Salvelinus fontinalis (brook trout): 129857047
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Entry
129857047 CDS
T11136
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129857047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfon02000
]
129857047
04147 Exosome [BR:
sfon04147
]
129857047
04090 CD molecules [BR:
sfon04090
]
129857047
Enzymes [BR:
sfon01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
129857047
Transporters [BR:
sfon02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
129857047
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129857047
CD molecules [BR:
sfon04090
]
Proteins
129857047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Rad17
Zeta_toxin
AAA_16
RsgA_GTPase
AAA_5
G-alpha
AAA_28
AAA_7
AAA_30
AAA_29
NTPase_1
PRK
Abhydrolase_2
Motif
Other DBs
NCBI-GeneID:
129857047
NCBI-ProteinID:
XP_055780916
LinkDB
All DBs
Position
6:complement(11968855..12007659)
Genome browser
AA seq
1287 aa
AA seq
DB search
MGKKDEIAVAKVKIEQNGDIGYSVSSREDKDEEKKGGKEKEPKMPMIGAIALFRFADGWD
RLMIVLGTIMAMVNGTVLPLMCIVFGDMTDSFIGDSIQTQNNFTNITFPVSNTTLGEEMT
GHAIYYSIMGAVVLVAAYMQVAFWTLAAGRQVKRLRKLFFHCIMQQEIGWFDVNETGELN
TRLTDDIYKINEGIGDKVGMLIQSFTTFIASFIIGFSKGWKLTLVILAVSPVLGFSAFIF
SKVLTSFTSLEQSAYAKAGAVAEEVISSVRTVFAFGGQQKEITRYEKNLEDAKNMGIRKA
ISANIAMGFTFLMIYLSYALSFWYGSTLILSGEYTIGTVLTVFFTVLIGAFAMGQTSPNV
QAFASARGAAHKVYNIIDNKPHINSYSDHGHKPDVIKGNIEFNNIHFIYPSRPHVKVLKG
MSLSVRSGQTIALVGSSGCGKSTTVQLLQRFYDPQEGSVCVDGHDVRSLNVRFLREMIGV
VSQEPILFATTIAENIRYGRPDVTHQEIEQAAREANAYDFIMTLPDKFETLVGDRGTQMS
GGQKQRIAIARALVRNPKILLLDEATSALDAESETIVQAALDKVRQGRTTIVVAHRLSTI
RNADVIAGFQKGEIVELGTHSQLMEKEGVYHTLVTMQTFKSPEEGEEAVEEQVLEEKSPS
MMPFSETTLIRRKSTKGSSFIGSEKGDKDKTEVEEEDEEIPPVSFLKVLKLNLPEWPYMV
VGVICATINGGMQPLFAVIFSKIIAVFAEQDQELVRQRSSLYSIMFALIGVVSFITMFLQ
GFCFGKAGEILTMKLRLMAFKAMMRQELGWYDSHKNSVGALTTRLATDAAQVQGATGVRL
ATLAQNVANLGTSLIISFVYGWQLTLLILCVVPVMAVAGGIQMKMLSGHAVKDKKELEQA
GKIATEAIENIRTVASLTREQKFESLYQENLIVPYKNSQKKAHVYGITFSFSQAMIYFAY
AGCFRFGAWLIEEGIMTFENVFLVISAVLYGAMAVGEANSFTPNYAKAKISASHLMFLIN
REPAIDNCSQEGETPDHFDGNVRFQGVRFNYPSRPDLAVLQGLELKVQKGQTLALVGSSG
CGKSTTIQLLERFYDPLQGTVMLDNSDAKKLNIHWLRAQMGIVSQEPVLFDCSLAENIAY
GDNTRKVTMEEIQSAAKAANIHSFIDDLPQKYDTQAGDKGTQLSGGQKQRIAIARAILRN
PKVLLLDEATSALDTESERVVQEALDVARQGRTCIVVAHRLSTIQNADLIAVFQKGVVVE
QGTHQQLLSQRGVYYSLVTTQLGHGRN
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaggacgagatagccgtggccaaagtcaagattgagcaaaacggagacatt
ggatattctgtttcttctagagaggataaagatgaagagaaaaaggggggaaaggagaaa
gagccaaagatgccgatgattggcgccatagctctgttcaggtttgctgatggttgggac
aggttgatgattgtgctggggaccatcatggctatggttaatggaacggtcctccctctc
atgtgtatcgtctttggggacatgactgacagcttcataggagactccatacagacacag
aataacttcaccaacatcacgttccctgtttccaacaccactctgggagaggagatgacg
ggccatgctatctactactctataatgggtgcggtggtgttggtagcagcctacatgcag
gtggccttctggaccctggccgcaggcaggcaggtcaaacgcctcaggaagctcttcttc
cactgcatcatgcagcaggagatcggctggttcgacgtcaacgagacgggagaactcaac
acccgcctaacagatgacatctataagatcaacgaggggataggtgacaaggtgggcatg
ttgatccagtccttcaccaccttcatcgcttccttcatcatcggcttcagcaaaggatgg
aagctcacccttgtcatcctggctgtcagccctgtgctgggcttctctgcttttatattc
agcaaggtactgacgtccttcacatccctggagcagagtgcttatgctaaagctggagcc
gtggctgaggaggtgatctcttctgtcagaacagtcttcgctttcggtggacaacagaag
gagataaccaggtacgagaaaaacttggaggatgctaagaacatggggatccgtaaagcc
atctctgctaacatcgccatgggcttcaccttcctgatgatctatctgtcctacgctctg
tccttctggtacggcagcacactcatcctatctggagaatacaccattggaactgtcctc
accgtgttcttcacagtgttgatcggggcgtttgccatgggacagacttctcctaatgtc
caggccttcgccagtgcccggggagcggcacacaaagtctacaacatcatcgacaataaa
ccccacatcaacagctactcagaccacggccacaagcctgatgtcatcaaaggaaacata
gagtttaacaacatccatttcatctacccctcacgaccccacgtcaaagtgttgaaagga
atgtctctgagtgtgcgtagtggccagaccatagctctggtaggcagtagtggctgtggg
aaaagcaccaccgttcagctgctgcagcggttctatgatccacaagagggatcagtgtgt
gtagatggtcatgacgtgcgctccctgaacgtgcgcttcctgagagagatgattggcgtt
gtcagtcaggagcccatcctgtttgctaccaccatcgctgagaacatccgctacggacga
cctgacgtcacacatcaggagatagaacaggctgctagggaggccaacgcttacgacttc
atcatgacactacctgataagtttgagactctagttggagacagaggaacccagatgagt
ggaggacagaaacagaggatcgctatcgcacgcgctctcgtacgcaaccccaagatcctc
ttgttggatgaggctacctcagccctcgacgccgagagtgagaccatcgtacaggctgct
ttggacaaggtgagacagggtcgtactaccatcgtggtggcccatcgtctgtctactatc
cgtaatgctgatgtcatcgcaggcttccagaagggagagatcgtagagctgggaacacac
agtcaactgatggaaaaagaaggagtctaccacacactggtcaccatgcagacgtttaag
agtcctgaggagggcgaggaggctgtggaggagcaggttctggaggagaagagtccgtca
atgatgccgttctcagagaccaccctcatccggaggaaatctaccaagggatcgtccttc
atcggctcagagaaaggagacaaggacaagactgaggtggaagaagaggatgaggagatt
cctcctgtgtcgtttctgaaggtgttgaagctgaaccttcctgagtggccctatatggtg
gttggtgtgatctgtgccactatcaacgggggcatgcagcctctcttcgctgtcatcttc
tctaaaatcatcgctgtgtttgcagagcaagaccaggaactagttagacaacgctcctcg
ctgtactctatcatgttcgccctcattggagtcgtctccttcataaccatgttcctacag
ggattctgttttgggaaggccggtgagattctgaccatgaagctgagactgatggccttt
aaagccatgatgagacaggagttgggctggtatgacagtcacaagaacagtgttggagct
ctcaccactagactggctacagacgcagcacaagtacagggggctacaggagtgcgtttg
gccactctggcccagaacgtggctaacctgggcaccagtctgatcatctcgtttgtgtac
ggctggcagctgactcttctcatcctgtgtgtggtacctgtcatggctgtagctggaggc
atacagatgaagatgctctctggtcacgccgtcaaagacaagaaagagctagaacaggct
ggcaagattgccacagaggccatagagaacatccgtacggtggcgtctctcaccagagag
cagaagtttgagtctctgtaccaggagaacctcatagtgccttacaagaactctcagaag
aaggcccatgtgtatggcatcacattctccttctctcaggccatgatctactttgcctat
gcaggctgcttccgcttcggggcctggctcatagaggaaggcattatgacctttgaaaat
gtcttcctggtgatctctgcagtgctgtacggagccatggcagtaggagaggccaactcc
ttcacgcctaactacgccaaagccaagatatcagcatctcaccttatgttcctcatcaac
agagaacctgccatagacaactgctcacaggagggagaaacaccggaccactttgatggt
aacgtgcgtttccagggggtgaggttcaactacccgtcccgtccagaccttgctgtcctg
cagggactggagctgaaggtgcagaagggccagactctagccctggtgggcagcagtggc
tgtgggaagagtacgaccatacaattactggagaggttctacgacccactacagggcaca
gtgatgttggacaacagtgatgctaagaagctgaacatccattggctgagggcccagatg
ggcatcgtatcccaggagcccgtgctgtttgactgtagtctggcagagaacattgcctac
ggagacaacacacgcaaagttaccatggaggagatccagagtgctgctaaagctgccaac
atacacagcttcatagacgacctgcctcagaagtatgacacccaagctggtgacaagggg
acccagttgtcaggaggacagaagcagcgtatagccattgccagagccatcctccgcaac
cccaaagtcctgctgctggacgaggccacctccgcactggacacagagagcgagagggtg
gtgcaggaggccctggatgtggctcgacagggcaggacgtgtatcgtggtggcccaccgc
ctttccaccatccagaacgctgacctgatcgctgtcttccagaagggagtggtggtggag
cagggcactcatcaacaactactgtcccagagaggagtatactactcactggttaccaca
cagctgggccatggcagaaactga
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