Salvelinus fontinalis (brook trout): 129856906
Help
Entry
129856906 CDS
T11136
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03320
PPAR signaling pathway
sfon04148
Efferocytosis
sfon04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129856906
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
129856906
03320 PPAR signaling pathway
129856906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129856906
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfon03310
]
129856906
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
129856906
Nuclear receptors [BR:
sfon03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
129856906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129856906
NCBI-ProteinID:
XP_055780641
LinkDB
All DBs
Position
6:complement(6868661..6888069)
Genome browser
AA seq
431 aa
AA seq
DB search
MSSHQPTSSASNSPTSTFGSPFSVISPSLGSPGVAPSMGYGPISSSQINSTMGMHSISSS
DDVKPPFGLRPMSAHSPGIMLSQKRMCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLS
YTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQKSVQEERQRIREREEGLE
CSSAVNEEMPVEKILEAETSVEQRAELHSDAGCAGSSPHDAVTNICQTADKQLFALVEWA
KRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGVLLANELHRDNAHSAGVAAI
FDRESVQSAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDAKGLSNTGEVEL
LREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFL
MEMLEAPHQLA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcatcagcccaccagttcagcctccaacagtcccaccagcacctttggctcg
cctttctcagtcatcagcccctccctgggctcccctggtgtggcaccctccatgggttat
ggacctattagcagtagccagatcaactctacaatggggatgcactcaatcagcagctcg
gatgatgtcaaacccccgtttggcttgaggcctatgtctgcacacagccctgggataatg
ctctcccagaaacgcatgtgtgccatctgtggagaccgctcctctggtaagcactatggt
gtgtacagctgtgaaggttgcaagggcttcttcaaacgcacagtgcgcaaggacctgagc
tacacctgcagggataacaaagaatgcctggtggacaagcgccagcgcaatcgctgccag
tactgtcgctaccagaagtgtctggctatgggcatgaagagggaagtggtccaagatgaa
cgtcagaaatcagtccaggaggagcgtcagaggatcagggagcgagaggagggactggag
tgcagcagtgctgtgaacgaggagatgcccgtggagaagatcttggaggcagagacgtcc
gtggagcagagggcggagctccactctgatgcaggctgcgctggtagctctccccatgat
gcggtgacaaacatctgccagactgcagacaagcagctgtttgcgttggtggagtgggcc
aagaggatcccccacttctctgagctgcccctggacgaccaggtcatcctcctgcgtgca
gggtggaatgaacttctgatcgcctccttctcccaccgctccatcgctgtgaaggacggg
gtcctgctagccaatgagctacaccgggacaacgcacacagtgcaggggtggcggccatc
tttgacagggagagtgtgcagagtgctgaggtgggagccatatttgaccgggttctcact
gagctggtcagtaagatgagagacatgcagatggacaagacagagctgggctgcctccga
gccatcgtcctcttcaacccagacgctaaaggtctgtccaacaccggagaggtggagctc
ctgagagagaaggtctatgcgtcactggaagcctactgcaagcagaaatacccagagcag
cagggaaggttcgctaagctcctcctcaggctgccagcactgcgttctattggcttgaag
tgtttggagcacctgttcttcttcaagctgattggtgacacccctatcgacacgttcctc
atggaaatgcttgaagcacctcatcagttggcatag
DBGET
integrated database retrieval system
