KEGG   Salvelinus fontinalis (brook trout): 129857004
Entry
129857004         CDS       T11136                                 
Symbol
pik3r4
Name
(RefSeq) phosphoinositide 3-kinase regulatory subunit 4
  KO
K08333  phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon04136  Autophagy - other
sfon04140  Autophagy - animal
sfon04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    129857004 (pik3r4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    129857004 (pik3r4)
   04136 Autophagy - other
    129857004 (pik3r4)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sfon01001]
    129857004 (pik3r4)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfon04131]
    129857004 (pik3r4)
Enzymes [BR:sfon01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     129857004 (pik3r4)
Protein kinases [BR:sfon01001]
 Serine/threonine kinases: Other
  VPS15 family
   129857004 (pik3r4)
Membrane trafficking [BR:sfon04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    129857004 (pik3r4)
 Autophagy
  Autophagosome formation proteins
   PI3K complex
    129857004 (pik3r4)
SSDB
Motif
Pfam: VPS15-like_hel Pkinase Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR5 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 HEAT PK_Tyr_Ser-Thr Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_WDR3_2nd EIF3I NBCH_WD40 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_CAF1B_HIR1 Beta-prop_EML CEP104-like_TOG Adaptin_N TCAD9 ARM_TBCD_2nd Cnd1 APH WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 129857004
NCBI-ProteinID: XP_055780827
LinkDB
Position
6:10640769..10656328
AA seq 1343 aa
MGNQLAGIAPAQILSVDSYFSDIHDHEYDKSLGSTRFFKVARAKHREGLVVVKVFAIQDP
SLPLTSYKQELEELKIRLHSCQNCLPFQKASLTEKAAILFRQYVRDNLYDRISTRPFLNN
VEKRWLAFQILTAVDQAHKSGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPEDNPAD
FNYFFDTSRRRTCYIAPERFVDGSMFTTESDQNTPLVDLTSNSQRSRGELKQAMDIFSAG
CVIAELFTEGVPLFDLSQLLAYRKGHFQTEHVLMKIEDHYIRELVAQMVQREPEKRLTAE
EYLKQQRGNAFPDIFYTFLQPYMAQFAKETFQSADERVLVIRKDLDNILHNLRGGGPGGS
TEKPEKEDQESSVVSAKEEQGLVVLVSVITSCLQTLRSCDSKLAALELVLHLAGRLRVET
LLDRITPYLLHFCSDLAPRVRAQAVRTLAKVLALVKEVPRNDVNIYPEYILPGIAHLAQD
DATIVRLAYAENIAHLAETALRFLELVQENNLNMEHGLNGEDTEETLHPNENYDSELQAL
HEMVQQKVVTLLSDSENIVKQSLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHL
RGAFFDSIVGVAAYVGWQSSSILKPLLQQGLSDAEEFVIYKALNSLTCMCQLGLLQKPHI
YEFVSDIAPFLCHPNLWIRYGAVGFITVVAQHLNIADVYCKLMPHLNPFITQPIIQIDKE
IVLLSVLKEPVSRSIFDYSLRSKDIASLFRHLLLRQKKRSGSLPECPIPEDPAIAQLLKK
LLSQGMTEAEEDKLLALKDFMLKSNKAKANMGDQSHLGEAVQSGVIDLATLGIMGRQVDL
VKPKQEAEDKRARKHTKQDSNMNEEWKSMFGSQESAATAPEPPTMSDGAGTQTRKTTASP
GVPVGQSAGAVSTYQRRLNTCKAELQHLVQQKREQCSAERMAKQMMESAEWESRPPPPGW
HPKGLLVAHLHEHKSAVNRIRVSDEHSIFATASNDGTVKVWDSQKMEGKTTTTRSVLTYS
RIGGHVKTLTFCQGSHYLAAASDNGSIQLLAIEANKPPKSPKVNPFQTRFLDQKDDGCVV
DIHHFNSGAQSVLAYATVNGSLVGWDLRSNSNAWTLRHDLRLGLITSFTVDMHQCWLCLG
TSNGTMACWDMRFQLPISNHSHPARARIRRLLMHPLYQSSVIAAVQGNNEVSMWDMETGD
RKFTLWASSAPPLSEMQPSPHSVHGIYCSPADGNPLLLTAGSDMRIRFWDLAYPERSYIV
AGGANEPLHCPSVLYSRKIIEGTEVVQEIHSKQKSGATEDAPRRGPESLPVGHHDIITDI
ATFQTTQGFIVTSSRDGIVKVWK
NT seq 4032 nt   +upstreamnt  +downstreamnt
atggggaatcagctagcagggatcgctcctgcccagatcctatctgtcgacagctacttc
tctgacatccatgatcacgagtacgacaagagcctgggcagcacgcgcttctttaaggtg
gcccgcgccaagcacagggaaggcctggtggtggtgaaggtgtttgccatccaggaccca
tctctacctctcaccagctacaagcaggagctggaggagctaaagatcagactacactcg
tgccagaactgcctgcccttccagaaggcctccctcactgagaaagcagccatcctcttc
cgccagtacgtccgggacaacttgtatgatcgcatcagcacgcgacccttcctcaacaat
gtggagaagcgctggctagccttccagatcctcaccgccgtagaccaggcgcacaaatcg
ggcgtgcgccacggtgacattaagacagaaaacgtgatggtgaccagctggaactgggtg
ctgctcacagactttgccagcttcaagcccacctatctgcctgaggacaacccagctgac
tttaattacttctttgacacgtctcgacggaggacatgttacatcgcccccgagaggttt
gtggatgggagtatgttcaccacagagagcgaccagaatacccctctggtggacctcacc
agcaacagccagaggagcaggggagagctcaaacaggcaatggatatcttctcagcaggt
tgtgtgatcgcagaactcttcacagagggagtaccactgtttgatctctcccaacttctg
gcgtatcgcaaaggacacttccagacagagcatgttctcatgaaaatagaagaccattac
atcagagaactagtggcccagatggtgcagcgggagccggagaagcgtctgactgcggag
gagtacctgaagcagcagagaggtaacgccttcccagacatcttctacacctttctgcag
ccctacatggcccagtttgccaaggagaccttccagtcggcagacgagcgtgtgttggtc
atccgcaaggacctggataacatcctccataacctccgcgggggagggccaggcgggtcg
acagagaagcctgagaaggaggaccaggagtcgagtgtggtgtcggccaaggaggagcag
ggtctggtggtgttggtgtctgtcatcacctcctgcctccagacgctgcgttcctgcgac
tccaagctggcggctctggagctggtgctgcacctggcgggccgcctcagggtggagacg
ctgctggaccgcatcacgccatacctgctgcacttctgcagcgacctggcgccacgggtt
agggcccaagccgtgcgcaccctagccaaggtgctggcgctggtgaaggaggttccccgt
aacgatgtcaacatctacccagagtacatcctaccgggcatcgcccacctggcgcaggac
gacgccaccattgtcaggctggcatacgcagagaacatagcccacctggctgagacagct
ttgcgttttttagagctcgttcaggagaataacctcaatatggagcacggcttgaatggg
gaggacacagaggagaccctccaccccaatgagaactacgactctgagctgcaggcgctt
catgagatggtgcagcagaaggtggttacgttactgagcgactcagagaacatcgtcaag
cagtctctgatggagaacggcatcacgcggctctgtgtgttcttcggccggcagaaggcc
aacgacgtgctcctgtcccacatgatcactttcctgaacgacaagaatgactggcacctt
cggggagccttcttcgacagcatcgtgggtgtggcggcgtacgtgggctggcagagctca
tccatcctgaagcccctcctgcagcagggtctgagtgacgcggaggagtttgtcatctac
aaggccctcaactctctcacctgcatgtgccagctgggcctgctgcagaaaccacacatc
tacgagtttgtcagtgacatcgctccattcctgtgccaccccaacctgtggatccgctac
ggggcggtgggcttcatcaccgtggtggcccagcatctcaacatagcagacgtctactgc
aaactgatgcctcacctcaaccccttcatcacccagcccatcatacagattgataaagag
atagtactgctgagtgtgctgaaggagccagtgagccgctccatcttcgactactccctg
cgctccaaagacatcgccagcctcttccgccacctgctgctgcggcagaagaagcgtagc
ggctcactcccagaatgccccattccggaggaccccgccatcgcccagctgcttaagaaa
ctgctctctcaggggatgacggaggctgaagaggacaaactgctagcactgaaggacttc
atgctcaagtccaacaaggccaaggccaacatgggagaccagagccacctgggggaggca
gtccagagcggggtcattgacctggccacgctgggcatcatgggacgccaggtggacctg
gtcaaacctaaacaggaggccgaggacaagagagcacggaaacacaccaaacaggactcc
aacatgaatgaagagtggaagagcatgtttggctctcaggagtcagcggctacggcacca
gagccccccacgatgtctgacggggcagggactcagaccaggaagaccacagcctcccct
ggtgtccctgtggggcagtctgcaggcgcagtctccacctaccagcgtcgtctcaacacg
tgcaaggcggagcttcaacatctggtgcagcagaagagggagcagtgcagcgcagagcgc
atggccaagcagatgatggagagcgctgaatgggagagccgtccgcctccgccagggtgg
caccctaagggtcttctagtggcccacctccatgagcacaagtcagctgtcaaccgtatc
cgtgtgtcagacgagcactccatcttcgccacggcctccaacgacggcaccgtcaaggtc
tgggacagccagaagatggagggcaaaaccaccaccaccaggtcagtgctgacgtactcc
cgcatcgggggccacgtgaagacgttgaccttctgtcagggatcacactacctggctgct
gcctcagacaacggttccatccagctcctggccatcgaggccaacaagccccccaaatca
cccaaagtgaacccctttcagacccggttcctggaccagaaggatgacggctgcgtggtg
gacatccaccattttaattctggagcccagtctgtgctggcctacgccacggtgaacggc
tccctggtgggctgggacctgcgctccaactccaacgcctggaccctccgccacgacctc
cgcctgggcctcatcacctccttcaccgtggacatgcaccagtgctggctctgcctgggt
acaagcaacggcactatggcatgctgggacatgcggttccagctgcccatctcaaatcac
tcccaccctgcccgagcacgaatcagacggctgctcatgcacccgctctaccaatcctcc
gtcattgctgcggtccagggcaacaatgaggtatccatgtgggacatggagactggggac
aggaagttcacgctgtgggccagctctgctccccctctctcagagatgcagccgtccccc
cacagtgtccatgggatctactgcagccctgcagacgggaaccccctcctcctcacagcc
ggctccgacatgagaatcaggttctgggacttggcttacccagagaggtcctacatcgtg
gcaggtggagccaatgaaccgctgcactgtccctcagtcctctacagccgcaagatcatc
gagggcaccgaggttgtacaggagatccacagcaaacagaagagtggagccacagaggac
gccccccgcaggggcccagagtccctccccgtgggccaccatgacatcatcactgacatc
gccactttccagaccacacagggcttcatcgtcacttcgtccagagacggcatcgtcaaa
gtctggaaataa

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