Salvelinus fontinalis (brook trout): 129855118
Help
Entry
129855118 CDS
T11136
Name
(RefSeq) semaphorin-6B-like isoform X1
KO
K06842
semaphorin 6
Organism
sfon Salvelinus fontinalis (brook trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF6203
Motif
Other DBs
NCBI-GeneID:
129855118
NCBI-ProteinID:
XP_055778433
LinkDB
All DBs
Position
5:11988506..12113803
Genome browser
AA seq
916 aa
AA seq
DB search
MGFSFPQNPEAGAYWKGGTFQTDEQPFLSVRPEVKRRSNDILLSLCSTAAMATLAPPFFL
LFWLFQLASAAFPEEPGPLNFIPTEVVRRYPVFLGRPHRSSLRQETLHIQRVLKVNRTLY
IGARDDLFRVELDNVAGEEMFYSKKRTWESNKNDIRTCRMKGKHEDECRNFMKVLLSRQG
GLFVCGTNAFNPLCANYTGDTLEMVGETVSGMARCPYDPKHANVALFAEGNLFTATVTDF
LAIDAVIYRSLGDSPALRTVKHDSKWFREPYFVSSVEWGPHIYFFFREMAVEFNYLEKVR
DKLVQVSRVARVCKADLGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNLLHSTSPVIRM
HGRDIILGVFSTPANSIPGSAVCAFDMEQLAGVFDGRFKEQKSPESIWTPVPDELIPKPR
PGGCAIQGSRFNSSNGFPDEMLNFVKTHPLMDEAVPSLGQSPWIVRTMVRYQLNKMVMDT
EAGPYRNQTVLFLGSSRGTILKFLIVPNWDNTVSSSNVFLEELEGFNPDKCGEDTPQGRH
LLSLTLDRVSRSLLLAFPSCVVRVPVARCQLYSRCMKNCIASRDPYCGWTRGSTCSFLRP
GTRLPFEQDVEHGNVSHLGDCDGLLQESFIDEPDGLVSVNLLVVSAVSAFATGAVLSGLA
VCWIMSHRHRQRTRGAGANNRSRKGDKEQNMLGQGRSGSVMSVTRTSGSERTRSHSQADN
PFVTPNGWPKGEIDPGLPTPEQTPLQQKRPPPSMRLPDGDWDQSQTFLTSVGMPCPANSV
IYLSSKFLQERGGRHEDPGNVGPPNTERTRYLVLANHREPHGGQPRTTLRNSAGEYNYPA
TPQDSPDRRRVVSAPSNQMDFGEPPRWTHEGLNYNSNNGVPYHSQRPGLIRANHHGLADF
NHLMGKSVGEHTHSGQ
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgggattttccttcccgcagaatcctgaagctggagcatactggaaagggggcacattc
caaactgatgaacagccttttctttcagtgagacccgaagtaaaaagacgcagcaatgac
attctactgagtctgtgttctactgctgccatggcgaccctggccccacccttcttcctg
ctgttttggctcttccaattggccagcgctgcatttccggaggaaccggggcctctgaac
tttatacccactgaagtggtacggcggtacccagtgtttctgggtcggccacatcgttca
tccctgagacaggagacactgcatattcagagagttctcaaggtgaaccggaccctctac
attggagccagagatgaccttttccgcgtggagctggacaatgtggcgggagaggagatg
ttctacagtaagaagagaacatgggagtccaacaaaaacgacatcaggacctgcaggatg
aagggcaagcacgaggacgagtgtcggaacttcatgaaggttttgctgagtcgacaagga
ggtctgtttgtctgtgggaccaacgccttcaatccgctgtgtgccaactatactggagac
acactggagatggtgggagagacggtcagtggcatggcccgctgcccctatgaccctaaa
cacgccaacgtggctctgttcgccgaggggaatctgtttacggccactgtgacggacttc
ctggcgatagatgcagtgatctaccgtagcctgggggacagtcctgcactccgcactgtc
aaacatgactccaaatggttcagagagccctactttgtcagttcagtggaatggggtcct
cacatctacttcttcttcagagagatggccgtggagtttaactacctggagaaggtacga
gacaaactggtacaggtgtctcgggtggcgcgggtgtgtaaggcggacctggggggctct
cagagggtgttggagaagcagtggacgtcgttcctgaaggccagactgaactgctctgtc
cctggagactcccacttctacttcaacctgctccattccaccagccctgtcatcaggatg
cacggcagggacatcatcctgggagtcttctccacccccgctaacagtatccctggttca
gcagtgtgtgccttcgacatggagcagctggctggggtgtttgatggaagattcaaggag
caaaagtcacctgagtctatatggacccctgttcctgatgagctcattcccaaaccaagg
ccaggaggctgtgccatccagggctccaggttcaactcatccaatggtttccctgatgag
atgttgaactttgtgaagacccaccccttgatggatgaggctgtgccctcactgggacag
agcccctggattgtcaggaccatggtcaggtaccagctgaataagatggtgatggacaca
gaggctggcccctaccggaaccaaacggtgctcttcctgggctccagccgggggaccatc
ctcaagttcctgatcgtccccaactgggacaacactgtgtccagcagcaatgtcttcctg
gaggagctggagggcttcaaccctgacaagtgtggggaggacactccgcaggggaggcat
ctgttgtccctgactctggaccgggtgagccgctctctgctgctggccttcccctcttgt
gtggtcagggtccctgtggcacgatgccagctctactcacgctgtatgaagaactgcatc
gcctccagggacccctactgtggttggaccaggggaagcacctgctctttcctcaggccc
gggactagactgccgtttgagcaagacgtagaacacggcaacgtgtcacacttgggcgac
tgtgacggtcttcttcaggagtctttcattgacgaaccagacggtctggtatccgtcaac
ctgctggtcgtgtctgcagtctcagccttcgccacgggggcggtgctgtctggcctggct
gtctgctggatcatgagtcatcgccaccgccaacgcacgcgaggggcaggagccaacaat
aggagccgtaaaggggacaaagagcagaacatgctaggtcaggggcggagtggctcggtg
atgagtgtgacccgtaccagtggtagcgagaggacccggtcacattcccaggcagacaac
ccgttcgtaacgcccaacggctggcctaaaggagagatagacccaggcctacctactcca
gaacagacccccctgcagcagaaacggcctccacccagcatgaggctcccagacggagac
tgggaccagagccagaccttcctcacctcagtgggcatgccctgcccagccaactcagtc
atctacctgagctccaagttcctgcaggagagagggggcaggcacgaagacccagggaac
gtggggccccccaacacggagcgaacacgttacctggtcctggccaaccaccgggagccc
cacggaggacaacccaggaccaccctgaggaactctgcaggcgagtacaactatccagcc
acaccgcaggactccccagaccgcaggagggtggtctcagcccccagcaaccagatggac
tttggggagcccccccgctggacccatgaggggcttaactataacagcaacaacggagtg
ccctaccactcccagcgcccgggcctgatccgggccaaccaccacggcctggccgacttc
aatcacctgatgggaaagagtgtgggcgagcatacccatagtggccagtga
DBGET
integrated database retrieval system