQFCVLGDGSYFGEISILAIKGSKAGNRRTAN
IRSIGYSDLFCLSKDDLMESLTEYPEAKGMLEEKGRQILLKDGLLELDPSKIIPETTEIE
EKVNRMYSNLELMQTKLKKLLGDYSISQRATRERIAEIERLTGEVVAEEDLDEEEKEGGE
EEKKEGEAEEKKDEEKKEEEEEKK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcacatcaagcactcgtccgttcctggcggttgcgcctcgcatttctccaaac
atggccacagacacagaggaggacagtgaggatgaaatagatgaaacttctcctggccca
gggcgtctgttcaatgtgaacaacagtaacaacaatgaggaggaggagaagaaaaataag
aaaaaggagaagaaagaaaagaaagagaaaaaagagtaagcacctaagttgaaaaagaaa
gaaaagaagaagcagaaagagcaggaggagaaagaaaaggaggaaaaagaaaagcaggag
aaagaaaaggaggagaaagaaaaaaaggaaaaagaggaaaaggagaaaaaggagaaagag
aaaaaggaggggcccaaagaagtgtttttcatcaatccagcgggcagtctgtactacaac
tggctgttcattatcacaataccagtcatgtacaattggaccatgataatagccagagcc
tgctttgaggagctgcagcataatcacctagtcacctggatgattctggactacatctct
gatgtcctctacctggctgacatggccttcaggaccaggacagcctacctggagcaaggc
ctgctggtcaaagacaagaagctgctgtgggagcgttatatcagcagcctccagttcaag
ctggacgccgtctccatgctgcccaccgatgtgttttacatctacctggggatcaactac
cccgagatccgcctcaacaagctcctccgaatcacgcgtatgatggagttcttcacccgc
accgagaccaagaccaattacaccaaccttttccgcatctccaacctggtcatgtacatc
atcatcatcatccactggaacgcctgcctctactactccttctctaagtccatcggcttc
ggctctgacccctgggtctacccggacctgaatgacccagaagagccagagttcggcgaa
ctggggaggaagtactccttcagcctctactggtccacgctgacgctgaccaccatcggc
gagacgccatcaccggagctggactcagagttcttcttccatgtgctggacttccttgtg
ggtgtgcttatcttcgccaccctggtgggcaacatcagctccatgatctccaacatcagc
gccgcgcgggtcgagtttcaggcacgcatcgacaacatcaagcagtacatgcagaagtgg
aaggtggacaaggaactggagctgcgagtcatcacgtggttcgactacctgtggaccaac
gacaaggctcaggacgaaagggagacgctgcggtacctgcccgacaagctcagggccgaa
attgccattaacgtccacctggatactctcaagaaggtccgcatcttcgctgactgtgaa
gcgggcctgctgattgagctggtgctcaagttgcagccccaggttttcagccctggcgac
tacatctgtaagaagggcgacatcggccgtgagatgtatattgtcaaggagggcaagctg
gcggtggtggctgatgatggcgtcaagcagttctgcgtgctgggagacggcagctacttt
ggggagatcagtatcctagcgataaagggttctaaggcagggaaccggaggacggccaac
atccgcagcattggctactcagatctcttctgcctgtccaaggatgacctgatggagtca
ttgaccgagtacccggaagccaagggcatgctggaggagaaaggtcgtcagatcttgctg
aaggatggcctgctggaactggacccttccaaaattatccccgaaaccacagaaatcgag
gaaaaggtgaaccgcatgtacagcaacctggagttgatgcagaccaagctgaagaagctg
ctgggagactacagcatcagccagagggccacgagggaacgcatcgctgagatagagcgg
ctgactggagaggttgtagccgaggaggacctagatgaggaggagaaggagggaggggag
gaggagaaaaaagaaggggaggcagaagagaagaaggatgaggagaagaaagaggaggag
gaggagaagaagtag
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