Salvelinus fontinalis (brook trout): 129854816
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Entry
129854816 CDS
T11136
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
129854816 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129854816 (myo5c)
04131 Membrane trafficking [BR:
sfon04131
]
129854816 (myo5c)
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129854816 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129854816 (myo5c)
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
129854816 (myo5c)
mRNA cycle factors
P-body specific factors
129854816 (myo5c)
Membrane trafficking [BR:
sfon04131
]
Others
Actin-binding proteins
Myosins
129854816 (myo5c)
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
129854816 (myo5c)
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
129854816 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
Motif
Other DBs
NCBI-GeneID:
129854816
NCBI-ProteinID:
XP_055777934
LinkDB
All DBs
Position
5:complement(1191660..1226741)
Genome browser
AA seq
1417 aa
AA seq
DB search
LQSSDQHLAAFCDLLGVSPDGVTRWLCHRRIAMVAETVVKPVPGERAVSARDALAKQIYA
HLFDCVIQKINAALQVPGKQHSFIGVLDIYGFETFNINSFEQFCINYANEKLQQQFNLHV
FKLEQDEYMKEDIPWTLIDFYDNQPVIDMIEAKMGILDLLDEECLFPQGTDQNWLQKLYN
YLADNPLFEKPRMSNKAFIIQHFADKVEYQCWGFLEKNRDTLYEELVDTMRTSTFPLLAN
FFLEVEPDGLGSKGIKVRPARPRVKPANKNHRTTVGEKFSSSLYLLMETLNATTPHYIRC
IKPNEEKMPFEYDSKRVVQQLRACGVLETIHISAQSYPSRWTYIEFYSRYSILMSQEELG
LNHKKLACKTVLQRLIQDSDQNKFGRTKIFFRAGQVAYLEKLRLDRLRKACLTIQKHVRG
WSHRRKFLRMREAAIVLQQYVRGQRQICKTVTAAALKQGWAAVVIQRYWRSYLIRQIYRM
VRFSSIIIQAFTRGWIARKRYKKMVEVQKTIILQKYARAWLARRRFQSLRRLVHNVQLSY
RCQQLRKKLEDQAKENRGLLERLTGLAGAHAQGLDKLRCLEAQLGKSATEKASLEEREKK
SKEDATKTIAQLQEEKDKLIVEKQNLEKKLADSATEMKDDFDQIKTTLKEDLEREERLRK
IAENNLDLQKEDHEKEVEVLREDHEKEVELQKEDHEKEVEVLREENRRLKEERVGLQKQT
EEEAQVNTDLQDQVIQLTKHVKVIPELRKELHNLQTQRDDLGRKMKKQSEQARAKISVIT
RQLLCGMVEEEEVISRLTSDSPDQIYEVGDLLTAFDGLQKATRVLERHQQEQKEGYDSQM
EGLRFKVEHLQNENNQLQKLFQEKTSVNDSISQEVARLNTEHMVIPELKKQLSELRQHKQ
ELEVQLEEQARKMTEEMEEISKELQMNVEEEGSQSRVKEEVKTEKEEVEREKEEMEREKE
EVEREKEEMEEVLRKQKNIESEAKGRFSQEASRLTAENMDFEEQLDMKDRLMRKLQNQIK
SLQTSEEANQTPAPTITNEYLGMLAYKREDEAKLIQYVILDLKPRGVLVNMIPNMAAQLL
FMCVRHADYLNDGAKLKSLMNAIISGVKKVITDHQEDFELLSFWLSNMYHMLSCLKQYSG
EEEFMKQNTPRQNKNCLRNFDLSEHRQIFSDLAIRIYHQFISVMENNLIPMIVPCMLEHD
SLQDMSSMTPTGSRKRSSSIYEDQEVCTIYSLLQQLSLYHSTMSLHGMEEGLVRQAVKQT
FFLVGADTLNNILLRKDMCSCRKGMQIRSNISYLEAWLKEKDLVQGTMATLKPLSQAAWL
LQVNKTTDDDIKDITEHCSELSPVQIVKILNFFEKRVAPSFVRKVQGLLQDREGGSSQLM
LDTQYRFQVTFPFTPSSQALELLQIPSSLKLGFLTRI
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
ctccagtccagtgatcaacacctagctgctttctgtgaccttctcggggtcagtcctgat
ggtgttacccgttggctatgccatcgcaggatagccatggtggcagagacggtggtgaag
ccggtgcccggtgaacgggctgtgagcgccagagatgccctcgccaagcagatctatgcc
cacttgttcgactgcgtcatccagaagatcaatgcagccctgcaggtgccagggaaacag
cactccttcataggagtactggacatctatggatttgaaacatttaacatcaacagtttt
gaacagttttgcatcaactacgccaacgagaagcttcagcaacaattcaacttgcatgtg
ttcaagctggagcaggacgagtacatgaaagaggatattccctggactctgatagacttc
tatgataaccagccggtcattgacatgattgaagctaagatgggcatcctggacctgctg
gatgaagaatgcctgttcccccagggtacagatcagaactggcttcagaagctgtataac
tacctggctgacaaccctctgtttgagaagcccaggatgtccaacaaggccttcatcatt
caacactttgctgacaaggtagaatatcaatgctggggttttctagagaagaacagagac
acattgtatgaagagctggtggataccatgagaaccagtacgtttcctctcctggccaac
ttcttcctggaggtggagccagatgggttgggcagtaaaggcatcaaagtgaggcctgcc
cggcctcgggtgaaaccagccaataagaaccacaggaccactgtgggagagaagttcagc
agttctctgtacctgctgatggagactctgaacgccaccacccctcactacatacgctgc
atcaagcccaacgaggaaaagatgccgtttgagtatgactccaagcgggtggtccagcag
ctgagggcgtgtggagtcctggagaccattcacatcagcgctcagagctacccttccagg
tggacgtacatagagttctacagccggtacagtatactgatgagtcaagaggagctgggc
ctcaaccacaagaaactggcctgtaagacagtgctgcagaggctaattcaggattcagac
cagaacaagtttggccggaccaagatcttcttccgagcgggtcaggtggcctacctggag
aagcttcgattggaccgtctccgaaaggcatgtctgaccatccaaaagcacgtgaggggg
tggagccacaggaggaagttccttcgcatgagggaggcggctatcgtcctccaacagtac
gtccgtggacagcggcagatatgtaaaacggtgacggctgcagcgttgaagcagggctgg
gctgctgtggtcattcagaggtactggagaagttatctgatcagacagatctatagaatg
gtccgtttctcctctatcatcatccaagccttcactagaggctggatcgccaggaaacgc
tacaaaaagatggtggaggtgcagaaaacaataatcttacagaagtatgcccgggcgtgg
ctcgccaggagacgcttccagagcctgcgccgcctggtacacaatgtacagctctcctac
aggtgccagcagctcaggaagaaactggaagatcaggccaaagagaaccgtgggctgttg
gagaggctgacaggtctggccggtgctcacgcccaaggtctagacaagctgcgctgtctg
gaggcccagctggggaaatcagccactgagaaggcttcgctagaggagcgagagaagaag
agcaaggaggatgccacgaagacgatagctcagcttcaagaggaaaaagacaaattaatc
gttgaaaagcagaacttggaaaagaagcttgcagattcagcaacagagatgaaagacgac
ttcgatcaaatcaagacaactctgaaagaagatttggaacgagaagaaagattgaggaag
attgcagagaacaaccttgacctgcagaaagaggaccatgagaaggaggtggaagttctg
agggaggaccatgagaaggaggtggagctgcagaaggaggaccatgagaaggaggtggag
gttctgagggaggagaacaggaggctgaaggaggagagagttggcctacagaaacagaca
gaggaggaggcgcaggtcaacactgatctacaggaccaggtcatacagcttaccaagcac
gtcaaggtgatacccgagttacgtaaagagcttcacaacctgcagacccagagagatgat
ctgggcaggaagatgaagaagcagtcagaacaggccagagccaagataagtgtgatcaca
agacaacttctttgtggcatggttgaagaggaggaggtcatttccaggttgacctctgac
agtccagaccagatctatgaagttggggatttgttgactgcatttgatggactgcagaaa
gctaccagagtgctggagagacaccagcaggaacagaaggagggttatgacagccagatg
gaggggctgaggttcaaggtggaacacctgcagaacgaaaacaatcagctgcagaaactg
ttccaggagaaaacgtctgtcaacgacagcatcagccaggaggtggccaggctcaacacg
gaacacatggtcatacctgagctgaagaagcagctgtcagaactacgacaacataaacag
gagctggaagttcaactggaggagcaggctagaaagatgaccgaagaaatggaggagatt
tcaaaagagcttcagatgaatgttgaagaggaaggctcccaaagcagggtgaaggaggag
gtgaagacagagaaagaggaggtggagagagagaaggaggaaatggagagagagaaggag
gaggtggagagagagaaggaggagatggaggaggtgctcaggaaacagaagaacatagag
agcgaggccaagggcagattcagtcaggaggcatcacgactcacggcagagaacatggac
tttgaagagcagctcgacatgaaggacaggttgatgaggaagctacaaaaccaaatcaag
agccttcaaacatccgaggaagccaatcaaacaccagcgcccactattaccaacgaatac
cttggcatgttggcgtacaagagggaggatgaagccaagctcattcaatacgtcattctg
gacctgaaacccagaggggtactggttaacatgatccccaacatggctgcacagcttctc
ttcatgtgtgtccgtcacgctgactaccttaacgacggagccaagctcaagtctctcatg
aacgccatcatcagtggggttaaaaaggtcatcacggatcaccaagaagactttgagttg
ctatcgttctggctgtccaacatgtatcacatgctcagctgcctgaagcagtacagtgga
gaagaggagtttatgaaacagaacactccgcgtcagaacaagaactgcttgcggaacttt
gacttgtctgaacacagacagatcttcagtgatctggccatccgtatctaccaccagttt
atatctgtcatggagaacaatcttatacccatgatcgttccttgtatgctggagcatgac
agtctccaggacatgtctagtatgacgcctacaggttcccgtaagcgttccagcagcatc
tatgaggaccaggaggtctgcaccatctactctctcctccagcagctcagtctgtaccac
agcactatgagtctgcacggcatggaggaggggctggttagacaggctgtgaaacagacc
ttcttcctggtaggtgcggacacactcaacaacatcctgctacgcaaagacatgtgctcc
tgtaggaagggcatgcagatcaggtctaacatcagttaccttgaggcgtggctaaaggag
aaggacctagtgcagggtaccatggctactctgaagcctctgtctcaggctgcctggctg
ctgcaggtcaacaagaccactgatgacgacatcaaagacatcacagagcattgctcagaa
ctcagccctgtacagattgtcaagattttgaacttttttgagaaaagggtggcaccgtca
ttcgtccgcaaagttcagggcttgctccaagaccgtgagggcggatcctcccagctgatg
ctggatacccagtatcgtttccaggtcaccttccccttcaccccgtcctctcaggccctg
gagctactgcagataccatccagcctcaaactgggcttcctcaccaggatctaa
DBGET
integrated database retrieval system
