Salvelinus fontinalis (brook trout): 129856705
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Entry
129856705 CDS
T11136
Symbol
raraa
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129856705 (raraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfon03310
]
129856705 (raraa)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129856705 (raraa)
Nuclear receptors [BR:
sfon03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
129856705 (raraa)
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NCBI-GeneID:
129856705
NCBI-ProteinID:
XP_055780413
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Position
1:48477727..48669822
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AA seq
496 aa
AA seq
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MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGVPHPYSSSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESPRSSSKGGMALGPQPPPPPLETG
RGQTGAPGADRAAPPAVRNDRNKKKKDEKKPECTESYVLSTETEQMINRVSKAHKETFPS
LCQLGKYTTSNSSERRVALDVNLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLL
KAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEM
DDAETGLLSAICLLCGDRQDLEQADKVDVLQEPLLEALKIYVRKRRPHKPHMFPKMLMKI
TDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLESGATGSRTSGALPGSCSPSL
SPSSAQSSPSPTTQSP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagtgtggacgtcgtgggactgaatcccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgtttgatcccggagaaaggacttgtgcccgga
gtgccccatccctacagctcgtccatcagaaaccaacactggaacggctcaaatcactct
atagagacgcagagtaccagctcagaggagatagtgccgagcccgccgtcgccccctcct
cccccgcgggtctacaagccctgcttcgtgtgccaagacaagtcctcaggataccactat
ggagtcagcgcctgtgaaggctgcaagggcttctttcggaggagcatccagaagaacatg
gtgtacacgtgtcaccgggagaagaactgcatcatcaacaaggtcaccaggaaccgctgc
cagtactgccggctgcagaaatgcctggaagtgggcatgtccaaggagtctcctcgctcc
agctccaaaggcgggatggcgttgggcccccagccgccgcccccacccttggagaccggg
aggggacagactggggcgccaggggcggacagggcagctcccccggcggtgaggaacgac
cggaacaagaagaagaaggatgagaagaagccggagtgtactgagagctacgtgctgagc
actgagacggagcagatgatcaacagggtcagcaaggcgcataaggagaccttcccttcc
ctctgccagctgggcaaatacactacgagtaacagctcggagcggcgtgtggctttggac
gtgaacctgtgggacaaattcagcgagctgtccaccaagtgtatcatcaagacggtggag
tttgccaagcagctgcccggcttcaccacgctcaccatcgctgaccagatcaccctgctc
aaggccgcctgtctggacatactgattctgcggatctgcacgcgctacacaccggagcag
gacaccatgacgttctcggacggcctgacactaaaccggacccagatgcacaatgccggc
ttcggaccgctcaccgacctggtgttcgccttcgccaaccagctcctccccctggagatg
gacgacgccgagacggggctgctcagcgccatctgtctgctgtgtggagatcggcaggac
ctggaacaggcagacaaggtggacgtactacaggagcccctactggaggctttgaagatc
tacgtgaggaagaggaggcctcacaaaccacacatgtttcccaagatgctgatgaagatc
accgacctgaggagcatcagtgccaaaggagccgagcgtgtcatcaccctgaagatggag
attccgggctccatgccccctctcatccaggagatgctggagaattctgagggtctggag
agtggggccacaggctcccggaccagtggggccctcccaggcagctgcagccccagccta
tccccaagttccgcccaaagcagccccagccccaccacgcagtcaccgtag
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