Salvelinus fontinalis (brook trout): 129855553
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Entry
129855553 CDS
T11136
Name
(RefSeq) paired mesoderm homeobox protein 1-like isoform X1
KO
K09329
paired mesoderm homeobox protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129855553
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
129855553
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
129855553
NCBI-ProteinID:
XP_055779311
LinkDB
All DBs
Position
5:complement(38364096..38373048)
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AA seq
245 aa
AA seq
DB search
MTSSYAHGMDRQATISNRLESSITSNLENLQAKKNFSVSHLLDLEEAGERVGTQADESVG
EAGRNMLESPGLTSGSDTTQQENEQLNAEEKKKRKQRRNRTTFNSSQLQALERVFERTHY
PDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAIEQP
IVPRPAPRPNDYLSWGSASPYSTMATYPPTCSNPNTSQGMNMANSIANLRLKAKEYSLNQ
VPTVN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagctatgcacatggaatggacaggcaagcaacgatatcaaatcgtttggag
agttcgattacatccaatctggaaaaccttcaagccaaaaagaacttctccgtgagccac
ctgttggacctggaggaggccggagaaagggttgggacccaggcggacgagagtgtcggt
gaggcggggaggaatatgctggagtcccctggtctgaccagtgggagcgacactactcag
caggagaatgagcagctgaacgcggaggagaagaaaaagaggaaacagagaaggaacaga
actacattcaacagcagccagctgcaggctctggagagggtgttcgagaggacacactac
cccgacgccttcgtcagagaggacctggcacgcagggtcaacctcacagaggcacgggtg
caggtgtggtttcagaatagaagggcaaagttccgtcggaatgagcgcgccatgttggcc
agcaagaacgcctcgctcctcaagtcctactccggggacgtcacggccatagagcagccc
atcgtaccccgccctgccccccgcccaaacgattacctgtcatggggtagtgcctctcct
tacagtaccatggcaacctacccccccacatgttccaaccccaatacatcccagggaatg
aacatggctaacagcatcgccaacctgcggctcaaagccaaggagtacagcttgaaccag
gtgcccacggttaactga
DBGET
integrated database retrieval system
