Salvelinus fontinalis (brook trout): 129855108
Help
Entry
129855108 CDS
T11136
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00310
Lysine degradation
sfon00514
Other types of O-glycan biosynthesis
sfon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129855108
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
129855108
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sfon01003
]
129855108
Enzymes [BR:
sfon01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
129855108
Glycosyltransferases [BR:
sfon01003
]
O-Glycan biosynthesis
O-linked Gal type
129855108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
129855108
NCBI-ProteinID:
XP_055778419
LinkDB
All DBs
Position
5:11763944..11791671
Genome browser
AA seq
622 aa
AA seq
DB search
MMLGMMPAFGAVGVGLFCALLVALVPGGMSDIATLVQDPVRPESSLLKPKVMIAILARNA
AHSLPHYLGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEEP
KSYTDEWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFADSDNLLTNPRILNLLMAE
NLTLVAPLLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLR
RDASRELAFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDE
EKESFTHTIAEAMIDHNIAPSEYLYNPQMPQDKMGFDEIFLINLKRRLDRRQRMLSTMTS
LGLQATLTDAVDGKALNTSQLQALGIEMIPGYKDPYSGRVLTRGEIGCFLSHHSTWVQLA
ERGLSKVLVLEDDVRFEPRFKRRMMTIMEEVEKAQLDWDLIYVGRKRMQVRQPERSVEGV
NNLVEADYSYWTLGYALSAQGARKLLAAQAFSKMLPVDEFLPVMFNKHPNSDFMSHFESR
DLKAFSVEPLLLYPTHYTGEPGYVSDTETSTIWDDEATATDWDRQHQHARKTEQQGRIHT
VAQNSVTGDSPPPAARSTRDEL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgggaatgatgcctgcgtttggagccgtgggagtcgggctgttctgcgctcta
cttgtcgccctcgtgcccggtggcatgtcagacatagcgactctggtgcaggacccggtc
cgacccgaatcgtccctgctgaagccaaaagtcatgatcgccattctggctcgcaacgcg
gcgcacagcctgccgcactacctgggctgcatcgacaggctagactacccgaaggagcgg
atcgctatatgggcagcgacagaccacagtgttgacaacagcacagccatgctgagggag
tggctgaaacaggcccaggaccagtaccactatgtggagtggagacccatggaggagccc
aagtcctatactgatgagtgggggcccaagcactggcctccgtcccgcttcaaccatgtg
atgaagctgaggcaggctgctctgaaggcagcacgggaacgctgggcagattatatactg
tttgcagacagtgataacctgctgaccaaccccaggatcctgaacctactcatggctgag
aacctgactctggtggctcccttgctggagtctcgctctctctactccaacttctggtgt
ggcatcactccccagggttactataagcgtactccagactaccagccaatcagggagtgg
aagcgtctgggttgcttcgccgtacccatggtgcactccaccttcctgttagacctgagg
cgtgacgccagtcgggagctggccttctacccccctcaccctgattacagctgggccttc
gatgacatcatggtattctccttctccgcccgacaggcagatgtgcagatgtatgtgtgt
aacagagaacactatggcttcctgccggttcctctgaaggcctcacagaatgttgacgag
gagaaggagagcttcacacacactatcgctgaggccatgattgaccacaacatagcgccc
tcagagtacttgtacaatccccagatgccgcaggacaagatgggttttgatgagatcttc
ctgatcaatctgaaacgtcgtctggacaggagacagagaatgttgagcaccatgacctct
ctgggtctgcaggccacccttactgatgcagtggatggcaaggctctgaacacttctcag
ctgcaggcgttgggtatagagatgattccaggttataaggacccgtactctggccgtgtt
ctaaccagaggagagataggctgcttcctcagccaccactccacctgggtacagttggca
gagcgtggtctttccaaggtgctggtgttggaggatgacgtgagatttgagcccagattt
aagaggcgaatgatgaccatcatggaggaagtagagaaggcccagctggactgggatctc
atctatgtggggcggaagcgtatgcaagtgcgtcagccggagcgttcagtggaaggggtt
aataacctggtggaggcggactactcttattggacgctgggctatgctctgtcagcgcag
ggtgccaggaagctgctggctgctcaggccttcagcaagatgctacctgttgatgagttc
ctccccgtcatgttcaacaaacaccccaattctgacttcatgtctcactttgagtctcgg
gacctgaaggccttctccgtggaacccctcctcctctaccccacccactacacgggcgag
ccaggctacgtcagcgacacagagacctccaccatctgggacgacgaggccaccgccacc
gactgggaccgccagcaccagcacgccaggaagacagaacagcaaggccgcatccacacc
gtggcccagaacagtgtgacgggagactcacctccacccgctgcccgctccacacgagac
gaactatga
DBGET
integrated database retrieval system
