Salvelinus fontinalis (brook trout): 129855255
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Entry
129855255 CDS
T11136
Name
(RefSeq) leucine-rich repeat-containing protein 7-like isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129855255
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
129855255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
LRR_LRWD1
PDZ
LRR_5
LRR_At5g56370
LRR_NXF1-5
LRR_EndoS
LRR_Zer-1
PDZ_6
Motif
Other DBs
NCBI-GeneID:
129855255
NCBI-ProteinID:
XP_055778668
LinkDB
All DBs
Position
5:complement(18625608..18848413)
Genome browser
AA seq
1613 aa
AA seq
DB search
MDNYSHLQLQCLEMTTKRKIIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLRELDISKNGIQEF
PDNIKCCKCLSVVEASVNPIAKLPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLSQLERLDLGSNEFTELPEVLEQIHNLKELWMDNNSLQTIPGCIG
KLRHLRYLDLAKNRIESLDTDISGCESLEDLLLSSNMLQHLPDTIGMLKKLTTLKVDDNQ
LTSLPNTIGSGRAKLGLSLLEEFDCSCNELESLPPTIGYLHNLRTFSADENFLVELPREI
GNCKNVTVMSLRSNKLEFLPDEIGQMTKLHVLNLSDNRLKNLPFTFTKLKDLAALWLSDN
QSKALIPLQTEAHPETKQRVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAF
EFEEKEEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQNMVGKNQHPLSTNCSGTNMES
RKQEQYEPPWPMPPKESVLFQVMEREMKEREREFNKTQMTEQGVIHNSAIDIPKRKDKED
LTESSEDSMGGSPNDIRISDMRPTLVEPPMYKPKVVLLGKDKKESIDESDPDKMHCLNNS
GSSATYSDYSPSQGSSGSSNPPGNGATLQAAGKDGGVPQQHWTNRLAQQFPKPIETKPLL
SQRDPRDTPPSSTLQQRSERRPLSDTFDQWNDSSHYDNTGFVSEEAPLETPSGSSSGNPM
LGSKSCSASTSHGGRRPLMRQERIVGIPLELQDAPHQHPSHQFHNVRNTPETEVSQPPPP
NPWQNWTRTPSPFEDRTAFPSKLSSPGNSPNPDRNDFEQEMHHGELPGTFPSTGTWGYLD
SRNSGQGRSSQQANMYQHVQSKPTRPSSGAMVMSKSSERLSPMMKEVKAKFKKSQSIDEI
DMGSYNVYSIPVDTYSSSIENQGSVDRPDMPGPMEQSMSRSQSAPMLDDDDAYGTNSQQQ
KPSIPKKVYHFDQSFNPQGAMDMRNQQQERRAPPPFPNTPEYVNHPGKTLPKELVSPRGY
RGYPPMDQMFSYSQPSVNEENQPSQQQQPFPIPSQRSRPGFLRRADSLVSSTELALFRRV
QEAQEMQQKSDHYGRQHFKGMLEHQNSLASMAQQDQQYNKRNGRYEEDYSSYQEPKKPIM
GYPTKSLTQRRPLSARSYSTETFGASQARPVSARPTMAALLEKMPPDYNLRTCTENIKSP
DEMKMRTMQLQHKPDDMSSKMPVDWRQQLLRHIEAKRLDRSAVLKHNTVNFGMLCSGGYA
APHASRSMTINFYNNMNKHENQTTQWLPLPNTPSQQSNILDNGQEVVSPTTQWAPYSLGR
RDVPPENIMKKLPDSLPNGLNYPQAGGHHPHQSQTMIVTSTSATPPHRSVRDQQYEGAIN
KISIQQYQSPLPLATTTRPQSARCLIQTKGQKSMDDFQEQFCVRIEKNPGLGFSISGGIS
GQGNPFKPSDMGIFVTRVQPDGPASNLLQPGDKILKRPGLWCEVTDVSRVPREHCSQLVL
AMGSLSTALGSLSTALNRSSGTHTACLSLGSGSHTQNNSLLTTLHYITTLLKV
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggacaattactcacatctacaactgcagtgtctggagatgacgactaagaggaagatc
attgggcgcctggtgccgtgccggtgcttccggggtgaggaagaggtcatctcagtgctg
gactactcccactgcagtctgcagcaggtgcccaaggagatcttcagcttcgagcgcacg
ctggaggagctctacctggatgccaaccagatcgaggagctgcccaagcaactatttaac
tgtcaggctctccgtaaactgagcatacctgacaatgacctgtcaaacctgccaaccacc
atagccagccttgtaaacctgagggagttggacatcagtaaaaacggtattcaagagttc
ccagacaacattaaatgctgtaaatgcctatctgttgtggaggccagtgtaaatcctatt
gccaagctcccagagggcttcacccagctcctcaacctgacacagctcttcttaaacgat
gcctttctggaatacctccccgccaactttgggagactttccaagttacggatcctggaa
ctgcgagagaaccacctgaaaacgatgccaaagtcaatacacagactgtcacagctggag
cgattagacttgggaagcaatgaattcactgaactgcctgaagtcctggagcagatccat
aacctaaaggagctgtggatggacaacaactcactgcagacaatacctgggtgtataggg
aagctgaggcatctgcgctacctggacctggctaaaaacaggattgaaagcctggacact
gacatctctggctgtgagtccctggaggacctcctgctctcctccaacatgctgcagcat
ctgcctgacaccataggaatgttgaaaaaactcacaacattaaaagtggatgacaaccag
ctcacctcactgcctaacaccattggaagtggacgcgccaaattaggtttatcgctttta
gaggagtttgactgcagctgtaatgaattggagtccctgcccccaaccattggctacctg
cataacctccgcacgttttctgctgatgagaacttccttgttgaactacccagggagatt
gggaactgtaagaatgtgacagtcatgtcgttgcgctccaataagctggagtttctacct
gacgagattgggcagatgaccaagctacatgttctcaatttaagcgacaatagattaaaa
aaccttccgttcactttcacaaaactaaaagatctagctgctctttggttatcagacaat
cagtccaaggccctgatccctctccagaccgaggctcatccagagaccaagcagagggtc
ctcaccaactacatgttccctcagcaaccacgacatgatgaggactaccagtcagacagt
gacagtttcaaccccaccttatgggaggagcagcgtcagcagaggatgactgtggccttt
gagttcgaggagaaggaggaagaggacaactctggaaaagtcaaggttgagatcaatctg
aagcgctaccctacaccgtacccagaggatctgaagaacatggtgaagtcagtgcagaac
atggtgggcaagaaccagcatcccctcagcactaactgctctggtaccaatatggagtca
cgaaaacaagaacagtatgagcccccctggcccatgccccccaaagagagtgtcctgttc
caggtgatggagagagagatgaaagagagagaaagagagttcaacaagactcagatgaca
gagcagggcgtaatccacaactctgccatcgacatcccaaagcgcaaggacaaggaggat
ctgactgagagctcagaggattctatgggcggctctccgaatgacatccgtatctctgat
atgaggcccaccctggtggaaccgcccatgtacaaaccaaaagttgtattactggggaaa
gacaagaaagaatctatagatgagtcagacccagacaagatgcattgcctgaacaacagt
ggctcgtcggccacctactcagactactctccgtcccagggttcttctggctcctccaac
cccccggggaacggggccaccctgcaggctgctgggaaggatggaggagtgcctcaacaa
cactggaccaacaggctggcccagcagttccccaagccgatcgagaccaagcctctactg
agtcagagagaccccagagatacccctccctccagcacactgcagcagcgcagcgagcgg
cgccccctcagcgacacctttgaccagtggaacgactcctcccactatgacaacacaggc
ttcgtgtctgaagaggctcctctggagactcccagtggtagcagcagtggtaaccccatg
ctgggctccaagtcctgcagcgcctccacctcccatgggggccgccggcccctcatgagg
caggagcgcatcgtgggcatccccctggagctgcaggatgcccctcaccaacacccctcc
caccaattccataatgtccgcaacacgcccgaaactgaagtatctcagcctccccctccc
aacccgtggcagaactggacaaggacgcccagtcccttcgaggaccgcacggctttcccc
tccaaactgagctccccaggcaacagccccaatcctgaccgcaacgactttgagcaggaa
atgcatcatggagagctgccgggcacgttcccctccacaggaacgtggggttacctagac
tccaggaactctgggcaggggcgcagcagccagcaggccaacatgtaccaacatgtccaa
tcgaagcccactagaccaagctctggggccatggtgatgagcaagagctctgagcgcctc
tctcccatgatgaaggaggtgaaggctaagttcaagaagtcccagagcatcgatgagata
gacatgggctcctacaatgtgtacagtattcctgtggacacctacagctccagcatagag
aatcaggggagtgttgaccgtccagacatgccgggccccatggagcagagcatgtcccgg
agccagtctgcccccatgctggacgatgatgatgcctacggaactaatagccagcagcag
aagccttccatccccaagaaggtctaccacttcgaccagagcttcaaccctcagggggct
atggatatgaggaatcagcagcaggagaggagggcccctccacccttccccaacacccct
gagtacgtcaaccatccggggaagaccctgcccaaggagctggtgagccccaggggctac
cggggttaccctcccatggaccagatgttctcctactctcagccctcagtcaacgaggag
aaccagccgtcccagcagcagcaacccttccccatccccagtcagcgctcccggcctggg
ttcctgaggcgggccgactccctggtcagctccacagagctggccctgttccgcagggtt
caggaggcccaggagatgcagcagaagtcggaccactatggccggcagcacttcaaaggc
atgctggagcaccagaacagtctggctagcatggcccagcaggaccaacagtacaacaag
aggaatggcaggtacgaggaagactactcctcctaccaggagcctaagaagcccatcatg
ggctaccccactaagagcctgacacagcgacggcctctgtcggccaggagttacagcacg
gagacgttcggggcgtcccaggccaggcctgtgtctgccagacccaccatggctgccttg
ttggagaagatgcccccagattataatctgaggacgtgcactgagaatataaagagccct
gatgagatgaaaatgcgcaccatgcagctgcagcataagcctgatgatatgtcctctaag
atgccagtagactggaggcaacagctgcttagacatatagaggccaaacgattagaccgg
agcgctgtccttaagcacaacacagtaaacttcggcatgctgtgctctggaggctatgct
gcaccgcatgccagcagaagcatgacaataaacttttacaataacatgaataagcatgaa
aaccaaacaacacagtggctacctctacccaataccccctctcaacagagcaatatatta
gacaacggccaggaggtggtttctcccactactcagtgggccccctactcactgggcagg
agagacgtgcccccagaaaatatcatgaaaaagcttcctgactctttgcctaacgggtta
aattacccacaggcaggcggccaccacccccaccaatcacagaccatgatcgtgacatcc
acgtcggccacacccccacaccgctcagtgcgggaccagcagtatgagggtgccatcaac
aagatctccatacagcagtaccagtctcctctgcccttggccaccaccacccggccccag
agcgcacgctgcctcatccagaccaaaggccagaagagcatggacgacttccaggagcag
ttctgtgtgcggatagagaagaatccaggtttagggttcagcatctcagggggaatcagt
ggtcaagggaaccccttcaagccttctgacatgggtatctttgttactagggtacagcct
gatggaccggcctccaacctgctacagcctggggacaaaatactgaagaggcccggactg
tggtgtgaagtcactgatgtaagcagagtacctagggagcattgcagccagctggttctt
gcaatgggctcactgtccacagcattgggctcactgtccacagcattaaacaggtcatca
ggaacacacaccgcctgcttgtcactgggatcagggtcacacacacaaaacaacagttta
ctgacaacactacattacatcacaacactgctcaaagtgtga
DBGET
integrated database retrieval system
