Salvelinus fontinalis (brook trout): 129855594
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Entry
129855594 CDS
T11136
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1 isoform X1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04081
Hormone signaling
sfon04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129855594 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
129855594 (smad1)
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Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
129855594
NCBI-ProteinID:
XP_055779401
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Position
5:complement(41375639..41387301)
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AA seq
481 aa
AA seq
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MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEYPFGSKQKDV
CINPYHYKRVDSPVLPPVLVPRNSEFNAKHSMLPRFRNPLHQNEPHMPQNATFPESFSQA
NTLMNFPQTQTHSPGGNSYPGSPGSGSSATFPHSPTSSDPGSPFQMPGEPPGQMPETPPP
AYLPPEERMTQDCPQPMDTNLMVPALPLEISNRPDVQPVAYEEPKHWCSIVYYELNNRVG
EAFQANSTSVLVDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVY
AECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVY
ELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSV
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacctccctgttctccttcaccagcccggccgtcaagcgcctcctcggctgg
aaacaaggagacgaagaggaaaaatgggcggagaaagccgtggacgcgctggtgaagaaa
ctgaagaagaagaagggagcaatggaggagttggagagggctctgagctgcccgggtcag
cccagtaactgtgtcaccatccctcgctccctggatggaagactccaggtgtcccacagg
aaaggcttaccccatgttatctactgtagggtgtggaggtggcctgacctgcagtctcat
catgagctcaaggctctggagtgctgtgagtacccgtttggctccaagcagaaggatgtc
tgcatcaacccgtaccactacaagagagtggatagtccagtgctgcccccagtgttggtc
ccgcggaatagcgagttcaatgccaaacacagcatgctaccacgcttccgcaaccctctg
caccagaacgagccccacatgccccagaacgccaccttcccagagtccttctcccaggcg
aacaccctgatgaacttcccccagacacagacacactcccctgggggtaacagctacccc
ggctcccctggtagtggcagcagtgcaaccttcccccactcccccaccagctctgaccca
ggcagcccatttcagatgccaggtgagccgccaggtcagatgccagagacccctcctcca
gcctacttgcccccagaggagcggatgactcaggactgcccccagcccatggacaccaac
ctgatggtccccgcgttacccctggagatcagcaacaggccagatgttcaaccggtggcc
tacgaggaacctaaacactggtgctctatagtgtactacgagttgaacaaccgggtgggc
gaggcgttccaggccaactctactagcgtcctggtcgacggcttcaccgacccgtccaac
aaccgcaaccgtttctgcctgggcctcctctccaacgtcaaccgcaactcaaccatagag
aacacccggcgacacattggcaaaggagtccacctgtactatgtgggtggtgaagtgtat
gctgaatgtctgagtgacagcagcatcttcgtccagagtcggaactgtaactaccaccat
ggcttccaccccaccactgtctgtaagatccccagcggctgcagcctcaagatctttaac
aaccaggagtttgctgagctgctggcccagtccgtcaaccacgggtttgaggctgtctac
gagctgaccaagatgtgcaccatccgcatgagcttcgtcaagggctggggtgcagagtac
caccgccaggacgtgaccagcaccccctgctggattgagattcacctgcacggtcctctg
cagtggctggacaaggtgctaacccagatgggttccccccacaaccccatctcctccgtg
tcctag
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