Salvelinus fontinalis (brook trout): 129857159
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Entry
129857159 CDS
T11136
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129857159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129857159
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
129857159
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
PDS5
TRIM_CC
Cnd3
Cnd1
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
129857159
NCBI-ProteinID:
XP_055781106
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All DBs
Position
6:16086131..16131193
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AA seq
1291 aa
AA seq
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MEVQHSDESSHDSLEEIEDISDSGSDFEVQLKAMKRRKQTTALLGPRPPKRPRRKAASQA
SPNPSTTSTPPAHSPQPPQPSPGRTRQLGSPRRERERRGNQGMSAGDMYEAVRSGKSAMV
AVVDEWLDSYKQDREAGLLELINFVVQCCGCKGVVSREMFDGMQNAEIISTLTKDFNEDS
VNYPLCSPGPQWRKFRAGVCEFVQVLVRSCKNSLLYDEYLFSALLALLTGLSDSQVRAFR
HTSTFIAMKLMTGIVEVAVIVFAQIKTTQRRYDVERSKSAEHRASERLEELQATISELRE
HQEELSSMMNATFRGVFVHRYRDRVAEIRAVCIEEMGVWLRENPGDFLNDGYLKYLGWTL
HDKQGSVRLQCVRALQGLYKEKDLIGRLELFTSRFKERMLCMVLDKDPDVAVEAVQLLLL
LQQRTEEGLSEEECSHVYPLVFASRRGLASAAGAFLYHKLCSAMSSEPQEADMGGRRAAF
FNLLVSFYIQSEFHEHGAYLVDSLWGVAGSELRDWDTMTSLLVQEADQGQGLVDEEEGAL
IELMMCAVRQAAEGHPPVGRAQAKKILSMKDKKTQAQDKRRITTHFITILPQLLAKYSAD
VEKVTCLLKAPLHFDLETYSSTGRLEKYLDLLLVQVCGIVEKHTESGVLEACARVACALC
HDKYTFSGRADLVVSQLLDSLTDRFSSHLNELLQGTADEDEVYSAATALTRIAAFSSAKD
LTSWKLFEPCFQLLKSGVESRDIDKELMVPALKCAAFHVLWEKVRVANSTPTKAEVKRLK
KEVRSFCIVCQSCLSVGQPEIRDQAFELLCDMLLLFGVSSVRSQPTLQPLAHPPSDSLRF
DMAAFLLDYVFTEPDDDQLSGEAEGVEEVKMATLQRRRNQLAGYCKLVIYGILDLSTATD
VFKYYSKFYKDYGDIIKETLSKTKVISPVQSAKTVCLSLQQLFSALAPECVDGGQEFGEI
RELAKRLAMSFGIDLHRVRKPLVSLHMDGIRFALREAADVEQPPNLPFLEILSEFSFKLL
RQDRAQLSAFLSAECGSVAPSWPSLRMYQRSLQSGSSKPREEGERSATLSPHSTPAAKRR
RTTPQGSVSSASRGPWLDSSSIHSSVATPGLTSTVQRLPSKHLPVTHNTQASTTGSDKGS
IISEPESDDDFSEGGIHSNLATPGLTSTVQRQPSKHLPVTHNTQASTTGSDKGSIISEPE
SDDDFSEGSLQRKVEPRRRSKLPIAQASPSGHCDLESHLTMLSLIEEDEDDEVEEEEPEI
EDFESDDSDHDTAFTLPSTRHSTSYLEELFQ
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgcaacactctgatgaatcaagccatgacagtcttgaggagatcgaggacatc
tcagactctggcagtgactttgaagtccagctgaaggccatgaagcggagaaaacagacc
actgcactactaggacctcggccacccaagagacctaggcgtaaagctgcatcccaggcc
agcccaaatcccagcaccacctccaccccaccagcccattcccctcagccaccgcagcct
tccccggggagaactaggcagctcggctcccccaggcgagagagagagaggagggggaac
cagggcatgagcgctggggatatgtatgaggctgtgaggtctggaaagagtgctatggtg
gcggtggtggacgagtggctagacagctacaagcaggatcgggaggcgggcctactggag
ctcatcaacttcgtcgttcagtgctgtggctgcaaaggtgtggtgagcagagagatgttt
gacggcatgcagaacgctgagatcatcagcacactgaccaaagatttcaatgaggattct
gtgaactaccccctgtgctcccctggtccccagtggcgtaagttccgggctggcgtgtgt
gagtttgtgcaggtgctggtgcgctcctgcaagaacagccttctgtacgacgagtatctc
ttctctgccctgctggccctgctcaccggcctgtctgactcccaggttagggccttcaga
cacaccagcaccttcatcgcgatgaagctgatgactggtatagtggaggtagcagtgata
gtgtttgcccagattaagaccacccagagacggtacgacgtggagaggagcaagagtgcc
gaacacagagcctcagagaggctggaggaactacaggccaccatcagcgagctgcgggag
caccaggaggagctgtcctccatgatgaatgctacgtttcggggtgtatttgtgcaccgc
taccgggaccgcgtagctgagatcagggccgtatgtatcgaggagatgggcgtgtggctc
cgagaaaaccctggagacttcctcaacgacggatatctcaagtacctgggctggaccctg
cacgacaagcaaggctcagtgcgtctgcagtgtgtgcgggccctgcagggcctctacaag
gagaaagacttaattggacgcctagagcttttcaccagcaggtttaaggagaggatgctc
tgcatggtgctagacaaggacccagacgtggcagtggaagctgtccagctgctgctgctc
ctccaacaaaggacagaggagggcttgtccgaggaggagtgtagccatgtgtatcctttg
gtgtttgcctcccgcagaggcctggcatctgctgctggtgccttcctctaccacaagctg
tgtagtgcgatgagcagcgagccacaggaggcagacatgggcggccgccgggccgccttc
ttcaacctgctggtctccttttacatccagagtgagttccatgagcacggggcctacctg
gtggacagtctatggggtgtagcaggctctgagctgagggactgggacaccatgacatca
ctgctggtacaggaggctgaccagggacaaggtctggtggatgaggaggagggggcgttg
atagagttgatgatgtgtgctgtcagacaggcagctgaaggacacccgcctgtaggaaga
gctcaggccaagaagatcctgagcatgaaggataagaagacccaagcccaggacaagaga
cgcatcaccacccattttatcactatcctgccccagctgctggccaagtactcggcggac
gtggagaaagtgacttgccttctgaaggctccgcttcattttgacctggagacctacagc
agcactggtagactggagaagtatctggatctgctgctggtccaggtgtgtggcatcgtg
gagaaacacacggagtctggtgttttggaggcgtgtgctcgcgtggcgtgtgccctctgc
cacgacaagtacaccttctcaggccgtgccgacctggtcgtcagccagctactggacagt
ctgaccgaccgcttcagctcccacctcaacgagctgctgcagggcactgctgatgaagat
gaggtgtacagtgctgctactgccctgacgaggatcgcagccttcagcagtgccaaggac
ctgacttcatggaagctgtttgagccctgctttcagctgctgaagagtggagtagagtcc
agagacatcgacaaagagctgatggttcctgctctgaagtgtgcagcgttccacgtgctc
tgggagaaagtcagggtggccaactctacaccaaccaaggcagaggtaaagcgtctgaag
aaggaggtgcgttcgttctgcatcgtctgtcagagctgcctgtctgtgggccagccagag
atcagagaccaggcgtttgagctgctgtgtgacatgctgcttttgtttggggtgagctca
gtgaggtctcagcccaccttgcagcccctggcccaccccccctccgactccctccgcttc
gacatggctgccttcctccttgactatgtcttcactgagcctgacgacgaccaactgtcc
ggtgaggcagagggagttgaggaggtgaagatggctactctccagcggcggcgcaaccag
ctggccggctactgtaaactggttatctatgggatcctggatctcagcactgccactgat
gtcttcaaatactacagcaagttctacaaagactacggtgacatcatcaaggagactctg
agcaaaaccaaggtgatcagtccagtgcagagcgccaagactgtctgcctgagtctgcag
cagttgttctcagcactggctccagagtgcgttgatggaggccaggagtttggggagatc
agagagctagctaaaaggctggccatgagcttcggcatagacctgcaccgcgtccgcaaa
ccattggtgtccctgcatatggatggtatccggtttgcgttacgggaggcagcagacgtg
gagcaaccccccaacctgcccttccttgagatactcagcgagttcagtttcaaactccta
cgtcaggaccgagcccagctgtctgctttcctgagtgctgagtgtggctctgttgccccc
tcctggccatctctgaggatgtaccagcgctctctgcagtctggctcctccaagccccga
gaggagggggagaggagcgccacgctgtcgccccacagcacccctgcagccaaacgcagg
aggactaccccccaggggtcagtgtccagcgctagcagagggccatggctggacagcagc
agtatccatagcagcgtggccaccccaggcctcacctccaccgtgcagagactgccatcc
aagcacctgccagtcacacataatacacaggcctccaccacaggctctgacaagggcagc
atcatctccgaacccgagtctgatgacgacttttcagagggcggcatccacagcaacctg
gccaccccaggcctcacctccaccgtgcagagacagccgtccaagcacctgcccgtcaca
cataatacacaggcctccaccacaggctccgacaagggcagcatcatatccgaacccgag
tctgatgacgacttttcagagggttcactgcagcgcaaggtggaacccaggcgaaggagc
aagctgcctattgcacaagccagcccctctgggcactgtgacctcgaatcacatctcacc
atgctgagtctgattgaggaagatgaggatgatgaagtggaggaagaagagcctgagatt
gaggacttcgagagtgacgattctgaccacgacactgcctttacactgccgtccacccgt
cactccaccagttacttagaggagttgtttcagtga
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