Salvelinus fontinalis (brook trout): 129855597
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Entry
129855597 CDS
T11136
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129855597 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129855597 (herc3)
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129855597 (herc3)
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
HECT type E3
129855597 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
129855597
NCBI-ProteinID:
XP_055779406
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All DBs
Position
5:complement(41602645..41635928)
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AA seq
1050 aa
AA seq
DB search
MMLCWGSTVEGQLGIGGARDPVCEPRSCQAFNGRGLKEVACGGRHSLFLLRDGRVYTCGS
NRCGQLGHDKPGDSPELVVALNTQKIGVVSCGQAHSMALNEQGQVFAWGAGGGGQLGLGT
AEETVPIPRLIKKLCEHRISQIMCGNKHCIALSKDGQLFTWGQNSSGQLGLGKGEPSTLS
PQPLKSLSGIPLAQITAGGDHSFALSLSGAVFGWGKNSAGQLGLNDKQDRSVPCHIKFLR
SQKVVYISCGDEHTAALTKDGGLFTFGDGSRGQLGHDSTNNEPLPRQVQELMGSEVSQIA
CGRHHTLAFVPSSGLVYAFGCNTNGQLGTGTRGDINSPLPVKSSLTGRLTGSPRHMSGPD
HYAITKINCGGDHNFLLYSDEKSSTAPEDFRVTNISRSISLINDASLNTWRMKLLDNTDS
TITNDVILLLSSTACWNASFLDESDDSHFKTNPKVPGIDLNSVRLLFETLSKPPFARLLE
QATKSFESLLIPQLPCSPPDVEAMRIYLILSECPALHDSKNYITLTIPLAMAILRLDANP
SKVLDNWWCLVDGGVFSRLVDMYKSIVVFLLTGGKALLVPVFLENYTSATLKLLEKLHKV
NLKAGHVEYNRFYIPDITTLVDIQEDYLKWFLSKAEIKMRTPAVQSSVTLCAYPFILNAQ
AKTTMLQTDAELQMQMAVSGANMHNVFMLLTLEPLLARNPFLVLHVRRDHLVSDALRELT
IYSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTQYTQSNLLWFSDK
CFVEHNWFNLIGIICGLAIYNSTVVDLHFPLVLYKKLLGVAPTLEDLKELSPTEGRSLQQ
LLDHEEDDVEETFCLNFAITREYYGLTEVKELIPGGDRITVDKNNREEFVEAYLKYMFRD
SVSELYQAFSSGFLKVCGGKILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYSATHP
TVRMFWEVFHEFPLEKKKRFLLFLTGSDRIPIHGMESLRIAIQSTSAEEHYLPVAHTCYN
LLDMPRYQTKETLHHRLTQAVEQYEGFSLV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgttggggcagtactgtggagggccagctgggtatcggcggagcgagggac
cccgtgtgcgaaccccggagctgccaggcgttcaatgggcgtggcctgaaggaggtggcg
tgcggcgggcgccattcgctattcctgttgcgtgatgggagagtgtacacgtgcggctct
aaccgctgtgggcagctgggccacgacaagccgggggactcgccagaactggtggtggcc
ctgaacacccagaagataggggtggtatcgtgcggccaggcccactccatggcgctgaat
gagcagggccaggtgtttgcctggggggccggtggagggggccagctgggtctggggacc
gctgaggagaccgtcccaatccccaggttgatcaagaagctgtgcgagcatcgcatctct
caaataatgtgtggcaacaagcactgcatcgcactctctaaagacggtcagctgttcacg
tggggccagaactcgagcggtcagctgggtttggggaagggagagcccagcaccttgtct
ccccagcccctcaagtctctgtcaggtatccccctggctcagatcactgctgggggagac
cacagcttcgccctgtccctctctggagctgtgttcggctggggcaagaacagcgccggg
cagctggggctaaatgacaaacaggaccggtctgtcccttgccacatcaagttcctcaga
tcccaaaaagtggtttatatcagctgtggagacgagcatacagctgccctcaccaaggat
gggggtttgtttacgtttggggacggctctcgtggtcaactgggtcatgactccaccaac
aacgagcctctacccagacaggtgcaagagctgatgggcagcgaggtttcccagattgcc
tgtggcagacaccacaccctggcgtttgtgccttcctccggtctggtgtatgctttcggt
tgtaacaccaatggtcagctgggcaccgggacacgaggtgacatcaatagcccacttcct
gtcaaaagcagcctcacaggaaggctcacaggaagtcctcgtcatatgtcagggccagat
cattatgccattacaaaaatcaactgtggaggggaccataacttcctattgtactcagat
gaaaagagttccaccgctcctgaagacttccgcgtcactaacatcagtagaagcatctct
ttgataaatgatgccagtttgaatacgtggaggatgaaactcctagacaacacagattcc
actatcaccaatgacgtcattctcctgctgtcttccaccgcctgttggaacgccagcttc
ctggatgagagtgatgacagccattttaagaccaaccctaaagtccctggcatcgatctt
aactcagtccgcctgctgtttgagacactcagtaaaccgccctttgccagactactggag
caggccactaagagttttgagagcctgctgatcccccagctgccctgctctccccctgac
gttgaggccatgaggatctacctgatcctgtcggagtgtcccgccctgcacgactccaag
aactacatcaccctcaccatccccctagccatggccatactccgcctggatgccaacccc
agcaaagtgcttgataactggtggtgcctggtggacggcggtgtgttctccaggctggtg
gacatgtataagagcatcgtggtgttcctgttaaccggaggaaaggccctgctcgtccct
gtcttcctagaaaactacaccagtgccacgctaaagcttctagagaaacttcataaggtt
aacctgaaggccgggcatgtggagtacaaccgcttctatatccctgacatcaccaccctg
gtggacatccaggaagactacctcaagtggtttctgagtaaagcagagattaaaatgaga
acaccagcagtacagagctcagtgactttatgtgcctacccgttcatactgaacgcccaa
gccaagaccaccatgctgcaaactgacgctgagctacagatgcagatggcggtgagcggg
gccaacatgcataacgttttcatgctgctgacgctggaacccctgctggcgcggaacccc
ttcctggtgctccacgtacgcagggaccacttagtgagcgacgcgctgagagagctcacc
atctactctgacgtcgacctcaagaagcccctcaaggtgatatttgatggggaggaggcg
gtggatgcagggggggtaaccaaggagttcttcctactgctgttgaaggagctgatggac
cctgtgtacggcatgttcacccagtacacccagtccaacctgctctggttctctgataaa
tgttttgtagagcacaactggttcaatctgatagggatcatctgtgggctggccatctat
aacagcaccgtggtggacctccacttccccctggtcctttacaagaagctactgggcgtg
gcacccactctggaggacctcaaggagctgtcgcccacagagggcaggagtttacaacag
ctcctggaccatgaggaagatgacgttgaggagacattttgtctaaactttgctatcacc
agagagtactatggtctgacggaggttaaggagcttatccctggaggagaccgcatcacc
gtggacaagaacaacagggaggagtttgtggaggcctacctgaagtacatgttcagggac
tctgtgagcgagctgtaccaggccttctcctctgggttcctgaaggtgtgtggtgggaag
atcctgtcgctgttccagccctccgagcttatggccatggtggtgggaaacaacaactat
aactgggaggaaatggagaagaatgcggtttacaaaggagagtattcagccactcatccg
actgtgaggatgttttgggaggtattccatgagttccctctggaaaagaagaagcggttc
ttattattcctgacgggcagtgaccgcatccccatccatgggatggagagcctccgcatc
gccatccagtccacgtcggccgaggagcactatctgcctgtggcccacacctgctacaac
ctgctggacatgccccgctaccagaccaaagagaccctgcaccaccgtctcacccaggcc
gtggagcagtacgagggcttcagtctggtgtga
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integrated database retrieval system
