Salvelinus fontinalis (brook trout): 129855844
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Entry
129855844 CDS
T11136
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129855844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129855844
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129855844
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
HECT type E3
129855844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
129855844
NCBI-ProteinID:
XP_055779880
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Position
5:complement(53675960..53687099)
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AA seq
1013 aa
AA seq
DB search
MISWGEDSRNGFGLVKPNGLDTTKTDISCVNLIHLKSQIQGLSAGNSVVAFIRINGRLVS
VARIQEDQDGRRITGKLKSVTCKETIRALSCGDSHAVLLSEEGRVLCLDKANILRPLDNL
CNRQVTQVACGDQHSISLTQDGQVFTWGQNTSGQLGLGWGEPSAMSPKPLKSLSGIPLVQ
ITAGGDHSFALSLSGAVFGWGKNTAGQLGLGDTTNRHAPAPVDCLNLKKTVLISCGGEHT
AVLTKGGVVFTFGSGRYGQLGHNSLRDELQPRVLGQLWGSKVTQIACGRHHTLAFVGPSN
KIYSFGHGEQGQLGNGVKIDQSVPLPVQLPDQIDDQKIEHIFAGGNHSFVLCTLGQESEE
RSNNLRSSVGKVTQQAIDEKIIDKWISECDSKSWKKGQKEITKMFSSASCLNGSFLDKSC
DKHYQTSPKQSGLDFSLVRGAFRKLANKGKVLTEVEAVVQHTLLPSLYEEPIGVESLRVY
LVLPELLRVLHKQHRRTDLTEAVAAAILRLHPDKLQVLGDCWSSLTPSVMTKHIGVWKKA
LSSILRSEHILRTRDPGINHLLQVLGHLHRANQKSVETQTVPDSTFCMEEFHFNTKFLEE
DVKLWRSWSKQDVDQTPAIFCRYPFLMNLQSKINVFNINAALTQNPPNNRQRTGMWPFDM
FLMAAPAPFFELRLNRASLIKDTFHQLSVACPSTFKRFLVVYFDEDAKLTNVYKRDFFLH
LFKKLLVPESGMFMYNDTETLAWFPAMPRVAEKHYFLFGVLCGMALYNNNMVHLPFPMAF
FKKLVNIKPSLEDLREFSPIEAKSLQYILDYPDDDVENMDMTFSVMWGDVAVELDPKETE
KLVTSANKKEFVDTYVNYIFNQSVEVVFEEFRKGFFKVCDMDVVEFFQPEELRGVMVGKE
IFDWETLKQNTVYEGEYHAGHPNIVTFWEVFEELTEDQKKAFLLFLTGCDRVPILGMNQI
RMRVQPLLNSSQQHFPEALTCHSLLQLPIYPSKEILQSRLIEAVGHNRGFWNE
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatggggagaggatagtcgtaatggctttggtttagtgaagccgaatggttta
gatacgaccaaaacggatattagttgcgttaatttgatacaccttaaatctcaaattcag
ggtctgtccgcaggtaacagtgtggtcgcgtttatcagaataaatgggagactagtgtct
gtcgcacggattcaagaggaccaagatgggagaagaatcacagggaaactgaagagtgtg
acgtgtaaggagacgattcgggctctgagttgtggagattctcatgctgttttactgtct
gaagagggccgggttctttgcttggacaaggccaatattctcagaccattggataaccta
tgtaaccgacaggtaactcaggttgcatgtggagaccagcattcaatttcactaacacag
gatggtcaggtgttcacatggggtcagaacaccagcggtcagctgggtttggggtggggc
gagcccagcgccatgtcccccaagcccctgaagtctctatcagggatccccctggttcag
atcactgcagggggagaccacagcttcgctctgtccctttctggagctgtgttcggctgg
ggcaagaacaccgccgggcagctgggactaggggacacaacaaacagacatgccccagct
cctgttgattgcctgaatctgaagaagactgttttgatttcatgtggaggagaacatact
gccgttctgacaaagggaggtgtggtgttcacatttggctcaggccgctatggacagctt
ggacacaactctctccgagatgaactacaacctcgagtgttggggcaactctgggggtca
aaggtgacccagatagcctgtggaagacaccacacattagcatttgtggggccctccaat
aagatctactcatttgggcacggagagcaagggcagctgggaaatggagtaaagattgat
cagtctgtgccccttccagtacaactgccagaccagattgatgaccagaaaattgaacac
atttttgctggaggaaaccattcctttgtattgtgcactcttggtcaggagtctgaagaa
aggtctaacaatctcaggtcaagtgtgggcaaagtgacacaacaagctatagatgaaaag
atcattgacaaatggatctcggaatgtgattcaaagtcttggaaaaaaggacagaaggaa
atcacaaaaatgttttcttctgcatcatgtttaaatgggagctttcttgataaaagttgt
gacaaacattaccaaacctcaccaaaacagtctggcctggatttttcactcgtccgaggc
gcattccggaagctggcgaataagggcaaagttttgactgaggttgaagctgttgtccag
cacacactgcttccctccctgtatgaggagcccattggagtggagagcttgagggtctac
ctggttctccctgagctcctcagggtccttcacaaacagcacagaaggacagatctcacc
gaagccgttgctgctgctatcctcagactgcaccccgacaagctgcaggtcctcggtgac
tgctggtcctcattgacgccatctgtcatgaccaagcacattggggtgtggaagaaggcc
ctgtcgtcgattctgaggagtgaacatattctacgcactcgtgaccctgggatcaatcac
ctgctccaggtcctcggccatctccacagagcaaaccagaaatctgtagagacccagaca
gttccagacagtaccttttgtatggaggagtttcacttcaataccaaatttctagaggag
gatgtaaagctttggcgttcatggtcaaagcaggatgtggatcagacacctgccatcttt
tgtcgttacccattcttgatgaacctgcaaagcaagataaatgtttttaacatcaacgcc
gcacttacacagaatccacctaacaatcgccaaaggactggcatgtggccttttgacatg
ttcctcatggcggcgcctgctccgttctttgagctgaggctgaatagagcatcactcatc
aaagacactttccatcaactgagtgtagcatgtcccagtaccttcaagaggttccttgtg
gtgtatttcgacgaggatgcgaagctgacaaatgtctacaaaagggacttcttcctccat
ttgtttaaaaagctgttggtccccgagtctgggatgttcatgtacaacgacaccgagacg
ctggcctggttccctgcaatgcctagagttgcggagaagcattatttcctgtttggagtt
ctgtgtgggatggccctgtacaacaacaacatggtgcacctccccttccccatggccttc
ttcaagaagctggtgaacatcaagccctctttagaggacctgagagagtttagccccatt
gaagcaaagagtttgcagtacatcttggattaccctgatgatgatgttgaaaacatggac
atgactttctcagtgatgtggggtgatgtagcggtggaacttgatcccaaagaaactgaa
aaacttgtcacaagtgctaataagaaggagtttgttgacacctatgtgaactacatcttc
aaccagtcagtagaggtggtgtttgaagagttcaggaaaggcttcttcaaggtgtgtgac
atggacgtggtggagttcttccagccagaggaactgaggggagtgatggtggggaaggag
attttcgactgggagacgctgaaacagaacactgtgtatgaaggagagtaccatgctggg
catcccaacatcgtcacattctgggaggtgtttgaggaactgacagaggatcaaaagaaa
gcattcctgttgttcctgactggctgtgatcgtgtgcccatcctgggtatgaaccagatc
aggatgcgggtccaaccccttctcaactcctcccaacagcatttcccagaggcgctgacc
tgtcactctctgttgcagctgcccatctacccctccaaagagattctacagagcaggctt
atagaggctgttggccacaacagaggcttctggaatgaataa
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