Salvelinus fontinalis (brook trout): 129855285
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Entry
129855285 CDS
T11136
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129855285
04020 Calcium signaling pathway
129855285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129855285
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129855285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
129855285
NCBI-ProteinID:
XP_055778752
LinkDB
All DBs
Position
5:complement(20202914..20376608)
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AA seq
2484 aa
AA seq
DB search
MLELGSCSVSAQTLADHNALEVPQLARVGVSGSSTPHRYVLHPESENWHKDRLGLATGSH
SCSLMEPQSLSDSLLSHTAIIDTLYLPHNAHAPRGLSLDVDISYNGVEGVLGMDPDRPVS
PIVIKRRRGGLIEQRDIVKAHQAHKIQSTPQALRKEWEMSRFGDNVPALLGSGNGGSERN
RTREGAPVSTGGGVSPAFKQTKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIVRKY
AKKVIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLEKTEPYFIGMFCFEAGI
KVVALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLV
SGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHNTCLPMPNILENE
TVDKSESEFPCGVRKCPDKYTCHDTWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLY
NTNDALGPTWNCMYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQI
ERELNGYRAWINKAEEVMLAEDNKNSGPSALDVLKRATIKRRGLDQQYGDIASVGIPMTR
ASIRSAKRGPTAYLKRKERLLRISIRRMVKTHIFYWTVLGLVALNTLCVAIVHHNQPHWL
SVFLYYAEFLFLGLFLTEMCLKMYSLGPRLYFHSAFNRFDCGVIVGSIFEVMWGFFRPGM
SFGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLIFLLFLFILVFALLGMQL
FGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIV
LTLFGNYTLLNVFLAIAVDNLANAQELTKEEEDEEAAFNQKHALQKAKEVGAMSSLMSSD
RRRRPYLYRKRAIHRSRPAYSLEEAESLAEGPPCPPLNSSNSFMSRRERSRRMTMSVWEQ
RTSQLRRHRQMSNREILFSNPSEEQEAPPGCPHHLKATGTPTGSLKLADPTADPKAFTAK
PPNPMEMPQEEPALSMGVPELHLSSPLPEPPDPTDTPLPDPPTSTAVFIPEPTESEPCPE
GKCGIPNHCHQGLNGRRSPWLNGERRQRAVRKFRPPAGDTLTTDMEGMRLRRPQGTGHCE
AQAGARGLDSPQAEGSSRSVSMERKTPEDPVEEVRKDGNEGETRQPSETREAEHRQREHD
QTGGPELQNREEGLLSDPPTLQPSQAAVLALPEGPTGDSETDSNATTLNQSPLSSSVVIE
VTDVQLSLELTPITGNSKDVEASKPEKDEEEVASPVNTVTPDSMFIFKPDNLIRRACHYV
VNLRYFEMCILLVIAASSIALAAEDPVSATSDWNKVLRYFDYVFTGVFTFEMIIKMIDQG
LILHDGSYFRDLWNILDFIVVVGALVAFALTNVLGNNKGRDIKTIKSLRVLRVLRPLKTI
KRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDGSKDTEKDC
QGFYINYEKDKQDVKRREWRRHDFHYDNIVWALLTLFTVSTGEGWPQVLQHSVDVTEEDR
GPSQGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDF
AISAKPLTRYMPQNRQTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPVYEAM
LKHLNTAFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQSIETFNM
GFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNI
RLDEETHINQHNNFKTFFGALMLLFRSATGESWQEIMLSCLGGQKCEPDPLALTSDHEER
CGTEFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDR
AACGRIHYKEMYTVVRTISPPLGFGKNCPYNVACKRLVLMNMPVDEEMSVHFTSTLMALI
RTALEVKIARGGEDRGQMDSDLQKEIGIIWPHLSQKTLDLLVPIHKANHMTIGKIYAAMM
IMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQDILCSAKALPFLTHSAGSALTRGG
FVALSPISPQEMFMQPMSQDLEDKEEDYHHYHYHHHQLHTLVPERKEFNRILCPTNRQDA
PLKVPGWAGSIRASSMPQLAVDTQVGTDSSKLMKRSFSTIGDQCVNGLWQEEYSLERFSS
DRLYRPRQRSIRGIRSNLREPVDQERGRSKERRHLLSPDVSRCNSEERGQDPSQERKQSR
SPSEGHAHVHHRQGNTSGSPGPSNSESSTPSGRRQLPQTPSRPRPHISYSPLICRAPPSP
PVVSEGRARIQEAPGETEEPLWREEGEKPAQVAGAGSGVGVVVGVSDPGLGVSHLHPSPH
RYISEPYLPLHEEFHSPDSSGLEETLTFEVAIATSLGRANTISSAPQLRHNWQVPNGQFH
KRLGQASSLAACELLCDTDEDDRC
NT seq
7455 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattgggctcctgttcagtcagcgctcagaccctggcggaccacaatgctctt
gaggtgccccagctggccagggtgggggtgtcagggagcagcaccccacaccgctacgtt
ctccaccccgagtcagagaactggcacaaggaccgtcttggcctggccaccggctcccac
tcctgctccctaatggaaccccagagcctgtcagacagcctgctctcccacacagccatc
atcgacactctctacctcccccacaatgcccatgccccccgtggcctctccctggatgtg
gacatctcctacaacggggtcgagggagtgctggggatggaccccgaccggcccgtcagt
cccatcgtcattaagcgccgccgggggggcctcatcgagcagcgggacatcgttaaggcc
caccaggctcacaagatccagagcaccccacaagccctgcgcaaggaatgggaaatgtcc
cggttcggagacaacgttcccgccttgttgggctccgggaatgggggctccgagcgcaac
aggacccgggagggagcgcctgtgtctacaggtggtggagtttccccagcctttaaacag
accaaagcgcagagagctcgcaccatggccctgtacaaccccatccctgtcagacagaac
tgtttcaccgtcaatagatcactcttcattttcggggaggacaacattgttcggaagtac
gcaaagaaggtcatagagtggcctccgtttgagtacatgatcctcgccaccatcatcgcc
aactgtatcgtcctagccctggagcagcacctgcctggagaggacaagacccccatgtct
aagagactggaaaagacagagccttacttcattgggatgttctgctttgaagctgggatt
aaagtggtggcattgggatttgtattccataaaggctcctacctgagaaacggctggaac
gtcatggatttcattgtggttctgagtgggattctggccacagcgggagctcacatgaac
atcccagtggacctgcggaccctgagggccgtccgtgtgctcagacccctcaaactggtc
tctggaatccccagcctgcagatagtcctgaaatccatcatgaaagccatggtgccgctg
ctccagattggcctgttgctcttcttcgccattctcatgtttgccatcatcggcctggag
ttctacagcgggaagctccacaacacctgtctgcccatgcccaatatcctagagaatgag
acggtggacaagtctgagtcagagttcccgtgtggggtaaggaagtgccctgacaagtac
acctgccatgacacctggatcggccccaacgacggcatcacccagtttgacaacatcctg
tttgctgtgctcactgtcttccagtgcatcaccatggaaggctggaccaccgtgctctac
aacaccaacgatgctttaggccccacgtggaactgcatgtacttcatccctctgataatc
attggctccttcttcgtgttgaacctggtattgggagtgctctcaggagagtttgccaaa
gagagggagcgggttgagaaccgcagggcgttcatgaagttgcggaggcaacagcagatt
gagagggaactcaatggctaccgggcctggatcaacaaagcagaggaggtgatgcttgca
gaggataataagaattcaggaccgtctgctcttgatgtgctgaagagggccacaatcaag
aggagaggactggaccagcagtatggtgacatcgcttctgtgggcatcccgatgaccaga
gccagcatcaggagtgctaagagaggacccacggcttatttgaagcgtaaggagcgtctg
ctgcggatctctatccgccgcatggtgaagacacacatcttctactggaccgtactgggc
ctggtggccctcaacacactctgtgttgccatcgtccatcacaaccaaccccactggctg
tctgtgttcctctactatgcagagttcctctttctgggtctgtttctcactgaaatgtgt
ttaaagatgtacagcctgggacccagactctacttccactccgccttcaatcgcttcgac
tgcggggtgatagtgggaagcatatttgaggtgatgtggggattcttcaggcctggcatg
tcctttggcatcagtgtgctgcgtgcgctccgtctgctgaggatattcaagatcaccaaa
tactgggcgtcgctgaggaacctggtggtatccctgatgaattctatgaaatcaatcatc
agcctcattttcctcctcttcctctttatcctggtctttgctctgctgggcatgcagctc
tttggtggcaggttcatctttgaagactacactcctacaaactttgatacttttcctgca
gccatcatgactgtatttcagatcctgacaggagaagactggaatgaggtgatgtacaat
gggatccgctcccagggaggagtgaagtcaggaatgtggtcctccatatacttcattgta
ctcacactctttggcaactacacgctgttgaatgttttcttggccatcgctgtggacaat
ctggctaatgcccaggaactaaccaaggaagaagaggacgaagaggctgctttcaatcag
aaacatgctctccagaaagcaaaggaagtaggggccatgtcttccttgatgtcatcagac
aggaggaggagaccctacctgtataggaaaagagcgatacacaggagccggcctgcctac
tctctggaggaggctgagagcctcgccgaggggcccccatgcccgccactgaattcctct
aactctttcatgtccaggagggagaggagtagacggatgaccatgtctgtgtgggagcag
agaaccagccaactgcgcaggcaccggcagatgtccaaccgagagatcctcttcagcaac
cccagtgaggagcaggaagcgccccctggctgtccacaccacctcaaagcaacaggcaca
cccacaggcagcctgaagctggctgatcccacagctgaccctaaggccttcacagctaag
cccccaaatcccatggagatgccccaagaggaaccagccctgtccatgggtgtccctgag
ctccacttatccagccctttaccagagccacccgatcccactgacacgcccctgcctgac
ccccccacgtccacagctgtgttcataccggagcctacagaatctgagccatgcccagag
ggcaagtgtggcatccccaaccactgccaccaaggcctcaatggccgcaggagcccctgg
ttgaatggggagagaaggcagagagcggtgcgtaagttccgccctcctgctggtgacacc
ctgaccactgacatggaaggcatgaggctcaggaggccacagggcacagggcactgtgag
gcccaggctggggccagaggcctggactcacctcaggcggagggcagcagtcgctctgtc
agcatggagaggaagaccccagaggacccagtggaggaggtgaggaaagacggtaacgag
ggagaaaccaggcagccttctgagaccagggaggctgaacacagacagagggaacatgat
cagactgggggtcctgagctgcagaacagggaggagggtctactgtcagatccacccacc
ctgcagccatctcaggctgcagtactggcgctaccagagggccccacaggagacagtgag
accgatagcaacgccaccactctgaaccagtcccctctgagctccagtgttgtcatcgag
gtgaccgatgtccagttgtcactagagctcacccccatcacaggcaacagtaaagacgtg
gaggcatccaagcctgagaaggacgaggaagaggtggccagcccagtcaatactgtcaca
cctgacagtatgttcatcttcaaacctgacaacctgatccgccgggcctgtcactatgtt
gtgaacctgcgttactttgagatgtgcatcctgctggtgatcgctgccagcagtatcgcc
ctcgctgcagaggaccccgtttcagccacctccgactggaacaaagttttgcgttacttt
gactacgtgttcacaggtgtctttacctttgaaatgataataaagatgatagaccagggc
ttgattctccatgacggctcctatttccgggacctgtggaacattctagactttatcgtg
gtggtcggagctctggtggccttcgccctcacgaatgtgctgggaaataataaaggacgg
gacatcaaaaccatcaagtctcttcgggtgctgcgcgtactgaggcccctgaagaccatc
aagagactaccgaaactcaaggcagtgtttgactgtgtggtgacctctctgaagaacgtc
ttcaacatcctcatcgtctacaagctcttcatgttcattttcgctgtcattgctgtgcag
ctgttcaaggggaagttcttctactgcactgacggatccaaagacacagagaaggactgc
cagggcttctacatcaactatgagaaagacaagcaggacgtgaagaggagggagtggagg
agacatgactttcactatgacaatatagtctgggccctactcactctgttcaccgtctct
actggggaaggctggccacaggtcctgcagcactctgtggacgtgacagaggaggacaga
ggacccagccagggcaacaggatggagatgtccatcttctatgtcatctactttgtggtc
ttccccttcttctttgtcaacatatttgtggctctcatcatcatcaccttccaggagcag
ggagacaagatgatggaggagtgcagcttggagaagaatgagagggcttgcattgacttt
gccataagtgccaaacccctgacccgctacatgcctcagaacagacagacgttccagtac
cgcctctggcactttgtggtctccccctcctttgagtacactgtgctggccatgattgca
ctcaacaccattgtcctgatgatgaagtattactcagccccaccagtgtacgaggctatg
ctgaaacacctgaacacagccttcactgtgctcttctctgtggagtgtgtcctcaagatc
atggcctttggctttctgaactactttcgagacacttggaatatatttgacttcatcacg
gttttgggcagcatcacagaaatagtggtggacctgcagtcaattgagaccttcaacatg
ggtttcctgaagctgttccgagctgctcgactgatcaagctgttgaggcagggttacacc
atccgcatcctgctctggacctttgtccagtcctttaaggctctcccctacgtctgtctg
ctcattgccatgctcttcttcatctatgcaatcatcggaatgcaggtttttggaaacatc
agactggatgaggagactcacatcaaccaacacaacaacttcaagaccttctttggtgct
ctgatgttgctattcaggagtgccacaggggagtcgtggcaggagatcatgctgtcatgt
ttgggggggcagaagtgtgagccagaccccttagctctaacatcagaccacgaggagcgc
tgtggaactgagtttgcctacttctactttgtttccttcatcttcttcagctcatttctg
atgctgaatctgtttgtggctgtgatcatggacaactttgagtacctcacccgagattct
tccatcttggggcctcatcatctggatgagtttgttcgtatctggggtgaatacgaccga
gctgcttgtggaaggattcactataaggagatgtacacagtagtacgcactatttcccct
cccctgggctttggaaagaactgcccctacaacgtggcctgcaagaggctggtgctgatg
aacatgcccgtggatgaggagatgtctgttcacttcacctccaccctcatggccctgatc
cgaactgccctggaggtcaagatagccagaggaggggaggacagggggcagatggattca
gacctacagaaggagatcggtatcatctggccacacctttctcagaagaccctagacctg
ctcgtccccatccacaaagcaaatcatatgaccattgggaagatctacgcagctatgatg
atcatggactactacaagcagagcaaagccaagaagctcaggcaacagctggaggagcag
aaacacgctcccatgttccagcgtatggacgcgtcctctctgcctcaggacatcctctgc
agtgccaaagccctcccctttctgacccacagcgctggatctgccctgaccagaggaggg
tttgtggccttgagtcccatctccccccaggagatgttcatgcaacccatgtcccaggac
cttgaggataaagaggaggactaccaccactatcactaccaccaccaccagctccacact
ctggttccggagcgcaaagagtttaaccgcatcctttgccctactaacaggcaggatgcc
ccactcaaggtgcccgggtgggcaggctctatccgagcctcgtctatgcctcagctggct
gtagacacacaggttgggacagacagcagcaaattgatgaaacgctccttctccactatt
ggtgatcagtgcgtaaatgggctgtggcaggaggagtactctctggagaggttcagttct
gaccgtctgtatagaccacgacagaggagcatcagaggcatcaggtccaacctcagggaa
ccagtggatcaagagcgggggcgctccaaagagcggcgccacctgctgtctcccgacgtg
tcccgctgcaactctgaggagcggggccaggacccgtcacaggaacgcaagcagtcccgc
tcccccagcgagggacacgcacatgtccaccatagacagggcaacacttcaggcagccca
ggcccgtctaactctgagtccagcacccccagtggccgtcggcagctcccccagacgcca
tcgcggccacgccctcacatctcctactcccccctgatatgccgagcccccccctccccc
cctgttgtcagcgagggcagagcccggatccaggaggcccctggagagacggaggagccc
ttgtggagggaggaaggggagaagccagcccaggtggcaggagcaggatcgggggtgggg
gtggtagtaggggtgagtgacccaggcttaggggtcagtcacctacatccctcccctcac
cggtacatctcggagccatacctgcccctgcacgaggagttccacagcccagactcctca
ggcctggaggagactctgaccttcgaggtggccattgcaactagtctgggtcgggccaac
accatcagctctgccccccagctcagacacaactggcaggtccccaacggacaattccat
aaacgcctgggtcaggccagctctctggccgcctgcgagctcctgtgtgacaccgatgag
gatgaccgctgttag
DBGET
integrated database retrieval system
