Salvelinus fontinalis (brook trout): 129856862
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Entry
129856862 CDS
T11136
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129856862 (cdkal1)
Enzymes [BR:
sfon01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
129856862 (cdkal1)
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
129856862 (cdkal1)
Prokaryotic type
Methylthiotransferases
129856862 (cdkal1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
129856862
NCBI-ProteinID:
XP_055780570
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Position
6:2178389..2993466
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AA seq
564 aa
AA seq
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MPSACDSLIDDIEDMVSADDPTPQERQYARKSIIPRARKRNTQQTTEVLQADSVIPGMQK
IWMRTWGCSHNNSDGEYMAGQLAASGYRMTEDPAEADLWLLNSCTVKNPAEDHFRNSIKK
AQEQDKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKNN
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPVEELVERARQS
FQEGVCEIWLTSEDTGAYGKDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
SKILNHPRVYAFLHVPVQSASDSVLMDMKREYCADDFRRVADFLKDKVPGITIATDIICG
FPGETDADFQETCDLVKEYRFPSLFINQFYPRPGTPAAKMDQVPAQVKKQRTKELSALFH
SYNPYDHKIGETQQVLVTEESFDAQYYVAHNKYYEQVLVPKRSEFKGKMFEVEIFEAGKH
FLKGRPLDGHEVFTPSIAEPLQKGEVSGLTQEQLSLQQNGSVPSSGVLTASWSPWSLDRE
GLKLLSISLAVVAILVVFMWEKLH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcttgtgactccctgattgatgacattgaggacatggtgtcagctgacgac
ccgactccacaggagaggcagtatgccaggaagagcatcatccccagagccaggaagaga
aacacccagcagactacagaggtgctgcaagcagacagcgtaatccctggcatgcagaag
atctggatgaggacatggggctgctctcacaacaactcagacggggaatacatggctgga
cagctggcagcgagcggatacaggatgacagaggacccagcagaggctgatctgtggcta
ctcaacagctgcactgtgaaaaacccggccgaagatcacttcagaaactctatcaagaag
gcccaggagcaggataagaaggtggtggtagctggatgtgttccccaggcccagcccagg
atggactaccttaaaggactcagcatcattggggttcagcagattgaccgtgtggtggag
gtggtggacgaggctgttaaaggtcactcggtgcgtctgctgggtcagaagaagaacaac
gggaaacgtctcggcggcgccagactggatctgcccaagattagaaagaatcctctgatc
gagatcatatcgatcaatacaggttgtctgaatgcctgtacgtactgtaaaaccaagcat
gccagaggagacctggccagctaccctgtagaggaactagtggagagagccagacagtcc
ttccaagagggtgtgtgtgagatctggctgaccagtgaggacaccggggcttatgggaag
gacatcgggacagacctgcccactctgctatggagactagtggaagagattcctgaagga
gccatgctgagactgggcatgaccaaccctccgtacatcctggagcatctggaggaaatg
tctaagatcctgaaccatcctcgtgtgtatgccttcctccatgtcccggtgcagtctgcc
tccgacagtgtcctgatggatatgaagagggaatactgcgctgacgacttcagacgcgtc
gctgacttcctcaaagacaaggttcctggtatcaccatcgccacggacatcatctgtggt
ttcccaggggagacggatgctgacttccaggagacatgtgacctagtgaaggagtatcgc
ttccccagcctcttcatcaaccagttctacccccggcctggcacccccgccgccaagatg
gaccaggtccccgcccaagtgaagaaacaacgaaccaaagagctgtcggccctgttccac
tcctataacccctacgaccacaagattggggagacccagcaggtgcttgtgactgaggag
tcctttgacgcccagtactacgtggctcacaacaaatactatgagcaggtgctggtgccc
aagaggtcagagttcaaggggaagatgtttgaggtggagatcttcgaggcaggcaaacac
ttcctgaagggaagaccgctggacggccacgaagtgttcactccctccatcgccgagccg
ctgcagaagggagaggtgtctgggctaactcaggagcagctgtccctccagcagaatgga
tccgtcccctcctcgggcgtgctgactgcctcctggagcccctggagcctggacagagag
gggctgaagctgctgtccatcagcctggctgtggtggctattctagtggtcttcatgtgg
gagaaactccactga
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