Salvelinus fontinalis (brook trout): 129855870
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Entry
129855870 CDS
T11136
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129855870 (ift140)
Cilium and associated proteins [BR:
sfon03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
129855870 (ift140)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
Beta-prop_WDR19_1st
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_HPS5
WD40_WDHD1_1st
WD40_Prp19
TPR_GEMI5
TPR_IFT80_172
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Clathrin
Beta-prop_WDR75_1st
RPN7
Consortin_N
tRNA_int_end_N2
Rax2
Motif
Other DBs
NCBI-GeneID:
129855870
NCBI-ProteinID:
XP_055779943
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All DBs
Position
1:complement(47006472..47054298)
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AA seq
1460 aa
AA seq
DB search
MSVYFDHRIEAPESSGGPSQVAWHPTQPVLAVASNSPTTGGNIDLYLQQGEHVGSCHVDR
PFQPTVLRWHPTKPLLALGWETGEVLLLTHPSGEQTPLPTTHTACITLLEWSSSGSRLIT
GDQMGVLALWKVDARGRLQGSHIVKHDYTKPLTYCIFRPAPPGEDVAMLARAAVGGDESA
LDMFNWRKAGNGPPLKMGPQEGLVFYVGTADGKVHCVDEHGRSSPVLSVDGSIQKLFYLK
RREVLAVVTETLLLSQYTLGPEGGAQELMKVKLSGKSGQSADIVSTETGLLITATGEQVI
RLWDLERDDNYVLSLDESLGFEKGEVLNCVSYCTAKEILAAGTNRGRIALWRMVSQPNTR
TDTKAQWKLQTPTEIEGNVTQLQWGSNLNLLAANSVTTVLILCEHVMSAHFGQQVAAVQL
TPSQLSLTMFNTNSHLTLRSDMHIKGVCVTKDTVTVWNGKQVTVYEPSGATLRNTGSFLC
ESQILAVHDENIYTVEPNRVQVRTPQGTVKQLLAFSEAEGNPVLLSVCQGYLVVGTDTAH
IKVFDLTRREAKAHCSAKNLVDLTPNLGALRSVKCNANGNQVSILVTRVNGRPDHRMYFY
DVEMDTLSHFDFFTGRPPSGISQADDTERRPLTELSERCPVSHFWDENEPRLFVCETVLV
NSPQMDHLDRVDVLVVTFFCTQEHGLLLQDSYPKPAGLQALLALDVPYYYFTCKTGERDP
EAEEAQAPDPTQSPTLAQASVPAAQSPHMVSRRALRDFQGLENCEKATRDAMLNFSFYLT
IGNMDEAFKSIKLIKSEAVWENMARMCVKNRRLDVARVCLGNMGNARAARALREAEAEPE
LEARVAVLALQLGMLEDAEKLYKSCGRFDLLNKFYQASGQWQQAVETAETHDRIHLRTTY
YSYAKYLEAIGDKSMALVFFEKSDTHRFEVPRMLLDDALSLEIYVNKMKDKNIYKWWAQY
LESQSDMESALRYYEYAQDFLSLVRVHCYLGNIQKASEIANETGNRAASYHLARQYESQE
EIKQSVHFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNPEDMMEAACYYEEKGSHMDRA
VMLYHKAGHFSKALEVAFATEQFAALQLIAEDLDETSDPALLARCSDFFIKHGQYEKAVE
LLVAAKKYHEALQLCLDQSLTITEDLAESMTVTKESKDLSEEARKELLERIADCCMRQGN
YHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDWRKDPE
IMKNIISFYTKGRALDLLAGFYEACAQVEIDDYQNYEKALGALTEAYKCLSKAKGRSPDE
HEARMAELQHKITLVKRFVQARRLYEEDPGEAVRLCEALLEEPDLDPAVRIGDAYGFLVE
HHCQQGSFQVAYRKLEDLQKLLPSLNISYYVSQGSLDALQRAVGVPLGRGQLSGRGDRRN
SGGEEDEVEEDEALVSHQGD
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtactttgatcaccgtatcgaggcccctgaatcaagcgggggcccctctcag
gtggcatggcatcccactcagcctgtactagcagtggcctccaacagccccaccaccggg
ggcaacattgacctttacctccaacagggggagcatgtagggagctgccacgtggaccgt
cccttccagcccacggtgctgcgttggcaccccaccaagcctctgctggctctgggctgg
gagacaggcgaggtgctgctgctcacacacccctctggagagcagacgccgctgcccacc
acacatactgcctgcatcaccctgctggagtggagcagctccggcagccgcctgatcacc
ggggatcagatgggagttctcgcgttatggaaggtggacgctcgaggaagactacaggga
agtcacatagtgaagcacgactacaccaaacccttaacctactgtatcttcagaccagca
cccccgggagaggatgtggcgatgctggcgcgggcggcagtgggcggggacgagagtgcc
ctggacatgttcaactggaggaaggctgggaatggaccgccgctcaagatgggccctcag
gagggtctggtgttctacgtcggcacggcagacggcaaggtgcactgtgtggatgagcat
ggcaggagcagcccagtgctcagtgtggacggctccatccagaagctcttctatctgaag
aggagagaagtcctggccgttgtcacggaaacccttttgttatcgcagtacactctggga
cctgaggggggagcccaggagctcatgaaggtgaagctgagtgggaaaagtggccaaagc
gcagacatcgtttcaacagagacaggcctcctcatcacagctacaggggaacaggtcatc
aggctctgggacttggagagggatgacaactatgtgctttctctggatgagagccttggc
tttgagaaaggagaggtgttgaactgtgtctcctactgcacagccaaagagatcctagct
gcaggcaccaacagggggcgtatagctctgtggaggatggtgagccagcccaacaccagg
acagacaccaaggcccagtggaaactacagacacccacggagatcgagggcaatgtcacc
cagctccagtggggctccaacctgaacctgctggctgccaacagtgtgaccacagtgctg
atcctctgtgagcacgtcatgtctgcccacttcggccagcaggtggcagctgtgcagctg
accccatctcagctcagcctcacaatgttcaacaccaactcccacctcaccctgcgttcc
gacatgcacatcaagggtgtctgcgtcaccaaggacacagtcacagtgtggaacgggaag
caggtcactgtgtacgaaccctcaggggcaactctacgcaacacaggctctttcctgtgt
gagtcccagatcttagctgtgcatgatgagaatatctacactgtggagcccaatagagtc
caggtccgcacaccacagggcacagtgaagcagctactagccttctctgaggccgagggc
aaccctgtgctgctcagtgtgtgtcagggctacctggtggtgggaacagacacagctcac
atcaaggtctttgacctcactcgcagagaagccaaagcccactgcagtgctaagaaccta
gtggacctgacccctaatctgggagccctgagatcggtcaagtgtaacgccaatggcaac
caagtcagcatcctggtcactcgggtgaatgggagacctgaccacagaatgtacttctat
gacgtagagatggacacactctctcactttgacttcttcactggtagaccgcctagtggc
atctcacaggccgacgacacagaaagacggccactgacagagctgagcgagagatgtcct
gtgtctcatttctgggatgagaacgagcctcgtctgtttgtgtgtgagacggtactggtc
aactctccccaaatggaccatctggacagggtggatgtgctcgtggtgacgtttttctgc
actcaggaacatgggctcctcctgcaggactcctatcccaaaccagccggcctgcaggcc
ctactggccctggacgttccctactactacttcacctgtaagacaggtgagagggatcca
gaggcggaggaggcccaagctccagaccccacccaatctccaaccctggcccaggcctca
gtcccggctgcccagtccccccacatggtgtccagacgagccctccgggactttcagggc
ctggagaactgtgaaaaggccacccgcgatgccatgctcaactttagcttctacctgacc
atcggaaacatggacgaggccttcaagtccatcaagctcatcaagagtgaggcagtatgg
gagaacatggcgaggatgtgtgtgaagaaccggcgtctggacgtggcacgggtgtgtctg
ggcaacatgggtaatgccagggcggcgcgggcgctacgggaggccgaggccgagcctgaa
ctggaggccagggtagcagtactggcccttcaactgggcatgctggaggatgcagagaag
ctgtataagagctgcgggcgcttcgacctcctgaacaagttctaccaggcatctggccag
tggcagcaggccgtggagacagcagagacccacgaccgtatccacctcaggaccacttac
tacagctatgccaaatacctggaggccatcggagacaagagcatggccctcgtgttcttt
gagaagtctgacacccaccggttcgaggtacccaggatgctcctagatgatgcactgtct
ctggagatttacgtcaacaaaatgaaggacaaaaacatctataagtggtgggctcagtat
ctggagagccagtcagacatggagtcagcactacgctactacgagtacgcacaggacttc
ctctctctggtccgcgtgcactgctacctggggaacattcagaaggcgtcggagatagcc
aatgagacggggaaccgtgctgcctcgtaccacctagcccggcagtatgagagtcaggag
gagatcaaacagtctgtccacttctacacacgagctcaggcctacaacaacgccatccgc
ctctgcaaggagaatggtctggatgaccagctgatgaacttggctctcctcagtaaccca
gaggacatgatggaggctgcctgttattacgaggagaagggttctcatatggaccgtgct
gtcatgctctaccacaaggctggtcatttctccaaggctctggaggtggcctttgctaca
gaacagttcgctgcactgcaactcatagcagaggacctggatgagacatctgacccagcc
ctgctggcccgctgctctgacttcttcatcaaacacggccagtatgagaaggctgtggag
ctgcttgtggccgccaagaagtaccacgaggccctgcagctgtgtctggaccagagcctg
accatcactgaggacctggctgagagtatgaccgtgaccaaggagtccaaagacctctca
gaggaggcccgcaaggagctactggagagaatagctgactgctgcatgcgccagggcaac
taccacctagccaccaagaaatacacacaggctggcaacaagctaaaagccatgcgggcg
ctcctgaagtcaggggacacagagaagatagtgttcttcgctggcgtgtcacgtcagaag
gagatctacatcatggccgccaactacttgcagtctctggactggcggaaagatccggaa
atcatgaagaacattattagcttctacaccaaaggcagggctctggacctgctagctggc
ttctatgaagcttgtgcccaggtggagatagatgattaccagaactatgagaaggcgctg
ggtgctctgacagaggcctataagtgcctttcgaaagctaagggccgcagcccagacgaa
cacgaggctcgcatggctgagctgcagcacaagatcactctggtcaagaggttcgtccag
gcacgcaggttgtatgaggaggacccaggtgaggcagtgcgtctgtgcgaggccctgcta
gaagagccagacctggaccctgctgtcaggataggagatgcatatggcttcctggtggag
catcactgtcagcagggcagcttccaggtggcctaccgcaagctggaggatctgcagaag
ctgctgccctctctgaacatcagctactacgtgagccagggcagcctggatgccctgcag
agggcagtgggtgtacccctgggccgggggcagctctcaggcaggggagaccgacgcaac
agcgggggagaggaggacgaggtggaggaggacgaagccctggtgtcccaccaaggggac
tga
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integrated database retrieval system
