Salvelinus fontinalis (brook trout): 129856985
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Entry
129856985 CDS
T11136
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sfon04054
]
129856985
Pattern recognition receptors [BR:
sfon04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
129856985
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GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
TIR
TIR_2
LRR_9
DHU1_N
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
129856985
NCBI-ProteinID:
XP_055780795
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All DBs
Position
6:9778014..9788855
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AA seq
974 aa
AA seq
DB search
MAGLKYKILASVAIVLHIAQFTVGYSFRNCTEDPTSNHTKFICIRHQAKNISTIVGDLPP
YATTIIISENLIKHIPDNTFDHFPNLRTLQIDNNHLETIDNQPFQNMSQLKSLNLSLNKI
SNLSSSVFQDLKNLVNLSLNNNSLIMLPPGIFSSLSNLDVLILRQNYLNNFSAVAESVTH
LTKLTKLDLCNNYLTSLHHSNHTDLPESLTSLYLCKNKLVTLACEWGFLSHVLLLDLSYN
NQLPSRAFQGLDLQKLNYMRLRSTNVTVPELLNVSNVRAGNIDFSGMGLKTDNLLMELCS
LLSTKVTFVKKLSLGSNGILSLRNNTLSNCPPIRGLLDLSFNQLRKVRCLHFLKGQDQIK
NFTAEKNHLTSLMSCNRQNLSFPNLTDLSYRYNRILKVNSFAFHHTPNVKTLQLNINIIA
YLDHKAFSGLTSLVTLRLDNNLLTDLYKDSFEDLHSLEILNLRNNQIAVIFNKTFHSLKC
LHILDLGGNKISHFEESAFVGLVNLANLYLDGNNLKQIDSAKFKPFHATLEVLDLHGNQV
SFSSKRTNSPFVNLTKLRNLKLDAQMPHGLNMLPYAFFRGLNSLQSLYLTDNHIFSFAAD
TFDDLTNLTFLSLDNSCAGVMQLQPGVFKNLRKLSKLSARNMGIQSFSNEVFGNLTELQI
LLLNQNVMQSLDVNVLEALPKLRYLDLRNIPLSCTCINSHLQNWTLTNQRVQLVLLYSLQ
CQDKKLQKSFYNFDTNVCYLDLGEYLFATTTTVILLLTIIPLLYNKLYWKLKYSYYVFRS
WFGQHWRRLRQKEEHCKYDAFISYNSADEPWVLDQLLPNLEGNGASFRLCLHHRDFELGR
NIVDNIVSAVYSSRKTICVVSRNFLCSEWCSLEIQLASYRLFHELRDVLLLIFLEPIPER
QLSAYHRMRKVMLKETYLQWPGSDCTDPVKAQELFWNHLRRALRSGSSRFEEEDEGREEY
FNQPPTDDNYYLMP
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctaaaatataaaatattggcatcagtggcaattgtccttcacattgcccag
ttcacagttggctatagcttcaggaattgcactgaggatccaacctcaaaccacacaaaa
ttcatttgcatccgtcaccaggcaaagaacatttctaccattgtaggtgacctgccacct
tatgccaccacaattataatctccgaaaacctgataaaacacatacctgacaataccttt
gatcactttcctaacctcaggactcttcagattgacaataaccatctggagaccatagat
aaccagccattccaaaatatgagccaactgaagagcctaaacctgtccttgaacaaaata
tcaaatctcagctcctctgtatttcaagacctcaaaaaccttgtcaacctgtcactaaat
aataactcactgattatgctccctccgggtattttctcttcactctccaatctggatgtc
ctcatattacggcagaactacctgaacaacttctctgcggtggcagaatctgtgactcac
ttaacgaagctgacaaaactagacctgtgcaataactatctaacgtccctccatcattct
aaccatacagacctaccggagtccctcacctccctctatctctgtaaaaacaaactggtc
actttagcatgtgagtggggcttcctcagccatgtactactgctggatctctcctacaat
aaccagctcccttcgagggcttttcaaggtctggacttgcagaagctaaactacatgcgt
ttgcgttcaaccaatgttacagtgccagagcttttgaatgtcagcaatgttagagctggg
aacatagacttctctggtatggggttgaagactgacaatctgctcatggagttatgcagc
cttttgagtacaaaggtcacatttgttaaaaagttgagtctgggaagcaatgggattctg
tcattgcgaaataacacactttcaaactgtccaccaatccgaggtttattggacctttcc
ttcaaccagttgaggaaggtaagatgcctccactttcttaaaggacaggatcaaatcaag
aacttcacagcagagaaaaaccacctcacctccctaatgtcctgcaacagacagaacctc
tctttcccaaatctgacagatctgagctaccgttacaatcgcatactcaaagtcaactct
tttgctttccaccacacaccaaatgtgaagaccctacaactcaacataaacataatcgcc
tatcttgaccataaggctttcagtgggctgactagtcttgtcacactgcgtctggacaat
aacctcctgaccgatctgtacaaggatagctttgaagatctgcatagcctggaaatactt
aatctacgtaacaatcagatagctgttattttcaacaagactttccattcactcaaatgc
ctgcacattttggatcttggagggaacaaaatcagtcattttgaagagtcagcctttgtg
gggctcgttaacctggccaatttgtacctcgacggaaacaatctcaaacagatcgacagc
gccaagtttaaaccattccacgccacacttgaagttcttgatctacatgggaatcaggtt
agcttctcctctaaacgtaccaactctcctttcgtgaatctaacaaaacttcgcaacctc
aaactagatgcgcagatgccccacggcctcaacatgctgccttatgcctttttccgtggt
ctcaactccctccaatcgctctacctcaccgacaatcacatcttcagcttcgcagcagac
acttttgacgatctgacaaacttgactttcctctccttggacaactcctgtgccggggtg
atgcagctgcagccgggcgtcttcaaaaacctgcggaaattgagcaagctcagtgcaagg
aacatgggcatccagtccttctcaaatgaggtttttgggaatctgacagagctgcagatc
ttgcttctcaaccaaaacgtaatgcaatccttagatgtgaatgtgctggaggctctccct
aaactgcgctacctggacctgcgcaacattcctcttagttgcacctgcatcaacagtcac
ctgcagaactggactttgactaaccagagagtccagttagtcttactatacagtttacag
tgccaagataaaaaactccaaaaaagcttctacaactttgacaccaatgtttgctacctg
gacctgggagagtacctttttgccaccacaaccactgtgattttactgctgactataatc
ccgcttctctacaacaagctgtattggaaactgaagtatagctattatgtgttccgctcc
tggttcggccaacactggcgcaggctgaggcagaaagaggagcactgcaaatacgatgct
ttcatctcctataactcggcggacgagccctgggtactagaccagctacttcccaacctg
gagggcaacggagcctctttccggctgtgcctgcaccaccgtgactttgagctgggccgc
aacattgtggacaacatcgtctccgccgtgtacagcagccgcaagaccatctgcgtggtt
agtaggaatttcctgtgcagcgagtggtgctccctggagatccagctggccagctacagg
ctcttccacgagctccgggacgtgctcctgctcatcttcctggagcccatccctgaaaga
cagctgtcggcttaccaccgtatgagaaaggtaatgttgaaggagacctacctgcagtgg
ccggggtcagactgcactgacccggtcaaagcccaggaactgttttggaaccatctgagg
agggcactgaggagcgggagcagcaggtttgaagaggaggatgaggggagggaggaatac
ttcaatcagccaccgacggatgataactattacttaatgccttaa
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