Salvelinus fontinalis (brook trout): 129855543
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Entry
129855543 CDS
T11136
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129855543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129855543
Spliceosome [BR:
sfon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129855543
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Wap1
Motif
Other DBs
NCBI-GeneID:
129855543
NCBI-ProteinID:
XP_055779293
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All DBs
Position
5:37170434..37174203
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AA seq
308 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMALKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELQHVDEFIDELLHSERMCDIILPRLQKRQVLEEAELLDTR
ISALEEDLDEVETSDEEDEEEEKTERVQTPEPHRRSYRDNDRPRRSPSPRYRRSSRSPRR
RSRSPKRRSPSPRRERHRSKSPRRHRSRERRHRSKSPGHHRSHRHRSHSKSPERSSKKSH
KKSRRGNV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataggactgttaaagatgccaacagtatacatggaacaaatccacaatatttg
gtggagaaaattattcgtactcgaatctatgaatcaaaatactggaaagaagaatgcttt
ggactgacggctgagcttgtcgttgacaaagccatggcgctgaagtttgtcggtggcgtt
tatggcggaaatatcaaacctacaccgttcctgtgtctcactctgaagatgctgcagatc
cagccagagaaagacatcattgtagaattcatcaaaaacgaggatttcaaatatgtccgc
ttgcttggcgccatgtacatgaggttgactgggacttcagtggattgctataaatacctg
gaaccgctgtacaacgactacagaaaaatcaagagtcagaaccgaaatggggagtttgag
ctgcaacacgttgatgagtttattgatgaactgctacactccgagagaatgtgtgacatc
atccttcccaggcttcagaaaaggcaggttcttgaggaggcggagctgttagacacacgc
atcagtgccctggaagaagacctggatgaggtggagaccagcgacgaggaagatgaggaa
gaggagaagacagagagagttcagaccccagagccccacaggcggagttaccgagacaac
gatcggcctcgccgctcgccctctccacgctacagacgcagcagtcgttcacccagacgg
aggagcagatcacctaagagacgaagcccatcccccagacgagaacgtcaccgcagcaaa
agcccccgtcgccaccgctcccgagagagacgtcaccgctcaaagtccccagggcatcac
agaagccacaggcatcgcagtcactccaaatccccagagaggagttcaaaaaagagccac
aagaagagtcgaagaggaaacgtgtga
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