Salvelinus fontinalis (brook trout): 129855832
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Entry
129855832 CDS
T11136
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129855832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129855832
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129855832
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
HECT type E3
129855832
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
129855832
NCBI-ProteinID:
XP_055779859
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Position
5:complement(53599050..53607737)
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AA seq
1012 aa
AA seq
DB search
MISWGEDSRNGFGLVKPNGLDTTKTDISCVNLIHLKSKIQGLSAGNSVVAFIRNNGRLVS
VARIQEDQDGRRITGKLKSVTCKETIRALSCGDSHAVLLSEEGRVLCLDKANILRPLDNL
CNRQVTQVACGDQHSISLTQDGQVFTWGQNTSGQLGLGWGEPSAMSPKPLKSLSGIPLVQ
ITAGGDHSFALSLSGAVFGWGKNTTGQLGLGDTTNRHAPAPVDCLNLKKTVLISCGGEHT
AVLTKGGVVFTFGSGRYGQLGHNSLRDELQPRVVGQLWGSKVTQIACGRHHTLAFVGPSN
KIYSFGHGEQGQLGNGVKIDQSVPLPVQLPDQIDEQKIEHIFAGGNHSFALCTHGQESEE
RSNNLRSSVGKVTQALDEEIIDKWISECDSKSWKKGQKEITKMFSSASCLNGSFLDKSCD
KHYQTSPKQSGLDFSLVRGAFRKLAKKDKVLTEVEAVVQHTLLPSLYEEPIGVEGLRVYL
VLPELLRVLHKQHRRTDLTEAVAAAILRLHPDKLQVLGDCWSSLKPSVMTKHIGVWKKAL
SGILRSGHILRTRDPGIKHLLQVLGHLHRANQKSVETQTVPDSTFCMEEVHFNPIFLEED
VKLWRLWSKQDVDQTPAIFCRYPFLMNLQSKINVFNINAALTQNPPNNRQRTGMWPFDMF
LVAAPAPFFELRLNRASLIEDTFHQLRVACPSTFKRSLVVYFDEDAKLTDVYKRDFFLHL
FDKLLVPEFGMFMYNDTETLAWFPAMPRVAEKHYFLFGVLCGMALYNNNMVHLPFPMAFF
KKLVNIKPSLEDLREFSPIEAKSLQYILDYPDDDVENMDMTFSVMWGDVAVELDPKETGK
LVTSANKKEFVDTYVNYIFNQSVEVVFEEFRKGFIKVCDMDVVEFFQPEELRGVMVGKEI
FDWETLKQNTVYEGEYHAGHPNIVTFWEVFEELTEDQKKAFLLFLTGCDRVPILGMNQIR
MRVQPLLNSSQQHFPEALTCHSLLQLPIYPSKEILQSRLIEAVGHNRGFWNE
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatggggagaggatagtcgtaatggctttggtttagtgaagccgaatggttta
gatacgaccaaaacggatattagttgcgttaatttgatacaccttaaatctaaaattcag
ggtctgtccgcaggtaacagtgtggtcgcgtttatcagaaataatgggagactagtgtct
gtcgcacggattcaagaggaccaagatgggagaagaattacagggaaactgaagagtgtg
acatgtaaggagacgattcgggctctgagttgtggagattctcatgctgttttactgtct
gaagagggccgggttctttgcttggacaaagccaatattctcagaccattggataaccta
tgtaaccgacaggtaactcaggttgcatgtggagaccagcattcaatttcactaacacag
gatggtcaggtgttcacatggggtcagaacaccagcggtcagctgggtttggggtggggc
gagcccagcgccatgtcccccaagcccctgaagtctctatcagggatccccctggttcag
atcactgcagggggagaccacagcttcgctctgtccctttctggagctgtgttcggctgg
ggcaagaacaccaccgggcagctgggactaggggacacaacaaacagacatgccccagct
cctgttgattgcctgaatctgaagaagactgttttgatttcatgtggaggagaacatact
gccgttctgacaaagggaggtgtggtgttcacatttggctcaggccgatatggacagctt
ggacacaactctctccgagatgaactacaacctcgagtggtggggcaactctgggggtca
aaggtgacccagatagcctgtggaagacaccacacattagcatttgtggggccctcaaat
aagatctactcatttgggcacggagagcaagggcagctgggaaatggagtaaagattgat
cagtctgtgccccttccagtacaactgccagaccagattgatgaacagaaaattgaacac
atttttgctggaggaaaccattcctttgcattgtgcactcatggtcaggagtctgaagaa
aggtctaacaatctcaggtcaagtgtgggcaaagtgacacaagctttagatgaagaaatc
attgacaaatggatctcggaatgtgattcaaagtcttggaaaaaaggacagaaggaaatc
acaaaaatgttttcttctgcatcatgtttaaatgggagctttcttgataaaagttgtgac
aaacattaccaaacctcaccaaaacagtctggcctggatttttcactcgtccgaggcgca
ttccggaagctggcgaaaaaggacaaagttttgactgaggttgaagctgttgtccagcac
acactgcttccctccctgtatgaggagcccattggagtggagggcttgagggtctacctg
gttctccccgagctcctcagggtccttcacaaacagcacagaaggacagatctcaccgaa
gccgttgctgctgctatcctcagactgcaccccgacaagctgcaggtcctcggtgactgc
tggtcctcattgaagccatctgtcatgaccaagcacattggggtgtggaagaaggccctg
tcggggattctgaggagtggacatattctacgcactcgtgaccctgggatcaaacacctg
ctccaggtcctcggccatctccacagagcaaaccagaaatctgtagagacccagactgtt
ccagacagtaccttttgtatggaggaggttcacttcaatcctatttttctagaggaggat
gtaaagctttggcgtttatggtcaaagcaggatgtggatcagacacctgccatcttttgt
cgttacccatttttgatgaatctgcagagcaagataaacgtttttaacatcaacgccgca
ctcacacagaatccacctaacaatcgccaaaggactggcatgtggccttttgacatgttc
ctcgtggcggcgcctgctccgttctttgagctgaggctgaatagagcatcactcatcgaa
gacactttccatcaactgagagtggcatgtcccagtaccttcaagaggtcccttgtggtg
tatttcgacgaggatgcgaagctgacagatgtctacaaaagggacttcttcctccatttg
tttgataagctgttggtccccgagtttgggatgttcatgtacaacgacacagagacgctg
gcctggttccctgcaatgcctagagttgcggagaagcattatttcctgtttggagttctg
tgtgggatggccctgtacaacaacaacatggtgcacctccccttccccatggccttcttc
aagaagctggtgaacatcaagccctctttagaggacctgagagagtttagccccattgaa
gcaaagagtttgcagtacatcttggattaccctgatgatgatgttgaaaacatggacatg
actttctcagtgatgtggggtgatgtagcggtggaacttgatcccaaagaaactggaaaa
cttgtcacaagtgctaataagaaggagtttgttgacacctatgtgaactacatcttcaac
cagtcagtagaggtggtgtttgaagagttcaggaaaggcttcatcaaggtgtgtgacatg
gacgtggtggagttcttccagccagaggaactgaggggagtgatggtggggaaggagatt
ttcgactgggagacgctgaaacagaacactgtgtatgaaggagagtaccatgctgggcat
cccaacatcgtcacattctgggaggtgtttgaggaactgacagaggatcaaaagaaagca
ttcctgttgttcctgactggctgtgatcgtgtgcccatcctgggtatgaaccagatcagg
atgcgggtccaaccacttctcaactcctcccaacagcatttcccagaggcgctgacctgt
cactctctgttgcagctgcccatctacccctccaaagagatactacagagcaggcttata
gaggctgttggccacaacagaggcttctggaatgaataa
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