Salvelinus fontinalis (brook trout): 129855049
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Entry
129855049 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129855049
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129855049
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129855049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
zf-RING_5
zf-rbx1
EIF3I
zf-C3HC4_3
zf-C3HC4_2
Beta-prop_WDR3_1st
zf-RING_11
Beta-prop_WDR3_2nd
CFAP43_N
zf-RING_Vps41
Beta-prop_WDR75_1st
WD40
zf-C3HC4_4
zf-ANAPC11
WD40_2
Rtf2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_Prp19
Zn_ribbon_TiaS
Beta-prop_WDR36-Utp21_1st
Beta-prop_ACSF4
Beta-prop_WDR36-Utp21_2nd
DUF6779
NBCH_WD40
Rab11-FIP3
Motif
Other DBs
NCBI-GeneID:
129855049
NCBI-ProteinID:
XP_055778296
LinkDB
All DBs
Position
5:9249424..9266382
Genome browser
AA seq
709 aa
AA seq
DB search
MEAMEVDLQLGVPRREPEPDAMAGNVELPIIIPDSGSETEVEDEADAAPLDPPRLPTTWA
FSQNRIRVEGQVGPRIRMEGHIGPSVTTAAALRQRRARPGVRALYPTQTSPSASRFLDFL
LRVPAANPDSGNTTESSESEDEADPHDPDEPAVPSSLGINPPVAATPLQGLNPSDSNATT
VAARTETGNQVNPESVTAPVATSGAALRSSQGDEGEGETCSICFEPWTTSGEHRLATLRC
GHLFGYTCIGRWVKGQGQGAKCPQCNKKAKRSDIVLLYARKLRAVDNTEQENMKRSLEQE
QSMRRNAELESAQCRLQLQVMTDECGKLRKQIQELKTLMAQPGCRPSKNSGASLSGLSQR
QDSTQGGHYVFSKAVLVSQAGGCRVLSYCEPLSCLLASLPSPHTTLVPGYGVKKVSTVNL
KACQYVPIHVKQIRGLAFNRQADSLLLSAALDNTIKLTSLMTNTVVQTYNTGKPVWSCCW
CLDNNNYVYAGLSNGSVLVYDTRDTSTHVQELQPLRSRCPVASLSYVPRASSSSFPCGGL
IAGSLEGGCFWEQVDSTTYRPHILPLETGGCTDIQVEPESRHCLVTYRPGRSNPSLRCVL
MELNRTLQQDVAQEPLCSCYPVQTFSAGSSCKVLTKNAVFRSPAGKGSTLVCAGDESTNS
TMVWDAGSGSLIQKLPADLPVLDICPFEVNQGSYLASLTEKMLKIYKWE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatggaggtggacttgcagctgggggtccccaggagggaaccagaaccagat
gctatggcaggcaatgtggagctccctatcatcatccctgactctggcagcgaaactgag
gttgaggacgaggcagacgcggctcccctagacccgccacgactcccgaccacctgggcg
ttcagtcagaaccgaatcagagtggagggtcaagttgggcccaggatcagaatggagggt
catattgggcccagcgtcactacagcagcagccctgaggcagcggagagccaggccaggc
gtcagggcgctctaccccacccagacctctccctctgctagccgcttcctagatttcctg
ctgcgagtccctgcagccaaccctgactctggcaataccactgagtcgagcgagtcagag
gatgaggcagacccccacgaccctgacgaacctgctgttccctccagcctaggaattaac
cctcctgtggcagccacgccactgcaaggcctaaatccttcagattctaatgcaaccaca
gtggctgcgaggacagagactggaaatcaagtgaatcctgagagtgtaacagccccagtg
gccaccagtggtgcggctcttcgttcgtcccaaggagatgagggggagggggagacctgc
tctatctgctttgagccctggaccacgtcaggggagcaccgcctggccaccctgcgctgc
ggacatctcttcggctacacctgcattggccgctgggtgaagggccagggccagggagcc
aagtgtccccagtgcaacaagaaggccaagcgctctgatatcgtcctcctgtacgcacgc
aagctgagggctgtggacaacacagagcaggagaatatgaagaggtcattggagcaggag
cagtcaatgcgtaggaatgctgaactagagtcagcccagtgccggctacaactgcaggtg
atgacagacgaatgtgggaaactacgcaagcagatacaggagttgaagacactgatggcc
cagcctggctgtaggccctctaagaactcaggggcctctctctccgggctctcacagaga
caggacagcacccaggggggccactacgtcttctccaaggccgtgctagtgtcccaggcg
gggggctgcagggtgctgtcctactgtgaacccctcagctgcctgctggcctcccttccc
tccccacacaccaccctggtgcccggctacggtgtgaagaaggtgagtacggtgaatctg
aaggcatgccagtacgttcccatccatgtcaaacagatcagaggcctggcattcaacaga
caagctgacagcctcctgctctctgctgccctggacaacaccatcaaactcaccagtcta
atgaccaacacagtggtgcagacgtacaacacgggtaagccagtgtggagctgttgctgg
tgcctggacaacaacaactatgtgtacgctggtctcagtaacggctctgtgctggtgtat
gacaccagagacaccagcacacacgtccaggagctgcagccactacgctctaggtgtccc
gtggcctccctgtcctacgtgcctcgcgcctcctccagctcgttcccgtgtggcggcctc
atcgcaggttctctggaggggggctgcttctgggagcaggtggacagcaccacttacaga
ccccacattttgcccctggagacaggaggctgcacagacatccaggtggagccagagagc
agacactgtcttgtcacctacagaccagggcgctccaacccgtctctgcgttgtgttctg
atggagctgaacaggactctacagcaggatgtggcccaggagcccttgtgttcctgctac
cctgtccagaccttcagcgccggctcttcttgcaaagtgctcaccaagaacgctgtgttc
agaagcccggccgggaagggctccactttggtctgtgccggggacgagtccactaactcc
accatggtgtgggatgcagggagtggatccctgattcagaagttgcctgctgacctccca
gtgttggacatctgcccgtttgaggtgaatcagggcagttacctggcctcgctcactgag
aagatgctcaaaatctacaagtgggaataa
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