Salvelinus fontinalis (brook trout): 129855894
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Entry
129855894 CDS
T11136
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129855894
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Protocadherins
129855894
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
129855894
NCBI-ProteinID:
XP_055779967
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Position
5:56642097..56652052
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AA seq
916 aa
AA seq
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MILLLPLLLSVLLDGAVCQLRFSVPEEQEHGTVIGNIAEDLGLDITKLSARRFQTVASSR
NPYLDVNLENGNLYVKEKIDREEICRQTVPCNLHLEVFLENPLELFRVEIEVMDINDNPP
TFPETDITVEITESATPGTRFPVENAFDPDVGTNALSTYAITNNNYFYLDVQTQSDGNKF
AELVLEKPLDREQQAVHRYVLTAVDGGVPQRTGTALLVVKVLDSNDNAPIFDQSVYTVSL
RENSPVGTLVIQLNATDIDEGQNGEIVYSFSNHNPARVKDLFKIDARTGRIEVAGEVDYE
ESSTHQIYVQAKDLGANAVPAHCKVMVKLVDVNDNTPEISFSTVTESVSEQDAPGTVIAL
FSVTDRDSGDNGLVSCEILGDVPFKLKSSFKNYYTIVTDGLLDREHADSYTITVVAKDQG
LPSLATSKSIKVHVSDENDNAPRFTQPVYDVYVTENNVPGAFIHAVSAADPDVGPNALIT
YSILECAIQGMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGSPELSSNSTV
NVIIVDQNDNAPSVIAPIGKNGTAKEHLPRSAEPGYLVTRVVAMDADDGENARLSYSILR
GNEMGMFRMDWRTGELRTARRVFTKRDPQGSYDLLIEVRDHGQPPLSSSASVTVILVDSV
IDGRSGDRGGSSSKSKETSLDLTLILIIALGAVSFIFLLAMIVLAVRCQKDKKLDLYTCL
MAGECCLCCSPCCSRQAHSRKQKKLSKSDIMLVQSTNVTTGVGAVGQVPVEESGVSGVGM
GGGFGSHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHTTPCGAIVAGYSDQQ
PDILSNGSILSNENKHQRTELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHD
ATNRGHAGESCHNYPG
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgattttgttattaccgctccttctctcggtcttgctggatggagcggtgtgccagctg
cgcttctctgtaccagaggagcaagaacacgggaccgtcattgggaatatcgcggaggat
ttggggttggacatcaccaaactttccgcccgccgcttccagactgttgccagctcgcgg
aacccttacttggacgtgaacctggagaacgggaatctttatgttaaggagaaaatagac
cgggaggagatatgcaggcagacagtaccgtgcaacctgcacctcgaggtgtttctggag
aacccgctcgagcttttccgcgtggagatcgaggtgatggatatcaacgacaatcccccc
actttccccgagacagacatcactgtagaaataacggaaagtgccaccccaggtacccgg
ttcccggtggagaatgctttcgacccagacgtcgggactaacgcgctcagcacctacgcc
ataacgaacaataactacttttacctggatgttcagacacagagcgacgggaacaagttt
gcggagctcgtgctggaaaagccgctcgaccgggagcagcaggcggtgcatcggtacgta
ctcacggcagtggacggaggcgtgccacaacggactggcaccgcgctcctggtcgttaaa
gtcttggattccaacgataacgcacccatctttgaccagtcggtgtacacggtgagccta
cgggagaattcaccggtgggcacgctggttattcagctaaacgccactgatatagatgaa
gggcagaacggagagatagtgtattcattcagtaaccacaacccggcgagggtaaaggat
ctttttaaaatcgatgccaggacggggagaatagaggtggctggggaagtggactatgag
gagagtagtactcaccagatatatgtccaggctaaagacctgggagcgaacgcagtgccc
gcgcattgcaaagtcatggtcaaactggtcgacgttaacgacaacacaccggagatcagt
ttcagcacggtgaccgagtctgtgagcgaacaggacgccccgggcaccgtcatagccctc
ttcagcgtcaccgaccgggactcgggcgacaacgggctggtgagctgcgagattttgggt
gacgttcctttcaaactcaaatcgtcatttaaaaactactacaccatagtaacggatgga
ctattagacagagaacacgcagactcatacacaatcaccgttgtagccaaagaccagggg
ctcccctctctcgccacgagcaaatccatcaaggtacatgtttccgacgagaacgataat
gcaccccgctttacgcagccagtttacgacgtgtatgtgacggagaataatgtgccaggt
gcttttattcacgcggtgagcgccgcggaccctgacgtcggtccgaacgccctcattacc
tactccatattggagtgtgccatccagggcatgtccgtcgacacctatgtgtcaatcaac
caggacactggttatctttatgcgctgcgctcattcgactatgaacagttgaaagagttt
agctttatggtacaagccaaagactccgggagcccagagctctcctccaacagcaccgtt
aatgtcattattgtagaccagaatgacaacgcgccttcggtgatagccccgatcggtaag
aacggcaccgccaaagaacacctgccgcgctccgctgagccgggctacctggtcacgcgg
gttgtcgccatggacgcagatgatggcgagaacgcacggctctcctacagcattctgcgt
ggcaatgagatgggcatgttccgcatggactggcggacgggggagctgcgtacagcacgc
cgtgtcttcaccaagcgcgacccccagggctcctacgacctgctgattgaggtgagggac
cacggacagccaccgctctcctcctcggctagcgtgactgtcatcctggtggatagtgtg
atagatggacggagtggagaccgaggaggatcttcatccaagtccaaagagacctctctg
gatctcaccctcatcctcatcatcgccttgggtgccgtctccttcatcttcctcctggct
atgatcgtgctggctgtgcgctgccagaaagacaagaagctggacctgtacacgtgcctc
atggcgggggagtgttgcctgtgctgcagcccgtgttgctcgcgccaggcgcacagcagg
aaacagaagaagctcagcaagtcggacatcatgctggtccagagtaccaacgtcaccacc
ggtgtgggcgctgtgggccaggtgcctgtggaggagtctggtgtcagcggggtcgggatg
ggcggtgggttcggttcccatcatcagaaccagaactcctactgctaccaggtgtgtctg
acaccggagagtgctaaaacggacctgatgttcctcaaaccatgcagcccctcgcgcagc
accgacacagaccacaccaccccctgcggtgccatagtggccgggtacagcgaccagcaa
ccggacatcttatccaacgggagcatcctctccaatgagaacaaacaccagcgaacagag
ctcagttacctagtggacagaccaaggagagtgaacagttctgcgttccaagaagcggac
atcgtgagttctaaagacagcggtcacggggacagcgagcagggagacagtgatcacgac
gccaccaaccggggtcatgccggtgagtcctgccataattaccctggctaa
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