KEGG   Salvelinus fontinalis (brook trout): 129856025
Entry
129856025         CDS       T11136                                 
Symbol
polr1e
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129856025 (polr1e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfon03021]
    129856025 (polr1e)
Transcription machinery [BR:sfon03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     129856025 (polr1e)
SSDB
Motif
Pfam: RNA_pol_I_A49 Arginosuc_synth
Other DBs
NCBI-GeneID: 129856025
NCBI-ProteinID: XP_055780133
LinkDB
Position
5:65017174..65039689
AA seq 413 aa
MDANCTLVCCEEEREDDKAVIVQFSNGNLRNTEQLDFSFYKNVDETNPRKKNRRMLVAES
QRLSYVGSNFGTEALKCNNLCKYYVGVLNKETMRMEVHSAQLFNMQPVIPGESSTENDTS
QNTDLTYREKVDSLIEAFGTNKQKRALSSRRLNQVGSEALQSAVAKAAHSIIDQKGLKAL
QQEVVQSQSGVSHYLPPCYHDADTPQHVYLFDDILSPVEYDALDAAGSKMAALTPEELQN
ITDGGCQSVVRHLESLPREGVARERQARCAFYLLMMLKLARQRHINRKFGQEEGCPRIIH
TKLMRTFTVETFNNGRVQNVVSTSMRVKMAAYCLALLLHMGDMTSDLTLLHRDLGVTEKR
IVEVAKSMGLTLVRHGCVKGNDGATAENRLATLVLPLVKYQPFIEIRKRKKMH
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggacgcaaactgcacattggtttgctgtgaagaggagagagaagacgataaagctgtt
atcgttcagttctctaacggcaacctgaggaacacagagcagctggacttcagcttctat
aagaacgtggacgagaccaacccgaggaagaagaaccgacgcatgctggttgcagaatca
cagagactctcatatgttgggagtaactttggaacagaagccctaaaatgcaacaacctt
tgcaagtattatgtgggggtgctgaacaaggagaccatgaggatggaggttcacagcgct
caactattcaacatgcagcccgtcatcccaggggagtcgtcgacagagaacgatacgtcc
cagaacacagatcttacatacagggaaaaggtggactctctgatcgaagcgtttggcacc
aacaagcagaagagagctctgtcttccaggaggctgaaccaggtgggcagtgaggccctg
cagagcgctgtggccaaggctgcccactccatcatagaccagaagggcctgaaagctctg
cagcaggaggtggtccagtcccagtctggagtttctcattaccttcccccctgttaccac
gacgctgacacacctcaacacgtctacctgtttgacgacatcctgtctccggtggagtac
gatgccctggatgctgctggttccaagatggccgccctgacccctgaggaactacaaaac
ataacagacggagggtgtcagagcgtggtgcgtcacttggagagcctgcccagagagggc
gtggccagagagagacaggcgcgctgtgccttctacctcctcatgatgctcaaactggca
cggcagagacacatcaatcgcaagttcgggcaggaggagggctgtcctcgtatcatccac
accaagctgatgaggaccttcaccgtggagaccttcaataacggcagggtgcagaacgtg
gtgtctacgtcgatgcgtgtgaagatggcagcgtactgcctggccctgctgctccacatg
ggagacatgacctctgacctcacactgctacacagagacctgggggtcacagagaaacgg
atcgtggaggtggccaagtcgatggggttgaccctggtcagacatggctgtgtgaagggg
aacgatggggcgacagctgaaaacagactggccactctggtgctgcccctcgtcaaatac
caaccgttcatagagatacgcaaacgcaaaaaaatgcattag

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