Salvelinus fontinalis (brook trout): 129854908
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Entry
129854908 CDS
T11136
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
129854908 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129854908 (fan1)
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
129854908 (fan1)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
129854908 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
MFS_3
DUF913
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
129854908
NCBI-ProteinID:
XP_055778039
LinkDB
All DBs
Position
5:complement(3175309..3192396)
Genome browser
AA seq
1068 aa
AA seq
DB search
MAEKGNKRKQRSLSVTKTKGYVSSKDGKKSANACPGTASISSFFNNAPPPRLPCPLCGQL
VPRFRINQHIDSQCQNFQREDGASIDTASACNIVTTTKLASSHSPSRRASKVHDPDTGPS
CPKEEKPQREPNTSPYFKKSGASSQQVNTREMSSKTVVRPIDIGSRLSSKLSRRGLKQRL
KSPEDLQSQVDDIITIQESPERDRRSEELSSSQKENHLPQGFGDQTTCLMDTETTNVTVE
SHSTISLGRPQVESREETLECLESKSESKLESLSPVVSMAPRPLSYAPSRLNKRKKGGKA
EVSVKTQRMSTRSKKGRCEKSDGEEPDDDLARNKLLTSTTTADDDKQHGTEESSTALLKS
STEVPEEERQRRKVKLEEEGEQEEKEEESTVTGSSDQLTEPDTDRRTDKQDSESPRLPYY
LGNFLTVLEAVLENEDDRMLFNQEDLSAIHGFERLTVTGQKLYVRLFQRKLKWLQVNKLN
YNEISTDLGPVAQELVEGGFLQTDSDLQELEEVLDLLPAPELRSLAKTFHLGGPGSGTQK
HQLVEGLLKLSRQRSLFALAPGQNNIGTVILKRAKQLAGSCVRLHRGPRAVFSRVLLLFS
LTDGLEEEETAGGGQGQLYTILLVNSGRLAFPDYTVQRRAKLFLDREDLIRYEAAMRALQ
EVITAMQTGHWEDALVLYTAAKTTWQEMSKTYDLSHQEELPVFLRCFTTGWAYTRILSRG
VEVLQRLRCYKEAVKELRSLLAQSVYCPDSRGRWWDRLALNLQQHLKLPEQAISSIRDGL
SDPLVRTGHQLSLHQRANRMKESPSYKNYHHVLRDLPTIHVNDVTHVTIRGQLFPHEGGT
GKNVFLMPAEEEGAEGGYSTVMCSVEELSLAHYRRQGFDQGIHGEGSTFSTLFGLLLWDV
IFMEGIPDVFRNPYQPCPLDLFTDCFYGNRREAIEMRVQVLCEASIETLHNLMAEAWTNQ
EGRVCSLVNWERFASLQRAQSLVSCLGGSFLGGMITRMAKDYRHCRAGLPDLVVWNTSNN
TYKLVEVKGPSDKLSQKQQIWLDELQRLGADVEVCHVTATGARGAWLE
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaggaaacaaacgcaaacagagaagcctgtcagtaacaaagacaaaagga
tacgtcagtagtaaagatggtaagaagagtgccaatgcatgtcctggtacagcctccatc
tcatcattcttcaacaacgccccgccacctagactgccatgtcctctgtgtggtcagcta
gtgccacggttcaggataaaccaacacattgactcacagtgtcagaactttcagagggaa
gatggtgcgtccattgatactgcttcggcctgtaacattgttactacaacaaagctggca
tcgtctcactctccttccaggagggccagtaaggtccatgatccagacacagggccttcc
tgtccaaaggaggaaaagcctcagcgagagcccaacaccagcccgtactttaaaaagtct
ggtgcttcttctcagcaggtaaacaccagagagatgagcagtaagactgtagtcaggccc
attgacataggtagcaggctgtcctctaagctctccaggaggggcctgaagcaaaggttg
aagtcccctgaggacctacagtcgcaggttgatgacatcatcaccatccaggagtcccca
gagagagacagaaggtctgaggagctgagcagctctcagaaggagaaccacctccctcaa
ggatttggtgaccagacaacatgcttaatggacacagagacaacaaatgtcacagtggaa
agtcacagtactatttcactgggcagacctcaggtagaaagcagagaagaaactttggaa
tgtttagaatccaaatctgaatctaaattagaatcattgtctccggtagtttctatggcc
ccgcgacctctgtcctatgctccatccagactgaacaagaggaagaaaggagggaaagcg
gaggtctctgttaaaacacagaggatgtctactcgcagcaagaaaggcagatgtgagaag
agcgatggtgaagaaccggatgatgacctcgctagaaacaaactccttacgtcaacaaca
acagctgatgatgataagcaacacggaacagaagaatcttcaactgctcttttgaagagc
agcacagaggtgcctgaggaggagcgtcagagaagaaaagtaaaactagaggaagaagga
gaacaagaagaaaaagaagaagaatccacagtgaccggtagcagtgatcagctgacagag
cctgacacagacagaagaactgataagcaagattcagagtcaccgcggttaccgtactac
ctgggtaacttcctgaccgtgctagaggcagtgctggagaatgaagacgataggatgctg
ttcaatcaagaagacctttcagccatacacggctttgagcgtctgacagtgacaggacag
aagctgtatgtgagactgttccagaggaaactgaagtggctccaggtcaacaagctaaac
tataatgagattagcactgacctgggacctgtagctcaggagctggtggaaggaggtttc
ctacagacagacagcgacctccaagagttggaggaagtgctggacctgctgcccgccccg
gagctccgtagccttgctaagacgttccacctggggggccctgggtctggtacccagaaa
catcagctggtggagggactcctgaagctgagcagacagaggtctctgttcgccctggcc
cctggacagaacaacattgggactgtcatactgaagagggccaagcagctagctggttcc
tgtgtacgtctgcatcgcggccccagggctgtgttctctcgcgtcctcctactcttctcc
ctgacagacggtctggaggaggaggagacggccggagggggtcaaggtcagctctacacc
atcctactggtcaactctggccgactggcattccctgactacaccgtacagcgcagagcc
aaactgttcctggatagagaagatcttatcaggtatgaggcggcgatgcgagcgctgcaa
gaggtgatcacagccatgcagacaggccactgggaggacgctctggtactttacactgca
gccaagacgacctggcaggagatgagcaagacgtacgacctcagccaccaggaagagctg
ccagtgttcctgcgctgtttcaccacagggtgggcctacacacgcatcctgtccagggga
gttgaagtactacagagactacgttgctacaaggaagcggtgaaggagctgcgctcccta
ttggcccagtcagtctactgtccagacagcagggggcgatggtgggacagactggcactc
aatctccagcagcacctcaaactacctgaacaggctatcagctccatcagagacggtctc
tctgaccccttggtgaggacgggccaccagctttcactccaccagagagccaataggatg
aaggaatcccccagctacaagaattaccaccatgtactccgtgacctgcccaccatccac
gtcaacgacgtcactcatgtcactatccgagggcagctcttcccccacgagggggggaca
gggaagaatgtgttcctcatgcctgctgaggaggagggggcagagggaggatactccact
gtcatgtgttctgtggaagagctgtcactggcacactaccgtcgtcaaggctttgaccaa
gggatccatggagagggctccacgttttccactctgtttggtcttctcttatgggacgtc
attttcatggagggtattccagacgtcttccggaatccctaccagccctgcccactggac
ctcttcacagactgtttctatgggaaccggagggaagcgatagagatgcgtgtgcaggtg
ctctgtgaggcgtccattgagacgctgcacaacctgatggctgaagcctggaccaatcag
gaggggagggtgtgttcactggtcaactgggagcgcttcgcatccctgcagcgggcacag
agtctcgtgtcttgtctgggtggatcgtttctgggagggatgatcactaggatggccaag
gactacagacactgtcgagcaggactgcctgacctagtggtgtggaacacatccaacaac
acctacaagctggtggaagtgaagggtcctagcgacaaactgtcccagaagcaacagatc
tggctggatgagctacagagactgggggctgatgtagaggtctgtcacgtcactgccacc
ggggccagaggagcttggctggaatag
DBGET
integrated database retrieval system
