Salvelinus fontinalis (brook trout): 129855657
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Entry
129855657 CDS
T11136
Name
(RefSeq) LOW QUALITY PROTEIN: BLOC-2 complex member HPS3-like
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129855657
Membrane trafficking [BR:
sfon04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
129855657
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129855657
NCBI-ProteinID:
XP_055779528
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Position
5:44992146..45016994
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AA seq
1049 aa
AA seq
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MVHVYNCHPFASQQIVQTEQEPGLVCCGGGVLFVESAGGCKIEAFQLEAEGCPLICRFAT
MGTVQSILHSEIGDYLVTIEEKNNVTYLRTYTNWRYQVAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
ILHLPGLSPQQVAICAGYIALQAELEVLVVKLERLPGSAPTQKSADKKSQDHCLVPKDMI
TGAEHNNEIEVRKEGLAGHLDQDDFFIFPKHQELLGDNAKDCGVKVSLEWTGMESEARGI
LAVNYILYRRFAPDFFQGCSVEDTRLHSLQFHPVFTSNQEVCLGGGGGVEPTCVFCFFSL
PNTGYVYSVRGGVEMVSVYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCSAVAARAEDP
YIDTTMKACPPITMEVCALRIQLFIGLKALCHDRHHIVLLTAADVETREDTERAARRNLN
KKSSFTKHRDPIEMSHGWNLYVVNTVPPLQLYNEMVEYSKKYEETNPLSQSCLHLLSEAH
LLLRATLLDPRVGNPVEQPQSSDQNLAQSLGYTATDKIGSTTDRTTDRQELQQAFQESCA
HLGDCFSRFDKRDCHLALPYYKMSGLSVTEVISRNRCLSSSPCGYGKGFLFFLKHSLYEE
TMEELTEEAANKVLDIFGVAEPSQLPHVIASPSMVRASPDSGLAHLERLESIGAPSVPLT
LSKAALALRMGDLQLYRQHMDRHTEMLQVYGFIEEHKLLLHGRGHTVVPTPLARHLRDSQ
EGLLVAAMVALHENNKVKLDEADLFFQKLCGNLPGPQGGPQLLVDFWEALLIASSQKAVI
QELLFRLTSVYIDRVTRRDSHGMKPLKTADDLINSCSHYGVPYPWVSILTPAYFSIIQDH
QEDLQKLQSLLCGPTLDVSSILPLLEQLPDGDNAGLSVHLLCATKLDRHESSIERLLDRC
PQAIIPYANHELQNNKMTLWWQKLFPELCERTRAAGGENAILLSALKETLVVVAMELNPL
EFLDLLPDDGTAHFFLPHLLECSQRNLMT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccatcccttcgcttcccagcaaatcgtgcaaaccgaacag
gagcctgggttagtgtgttgtggcgggggtgtcttgtttgtggagtccgcgggaggatgc
aagatcgaggcatttcaactggaagcggaggggtgtcctcttatctgccgcttcgccacc
atggggactgtgcagagcatcttgcacagcgagataggggactacctggtgaccatcgag
gagaagaacaatgtcacctacctccgcacctacaccaactggcgctaccaggtggccgag
aagacccgtgtgggtgtgcgtctgctgggccacttcctgcgtggctcatccatgcgtgga
gctcccaaggagcagatggagatcattgagattccgctgtttgagcgcccactgtgtgta
gcgtgctgtggggtgacaggggacctgctggtggggtgtcctaagagcctggtgctgttc
agtctcaagagacaggccctcaacgataagctctccatcctggactttgagcgttgtctg
atcctccacctcccaggactgtcgccccaacaggtggcgatctgtgcggggtacattgcc
ctgcaggcagaactcgaagtgctggtggtcaagctggagagacttcctggctccgcccct
acccagaagtcagctgacaagaagtcccaggaccactgtctagtccccaaggatatgatc
actggagcagaacacaacaatgagatagaggtgaggaaagagggtcttgctggtcacctt
gatcaggatgacttcttcatcttccctaagcaccaggagctgctgggagacaatgccaag
gactgtggggtcaaggtctctctggagtggacaggcatggagagtgaagccaggggtatc
ctcgctgtcaactatatcttatacagacgttttgctccagacttcttccaaggctgcagt
gtggaggatacccgcctgcactccctgcagttccaccctgtattcaccagtaaccaggaa
gtgtgtctgggggggggggggggtgtggagccgacgtgtgtgttctgtttcttctcgctg
cccaacacgggctacgtgtacagcgtgaggggcggagtggagatggtctcagtctatcag
tatccagagaaagcccagcaggccgtcctcactgacctcttcctccacatcatcaccaag
aatgctctccagtgtttctcagtgaggtgttctgcagtggcagccagagctgaggaccct
tacatcgataccaccatgaaggcctgtcctcccatcaccatggaggtgtgtgctttgcgg
atccagctgttcattggtctaaaggctctgtgtcatgatcgccaccacatcgtcctgcta
accgctgcagacgtggagaccagggaggacacagagagggctgctcgcaggaacctgaat
aagaagtcatccttcaccaagcaccgggatcccattgagatgagtcacggctggaatcta
tacgtggtcaacaccgtccccccactccaactctacaatgagatggtggagtatagtaag
aagtatgaggagaccaaccctctgtctcagagctgtctgcacctgctcagtgaggcccac
ctcctcctgagagccacgctcctggacccccgggtgggaaatcccgtggagcagcctcag
agcagtgaccagaacctagcccagtccctgggatatacagcaacagacaaaataggcagc
accactgacagaaccacagacagacaggagctgcagcaggccttccaggagagctgtgcc
catttaggagactgcttcagtaggtttgataagcgtgactgccacctggccctgccctac
tataagatgtcaggcctgtctgtgacagaggtgatctccaggaacaggtgtctgtccagc
agcccctgtggctatgggaaggggttcctcttcttcctcaaacactcactctatgaggag
accatggaggagctcactgaggaggcagccaacaaggtgctggatatcttcggtgtggcc
gagccgtcccagctgccccatgttatagccagcccctccatggtcagagccagtcctgac
agtggactggcccacctagagcgcctagagtccatcggagccccctctgtacccctcact
ctctccaaggctgccctggccctccgcatgggagacctgcagctctacagacaacacatg
gacagacacacagagatgctgcaggtatatgggttcatcgaggagcacaaactgctgctg
catggcagagggcacacggtggtgcccacccccctagcacgccacctcagggacagccag
gaaggtctgctggtagcagccatggtggcgctacacgagaataacaaggtcaaactggac
gaggctgacctcttcttccagaagctttgtgggaacctgccggggccccagggaggccct
cagctgctggtggacttctgggaggccctgctgatagcctcgtcacagaaagctgtcatc
caggagctgctgttccgcctcacctctgtctacattgaccgcgtcacgcgccgagacagc
cacggcatgaaaccactcaagaccgcagacgacctgatcaactcatgttctcactatggt
gtgccgtatccctgggtcagcatcctgactccagcttacttcagtatcattcaagatcac
caggaggacctccagaaactacagtccctgctgtgcggtcccaccctggatgtgtcgtcc
atcctgcccctgttggagcagctgccggacggggacaatgcggggctaagtgtgcacttg
ctctgtgccaccaagctggaccgccacgagagctcaatcgaaaggcttctggaccgatgt
cctcaggccatcatcccctatgctaaccacgagctgcagaataacaaaatgactctgtgg
tggcagaaactgtttcctgagctgtgtgagagaaccagagcagcagggggagagaacgcc
atcttactgtctgccctcaaagaaacgctggtggtggtcgccatggagctgaacccactg
gagttcctggacctgttgcctgatgatgggacggcacacttcttcctgcctcacctgctg
gaatgcagccagagaaatctcatgacgtaa
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