Salvelinus fontinalis (brook trout): 129855080
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Entry
129855080 CDS
T11136
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta-like isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfon01009
]
129855080
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sfon00535
]
129855080
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
129855080
Protein phosphatases and associated proteins [BR:
sfon01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
129855080
Proteoglycans [BR:
sfon00535
]
Cell surface proteoglycans
Others
129855080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
PTPlike_phytase
DSPc
PTP-NADK
GUN4_N
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
129855080
NCBI-ProteinID:
XP_055778348
LinkDB
All DBs
Position
5:10085652..10205018
Genome browser
AA seq
1806 aa
AA seq
DB search
METAASRCFLLLTQLLLVCQLAGPVQGYGHRAQAAQRKFADDIDWSYAGTLNQNNWANKY
PSCSDARQSPINIEEDLTQVKVQFQKLKFEGWEEAMSDRTTIKNDGKTVAVNPEGDFYVS
GGGLRGRFKVGRITFHWGRCNASSEGSEHSLSGVKYPLEMQIYCYEALHFESIDQAIKDG
GRITALSVLLETGIEDNDNYMSIIDGVNRVSRFGKSGMVGSFSLRGLLPNSTDKYFTYNG
SLTTPPCTDTVEWIVFKNTVAISDTQLEMFCEVMTMQQAGYVMLMDYLQNNFREQQQQFM
GQVFSSYTGTEEVLTPICSSEPENVQADPHNLTSLLVMWERPRAVYDVGIEKYSVTYRLT
QGEDSATFQYLTDGDQDVGAILQDLIANTSYVVQVVAVCTNGLYGRVSEQLSVDMPFEDP
EATPYPDSTEFEWEEDYGPWAEPGEELDNDMDWTTQSTTRTRPTATTGPPSLPLPAIRTT
TPFVQRRTPTPGTPSRTTQPNRAQTSTEQSERYRSTTRAPAEGAVSAGSRGRGRTQKYTT
TLTTPQSRTDDITTSSTKTEKGRGVACPVTVPSGKGSGVSMATLLPESRTVATSTSSLSQ
GEPPWPTSPSMPLFSSTASFAGALLQTTQPVFNGELLPSTLPVCDTSTPGNPGSTPNNDP
TACLHAPPSSRPLSSVTPPALDSLHAATAMLSSGDLYLTTSPTLSLLPHTSHPLYGWETF
VSHGFGDDSGDGDMLSGSSSVASGDPPMFSDTHPLQTLRDSPTELAFRPLPATSLSLQPS
LLLSSDFSLSGATPGLTGSVSGGLGDSSYATGRVVESCLVGVVVGGVGDVRITVASDGVE
SLCTCSLDGFSSSWLHASPHLSLPTSDWWAASLALYSSGSGLDHLLHSSLGGSPNPSGGQ
PLFSSSSSPPVPPHPPLSGFHSDLLVSVTATPSGSKDHWVSALRTSAPPSSYSASPLTPT
LPPELQTVDSSASGSNLSGEAQKELDEEWDRVQSSASGEGALPYIPTFTPSLTSEAATTP
NIDTEELSSSFYFESENGSAVTTDTAGSTATVSEVTAAAPWSLGGEVESGSGQGESLYDN
ETSSDFTITERTEKDSEEEEPVAEASNSSHQSRVGLARERERRAMVPLAVVSTLTFLGLI
VLVGILIYWRKCFQIAHFYIEDNTSPRVISVSPTSMRTDTDKHKALPVKQFVKHVTELHH
TNAFSREFEILKECYEAVQVCKVDLGITTDGSNHPDNKNKNRYVNILAYDHSRVRLSTQA
DKDGKSRDYINANYVDGFNKSRAYIAAQGPLKSSTEDFWRMVWEQNVGVIIMITNLVEKG
RRKCDQYWPLESQEEYGGFLVTVKSSKVLAHYTQRTFTLRNTKVKKVSLKGRINDRTVTQ
YHYTQWPDMGVPEYTLPVLTFVQKSSKARTDDMGPIVVHCSAGVGRTGTYIVLDSMLKQI
KEEGTVNIMGFLKHIRTQRNYLVQTEEQYVFIHDALVEAILGKETEVPSSRIHSYVNDLL
TPGPSGRTQLEKQFKLISSSNAIQCDYSAALKECNREKNRNSSLIPVERSRVCLSTVAGE
TTSDYINASYLTGYRQSTEFIVTQNPLAGTVTDFWRMIWDHNAQVIVTLPGTPSLTEGEE
PYVYWPRKEQPISCEAFTVTLRSENHMCLANEEMLVVQHYVLEATQDDYVLEVRHYRAPH
WPNPDSPISSTFELLSLVKEESSSKEGPTVVHDQVGGVTAGTFCALSTLVRQLEAESTVD
VYQVAKMFNLMRPRTFTDVEQYQFLYKAMLSLVGTQEDERMHQSSDNNGTVPGGTASTAE
SLESLV
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggctgcttcaagatgtttcctattgctcactcagctcttgctcgtctgtcaa
ttagctggacctgtgcaaggatacggacaccgggcccaggccgcccagcgcaaattcgct
gatgacatcgactggtcctatgcggggactctaaaccaaaacaactgggccaacaagtac
ccatcatgcagcgatgctagacagtcgcccatcaacatcgaggaggacctgacacaggtc
aaagttcagttccaaaagctgaagtttgagggctgggaggaggcgatgtctgataggacc
accatcaagaatgacggcaagaccgtggcggtgaacccagagggggacttctatgtgagt
ggaggtgggctgaggggcaggtttaaggtggggagaatcaccttccactggggccgctgt
aacgcttcctcagagggctccgagcacagtctcagtggggtcaagtaccctctggagatg
cagatctactgttatgaagcgcttcactttgagtccatagaccaggccatcaaggacggg
ggcaggatcacagctctctctgtgctgttagagacaggcatcgaagacaatgacaactac
atgtccattatcgacggagtcaacagggtcagccgattcggtaagagtgggatggtgggt
tccttctctctccgtggcctcctgcccaactcaacagataagtacttcacctacaatggc
tccctcaccaccccaccctgcactgataccgtggagtggattgtcttcaagaacactgtg
gccatctccgacacgcagctggagatgttctgtgaggtgatgaccatgcagcaggcgggc
tacgtgatgctgatggactacctgcagaacaacttcagggagcagcagcagcagttcatg
ggacaggtcttctcctcctataccggcacagaggaggtcctcactcccatctgtagttca
gagccggagaatgtgcaggcggacccccataacctgaccagcctgctggtgatgtgggag
cggccgagggcggtgtacgacgtcgggatagagaagtactcagtcacctacaggctgacc
caaggagaggactctgcaaccttccagtacctgactgacggagaccaggatgtgggggcc
attctgcaggacctgatagccaatactagctatgtggtgcaggtggtggctgtgtgcacc
aacggtctgtacggtcgcgtgagcgagcagctgtccgtcgacatgcccttcgaagacccc
gaggcaacaccttatccagattctactgaatttgaatgggaagaggactatggaccctgg
gctgaaccgggtgaagaactggacaatgacatggactggacaacccaaagcactacgaga
accaggcccacagcaaccactggcccacccagcctccccttgcctgctatcagaaccacc
accccttttgtccagaggagaacccccacaccaggcactccatccaggaccactcaaccc
aaccgagcacagacttccacagagcagagtgagaggtaccgtagcacaaccagagcacca
gcagagggggccgtctcagcaggcagcagaggcagggggagaacccagaagtataccact
acactgaccactccgcaatcacgcactgatgacatcaccacttcatcaaccaagaccgag
aagggcagaggggtggcgtgtcctgtgaccgtcccaagcggcaaaggcagcggtgtttcc
atggccactctgctcccggaaagccggaccgtggccacttccacctcctccctctctcag
ggagaaccaccatggcctacaagtcccagcatgcccttgttttcatccactgcctccttc
gccggggcactcttgcagaccacgcagccggtgttcaacggtgagctcctcccctccacc
ctccctgtgtgtgacacgtcgacccctggcaaccccggctccacccctaacaacgacccc
accgcctgcctgcatgcccctccctcgtctagacctttgtcgtctgtgacccctcctgct
ctggactccctgcatgctgctacagcaatgttgtctagtggtgacttgtacctcactacc
tcccccaccctgtctctcctccctcacacctcacaccccctgtatggttgggagacattc
gtctctcatggttttggtgatgatagtggtgatggtgatatgttgtctggttcttcgtct
gtggcctcgggtgacccaccaatgtttagtgacactcacccccttcaaaccttacgtgac
tcccccactgagctagccttcagacctctccctgcaacctctctctccctgcagccttct
cttctcctctctagtgacttctctctgtccggggccaccccgggcctcactggctctgta
tctggcgggctgggggactctagttatgctacaggccgtgtagtagagtcttgtctggtg
ggtgttgtcgtcggtggtgttggtgatgttagaatcacggtagctagcgatggcgtggag
tcgttgtgtacctgttctctggatggcttctcgtcctcctggttgcatgcctctcctcac
ctctctctgcccacgtctgactggtgggcggctagcctagcgctctactcctccggtagc
ggtttagaccatctcctccattcatctttgggaggctctcccaacccatctggaggtcag
cctctcttctcttcctcctcttctccccctgttcctcctcatcctcctctctcaggtttc
catagtgatctgctcgtttctgttacagccacaccgtccggctccaaggaccactgggtc
tcggccctccgaacctcggcccccccctcctcctactcggcctcccccctcacccccacc
ctcccccctgaactgcagacggtggacagtagtgcctctggctcgaacctgtcgggagaa
gcccagaaggagctagatgaggagtgggacagggttcagagttcagcctcgggggagggc
gcgctcccttatatccccaccttcaccccctcactcacctctgaagccgccaccactccc
aacatcgacacagaagaactctcctcatcgttctactttgagagcgagaacggcagtgcc
gtcaccacggatacagcaggcagcacggcaacagtatctgaggtgaccgcggcggcgccc
tggtcgctaggtggggaggtggagagtggctcggggcagggcgagagcctgtacgacaac
gagacgtcctcagacttcactatcaccgagcgcacagagaaagactcggaggaggaggag
ccagttgcagaggccagtaacagcagccatcagtccagggtgggtctggccagggagaga
gagaggagggccatggtccctctggcagtggtctcaaccctcaccttcctgggactcatc
gtcctggtgggaatcctcatctactggaggaagtgtttccagattgcccatttctacata
gaggacaacacatcccccagagtcatatctgtttcacccacatccatgcgtacagataca
gataaacataaagcccttccagtgaagcagtttgtaaagcacgtgacggagctccaccac
accaatgcattctccagagagtttgagatattgaaagagtgttatgaggcggtgcaggtg
tgcaaggtggacctaggtatcaccacagacggctccaaccatccagacaacaagaacaag
aaccgatacgttaatatcctggcctatgaccacagccgagtaagactctcaacccaggct
gacaaagatgggaagagtagagattacattaacgcaaactacgttgacggtttcaacaag
tccagggcctacatcgcagcccagggccccctcaagtccagcaccgaggacttctggagg
atggtgtgggaacagaacgtgggcgtcatcatcatgattaccaacctggtagagaaggga
cggaggaagtgtgaccagtactggcccctggagagccaggaagagtacggtggtttcctg
gtgacggtgaagagcagtaaggttctggcccactacacccagagaaccttcaccctcagg
aacaccaaggtcaaaaaggtttctctgaaggggcggattaacgatcggaccgtgacccag
tatcactacactcagtggccagatatgggcgtgcccgagtacactctgcccgtgctcacc
ttcgtccagaagtcctccaaagccaggacagatgacatggggcctatcgtagtgcactgc
agtgcaggggttggcaggactggaacctacatagtgttggatagcatgctgaagcagatc
aaagaagagggcacggtcaacatcatgggcttcctcaaacacatccgcacacagaggaac
tacctggtacagacagaggagcagtatgtgttcatccacgatgctctagtggaggccatc
ttgggcaaggagactgaggttccctccagccgcatccacagctacgtcaacgacctcctg
accccagggccctccggcaggacgcagctagagaaacagtttaagctgatatcctcgtcc
aatgccatacagtgcgactactcagcagccctgaaagagtgtaacagagagaagaacaga
aactcctctttaatacccgttgaaaggtcacgggtttgtctgtccacagtggcgggagaa
actacatcagactacatcaacgcctcatacctcacggggtaccggcagagcactgagttc
atcgtgacccaaaacccgctggccggcacggtgacagacttctggaggatgatctgggat
cacaacgctcaggtcatagtcacactgccgggaacaccaagcctgacagagggggaggag
ccatacgtgtactggccccgcaaggagcagccaatcagctgtgaggcgttcacagtgacc
ctccggagcgagaaccacatgtgtctggccaacgaggagatgctggtggtgcagcactac
gtcctggaggctacacaggatgactatgttctggaggtgaggcactaccgggcgcctcac
tggcccaacccagacagccccatcagcagcacctttgagctgctcagcctagtgaaggag
gagagctcctccaaggagggccccacggtggtccacgaccaggttggcggtgttactgcg
ggaaccttctgtgccctgtctactctggtgcgccaactagaggcggagagcactgtggac
gtgtaccaggtggctaagatgttcaacctcatgaggccaaggaccttcactgatgttgag
cagtatcagttcctatacaaagccatgctgagtctggtgggcacacaggaggacgagagg
atgcaccagtcctcagacaacaacggaacagtcccagggggcaccgccagcacggcagag
agccttgagtccctggtgtaa
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integrated database retrieval system
