Salvelinus fontinalis (brook trout): 129855064
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Entry
129855064 CDS
T11136
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129855064 (cdhr5b)
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Cadherin related
129855064 (cdhr5b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Stevor
DUF6039
Motif
Other DBs
NCBI-GeneID:
129855064
NCBI-ProteinID:
XP_055778322
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Position
5:complement(9817100..9835599)
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AA seq
766 aa
AA seq
DB search
MEKKYPHFTLRTLLSFLLVFLLHRSTEAQQICSRPGATPPTIKENNAVGAVVTTITTEEG
VTLTIASNPADSFGLSGNDLTAVKVLDYETKTSFTVDLLCKKGDQFLTLIVVVLIENVND
NTPVFEKSQYTLNVDELSPIGKSVGAIVATDADKDRLYYSLVPDTEGFKLQENSPNILVQ
QVLDYDAVKSVTLILSAQDTPTSTPPSFTATATIQVNILDIDNRPPWFQPCTETTVDKSK
ICLSSGYTGTVNLTEQEVGALPLLPGPVHAIDGDKGLNVPIIYRFPTGSESGFFQINQNT
GDITMSKAADVAGPLTLTVLALQTSNKDQYATTTVTIVVVKKSVNPPQFERMEYEGFISA
DAGVDSMVLESKASNRPLRVQAKDTDFADGVNPDVRYEVQGSNEFSITQQGFILMTKNVM
PGTVSLNLHAIDSSNAESTTASLKVEVMPGITTVAPTTTDMATTVMATTDMATTDMATTD
MATTVMATTDMATTVMATTDMATTDMATATHAAINSTTEGVLGAPSGYGPGDMAALGASL
AVLLVISMVVIGLLIFRIQKGKTDWRKLSEANIFRSSLGKGPGGLKNGVQYTNEGFQNDG
DTNSVGSKGPEEMDGKRSIGNGVTSRAVEETVMKVSAPLYSNLLLDTGSLAGSDKADSEK
EVKPILTKERRVEEGYKSVWFKEDIDPNAKEEVVIIPDNGEREGDDDDDDDDDEEEEEGF
REEEEEEYDNSSPQTPKVLFSDADMDDGRGVRFEDSENEKIQTSDL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaatatccacactttactttgaggaccttgttgagctttctgcttgtgttt
ttgcttcacagatcaactgaagcgcaacagatatgctccaggcctggggctacgcctccc
actattaaagagaacaacgctgttggggctgttgtgaccacaatcaccacagaagaagga
gtgaccctaactattgccagtaatcctgcagactctttcggtctgagtggcaatgatctt
acagcggtaaaagttttggactatgagactaaaacgtctttcaccgttgaccttctttgt
aaaaaaggtgaccaatttcttactctaatagtagtggtacttattgagaatgtgaatgac
aacacgccagtatttgaaaaaagccagtacactctcaatgtcgatgagttgtcacctata
ggcaaaagtgtcggtgcaattgtagcaacagatgcagataaggatcgactctattacagc
ctagtgccagatacagagggttttaaactacaagaaaacagcccaaatatactagtgcaa
caagttcttgactatgacgcagtgaaaagtgtgacacttatattatctgctcaggatacc
cccacatccacaccaccttcattcactgccacagccactatccaggtcaacatcttggac
attgacaaccgtccaccatggttccagccctgcacagaaaccacagttgacaagtccaaa
atctgcctcagctctggatatacaggaacagtcaacctaacagagcaagaggttggtgca
ttgccattgctgccaggtccggtgcatgccattgatggtgacaaaggcttaaatgtgccg
ataatttacagatttccaaccgggtctgaatctggcttttttcagatcaatcaaaacact
ggggacatcaccatgtcgaaagcggcggatgtagcgggtccactgaccttaacagttttg
gctttacagacgtccaacaaagaccagtacgcgaccacaacggtcactatcgttgttgtg
aaaaagagtgtgaacccgccgcagtttgagaggatggagtatgagggcttcatctctgca
gacgcgggcgtagacagcatggttctggagagcaaagcctccaacaggccactcagggtc
caggccaaggacacagactttgctgatggcgtcaaccctgatgtgagatatgaggttcag
ggaagcaatgaattctccattacccagcaaggcttcatcctcatgactaaaaacgttatg
ccaggcactgtttccttgaatttgcatgccatcgactcatccaatgcagaatcaacaaca
gcatctctcaaggtggaggtcatgccagggattacaaccgtggccccaaccaccactgac
atggccaccactgttatggccacaactgacatggccaccactgacatggccacaactgac
atggccaccactgttatggccacaactgacatggccaccactgttatggccacaactgac
atggccaccactgacatggctactgccacccatgccgccatcaactccacaacagaaggg
gttcttggggccccaagtgggtatggtcctggggacatggctgccctgggtgctagcctg
gctgtgttactggtcatctctatggtcgtcatcggcctgctcatcttccgcatccagaag
ggcaagacagattggaggaagctgtcagaggccaacatcttccgtagctctcttgggaaa
ggtcccgggggactcaagaacggggtgcagtacaccaacgagggcttccagaatgatggg
gacactaacagcgtgggatccaaaggcccagaggagatggatgggaaacggtccatcggg
aatggagtaacctccagagctgtggaggagactgtcatgaaggtctcggctccactgtac
tccaacctcctgcttgacaccggcagccttgcagggtctgacaaggctgacagcgagaag
gaggtgaagcccatcctgaccaaggagaggcgcgtggaggagggctacaagtcagtctgg
ttcaaagaggacatcgaccccaatgccaaggaggaagtggtcatcatacctgacaatggg
gagcgggaaggtgatgacgatgatgatgatgatgatgatgaggaagaggaggaggggttt
agagaggaggaagaagaagaatatgacaactcgtcaccacagaccccaaaggtgttgttc
tctgatgctgatatggatgatggccgtggggtgaggtttgaggattctgagaatgaaaaa
atccagacgtctgacctgtga
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