Salvelinus fontinalis (brook trout): 129857241
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Entry
129857241 CDS
T11136
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129857241
Transcription factors [BR:
sfon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129857241
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
129857241
NCBI-ProteinID:
XP_055781266
LinkDB
All DBs
Position
6:18124220..18195050
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AA seq
2700 aa
AA seq
DB search
MKPLKKQRVRSPPSTRAKGGKKRGASETPPERDNRNKLRKENQDGQPQTTTPAHLLRKQS
TTSSDSSQQEPIRGSETPKKEGPTEQVLQRQPEDKEKTEDSRGGVGGKSGGPNSTPTSSH
NNTLTIPTPTTSPSPTSMSSRKTATFKARVPKKKYIAEHYAGSNAPGLTFTPAPMHNSHS
NYSSTSSSTNSNNSSNTISNSSRTNTTINGINSISNSISNSISNSRSSSSVSHSLAPSVS
NEEWKVAASSHRHDPGERGLTGASIGPNNGSVAPQDRERDPQGGETEAEWAPNSVRSVST
DTASEHDLEVNSQPSTSPVRAPYHGSLLPYSATTFQPGPNPSHRKGSLSGADALAKGLKN
QRVLARCRWRDRLNGEQGGRERERDGPLSPMFRAGVVRRVSGGSADIQLQGEEGILCYPF
QGGTAHPEGEETSVEFILDAPPPGTVSVAIGTRVCVPFGGGRDGGEQGTPQLYREGVLSQ
VDPHPAVSFPYRVLLCEDREELENGGREEEGGMEEERRRAQAQAVWVSRQSLRLLTPPWE
LPHTEGGGEREREREERERREEMEVEREVCQLSTGMALGGPMGGGARLVHSFSPAGVVGG
HHYGNIPPHPSSLVTTSVVASTGEGYPDREIEQEREQERQKQPQTPEEDMEMSRFSMGTQ
PRHILSKPLLGGHSYPSSQHLVQGLGTPLGSHLSSLTLPGPEALGMTPTPHLPPSKSALV
PLDKTPSQIPTPTPGGGSTSSSASSSRSRTPLSAALQKYKKGDVVCTPNGIRKKFNGKQW
RRLCSREGCMKESQRRGYCSRHLSMRTKEMEGAGGGGERDRGRGGGGGSSSGTVTPSDLR
GFDWDETSRDSSEASSRGDSRPRLVLPSLLPHDFSRFDFDECEAATMLVSLGSSHSGTPS
FSPTSNQSPFSPAPSPSPSPLFGFRPANFSPITASSVLPPPRRHRHPSATGGKLSTPGGA
ERERHTSGVQPSFHTNLTFTVPMSPSKRKTDVPPPSSHPHHDYPPKPELEQGDLNPASFP
VLSPQTPAHTHAYTPTFSCPRGVSTPTSRPPSSSSTTSPPPLLVSPTPPSPPDSGPRRFH
PTSQQALRDSPVIVRNPEVPLAKFTERPLGRGGGGVGDPKSLNSVTPQPVTTLQVPVPIN
AAAAAATNGTVLLQSPTPTLVLVSSAPPSLTSVTPGYPALACLSISTTPPSSGPPLTNPA
SPGEGRGRTERTGSFGGEVQQPVACHPSPTALLPLILPAENLHPTPCKDIIMGRPGTVWT
NVEPRSVPVFPWHSLVPFLAPTQSDASTQSGEGQQLINHPQAASLKTESQGGAVLLQEAN
EDPPTLERGPTTRPTPSTDDLAPEREREAERERPDSETESDVDDPFFPSVLPEPPLSVTP
VKRRTQSLSALPKDGDKISPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSK
ILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSDGRGLPGPGGKDI
RERSMSETTEPHGVELKGVGPGLLGVSERNPGEGHVGQLPRPRAFSQSAMHSLERSEKGN
TQALAELSQMCGDGGGQFSGRAQTLSRSQRGVSEDMTSDEERMVICEEEGDDDVIEDPYP
ASSIDLKCKERVTDSDSDNASGNESDRKRVFAPVICSSSSQPTPHGRSVSLSSYPSKRYD
EERGGLSDRRRKRGIEGGGDGGGVASLSLSLSSSGHSVISSPGGPFPSSLAPLGLSPVLG
LGAVRVASTVVTNVVRPVVSTPVPIASKPRDGAASSIPHPPDRRSLPLQQAQLLIGSGAG
SGGPGYYSSSSPNPIGAGAGPGGLVTSLVFPGHSQPTVQLISPSPNPSSHHQLPPTAPVS
APTHNHTNGPLPLSLLQPQFLSSSSLASPGGKAITQVQYILPTLSASSNPKSPSPQLHNL
PNSIFNLPTAPPTHMSIANGKQVGPGSLMGYASSPAVGVVSPGARVQSQSPVLQGKMLLP
MATVRTAPAPAQQFPLVAPPLPVQNGAQAGSKIFQIAPMPVVQSLLQQGGAGHPGSPFPV
TMGTATVLHQGSAPSQTVLLPPQPTRITYVQSTPGVPSALPLVSTTTGSSSPQQAQLTSG
SAYVPSPLATLGFTAIAPPGQNLVQPLITGQPPFQAPVQSPTCPSLPSGPASASGGQIIT
AIYPPTSVAIATGVVSMATGPPSMVYTVSSSSSLSTHILPKHTFAPATPTTHTHTHTQLQ
SDRQTDRHAGERPTDRTSHSQSEKAADRQAETQPELQAYGQTERQAQTFNKSSSLVGPPS
GSSLSLRPCSPPLPSHTSSSAPGTPKLPQLSVRTPQKIKATVANIPVGSYEGGGRGKERE
KNREREREKERENTGANSRFSFELERPVESTSPSQHTHTAEEPPSDRPPEGHGPGDNTDT
RSTEASNKESGWKDSVPSSPLPPPLGTDPALPPPQSDKDAPPPKKVKARPPPLKRTFDSV
DKVLSEVYFEERFAQLPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSSTED
PVSPKRKSRRRSSCSSEPSTPKSAAKCEGDVFTFDRPAPPSVCPPPGTGADGEDILGELE
FDKVPYSSLRRTLDQRRALVMQLFQEHGFFPSAQATAAFQARYSDIFPTKVCLQLKIREV
RQKIMQTAVPSETNEASSLPGPSGTQSGEGTGGAEPLGEEADREREGSPEEPRDLQESSR
NT seq
8103 nt
NT seq
+upstream
nt +downstream
nt
atgaagccactaaagaaacagagggtgcgctctcccccctccacacgggccaaagggggg
aagaagagaggggcgtcagagacccccccagagagggacaacaggaacaaactcaggaag
gagaaccaagacggacagcctcaaaccacaacccccgcccacttgctacggaaacaatcc
acaacctcctctgacagctctcagcaggagccaatcagaggcagtgagaccccaaagaag
gagggacctacagagcaggtgctgcaaaggcaacctgaagataaagagaagaccgaggac
agcagagggggggttggggggaaatcaggggggcctaacagcacccccacctcctcccat
aacaacaccctcaccatccccacccccactaccagtcccagccctacctccatgtccagt
aggaaaacagccaccttcaaggccagagtccccaagaagaagtacattgctgaacactat
gctggtagcaacgcccccggcctcaccttcacccctgcccccatgcacaacagccacagt
aactacagtagtactagcagtagtactaacagtaataacagtagtaataccattagtaac
agtagtaggactaacactactattaatggtattaacagcattagtaacagcattagtaac
agcattagtaacagccgtagtagcagctcagtcagccactcgttagcccccagtgtgtcc
aatgaggagtggaaggtagccgctagcagccacagacatgacccaggggaacgggggttg
acaggggcctccatagggcccaacaatggtagtgtggccccccaggacagagagagagac
ccccagggtggggagacagaggcagagtgggcccctaactcagtacgctccgtatccacg
gatacagccagcgagcacgatctggaggtgaactcccagcccagtaccagccctgttaga
gccccctaccatggcagcctgctcccttactctgctactaccttccagcccggccccaac
cctagccacagaaagggcagtctgtccggggcggatgccctggccaaaggcctgaagaac
cagagagttctagcccgctgtcgatggagagacagacttaacggagagcaaggtgggagg
gagagagagagggatggacccctgtctcctatgttcagggctggggtggtgcggcgggtg
agtgggggcagcgctgatatccagctgcagggggaggaggggatactctgttaccccttt
cagggggggaccgcacacccggagggggaggagacaagcgtggagttcatcctggacgcc
cccccacccggcacggtgtccgtggccatcgggacacgcgtatgtgtgcctttcggaggg
gggcgagatgggggtgaacaggggacacctcagctatacagagaaggggtgctgtcccag
gtagacccccaccctgccgtgtcgttcccatacagggtgctactgtgtgaggatcgagag
gagctggagaatggagggagggaggaggagggagggatggaggaggagaggaggagggcg
caggcccaggctgtatgggtgtccagacagagcctgaggctgctgactcccccctgggaa
ctgcctcacacagagggggggggagagagggagagagagagggaggagagggagaggagg
gaggagatggaggtggagagggaggtgtgccagctgagtactgggatggcgctgggtggg
ccgatgggagggggagcgaggttggtgcacagcttctctccagctggggtggtggggggg
catcactatggaaacatccccccccacccctcctcgttggtaacgaccagcgttgttgcc
agcactggagagggttaccctgacagagagatagaacaagagagggaacaagagagacag
aaacagccccaaacaccagaggaggacatggagatgtctaggttcagtatgggtacccag
cctcgccacatcctctccaagcccctcctcggggggcacagttacccctcctcccaacac
ctggtccagggcctgggcacgccactgggctctcacctgtcctccctcaccttgcctggc
cctgaggccctgggcatgacccccacaccacacctacccccgtccaagagtgccctggtc
cccctggacaagaccccctcccagatccccacccctacccctggaggggggtctacctcc
tcctcagcctcctcctcgcgctcccgtacccccctgtcggccgccctgcagaagtacaag
aagggagacgtggtgtgcacccctaacggtatccgcaagaagttcaacggcaagcagtgg
agacgcctctgttccagagagggctgtatgaaggagtcccagagacgaggctactgctca
cgccatctctccatgagaactaaagagatggagggagcgggaggagggggagagagggac
agggggagaggaggaggaggggggagcagttcggggacggtcaccccctctgacctgcgt
gggtttgactgggatgagacgtccagagacagcagcgaggccagcagtagaggagactct
cgccctcggctggtgctgccctccctcctaccccatgacttctccaggtttgattttgac
gagtgtgaggcagccaccatgctggtgtctctgggcagctctcactctgggaccccctcc
ttctcccccacctccaaccagtcccctttctcccccgccccctcgccctcaccctccccc
ctcttcggattccgtcccgccaacttctcccccatcaccgcctcctccgtcctcccccct
cctcgtagacacagacaccccagtgccacggggggcaagctgagcacccctgggggggca
gagagggagaggcatacctcaggggtccagccgtccttccacactaacctgaccttcact
gtccccatgagtcccagcaaacgcaaaacagacgttcctcctccctcctcccacccccac
cacgactacccccccaaacctgagctggagcagggggacctgaaccctgcctcgttcccc
gtcctctccccccaaaccccagcacacacccacgcttacacacccaccttctcctgtccc
cgaggggtgagcacaccaaccagccggcccccctcctcctcctccaccacctccccccct
cccctcctggtgtccccaactcccccctcccctccagactcaggcccccgccgtttccac
cccacatcccagcaggccttgcgggactctccagtaatcgtgcggaacccggaggttcct
ctggccaagttcacagagcgtccgttaggccgtgggggggggggagtaggtgatcctaag
agtcttaacagcgttactccccagcctgtcaccactctccaagtccctgtacccatcaac
gctgctgctgccgcggcaaccaacggcaccgtcctcctccagagccccaccccaaccttg
gtgctggtgtcatccgccccgccctccctgacctccgtcacccccggttacccagctttg
gcttgcctctccatctccaccacgcccccctcttcgggaccccccctcaccaacccagcc
agcccaggggaagggcggggtaggacggagaggacaggctcatttgggggggaggttcag
cagccagtggcctgtcacccctctcctacagccctgctgcccctcatactgcctgcagag
aacctgcaccccacaccatgcaaagacatcatcatgggacgccccgggacagtctggacc
aacgtggaaccccggtcagttcctgtgtttccctggcattcattggtccctttcctggca
ccaacccaatcagatgcctctactcagtctggtgagggccaacaactaatcaatcacccc
caagctgccagtctgaaaacagagtctcaggggggtgcagtgctgctacaggaggccaat
gaggacccccccaccctggagagaggacccacaacaaggccaactccctccacagatgac
ctggccccagagagggagagagaggccgaaagagagaggccagacagtgagactgagagt
gatgtggatgacccgttcttccccagtgtgcttcctgagccgcccttgtctgtgactcct
gtgaagagacgcactcagtccctcagcgccctgcccaaagatggggacaagattagccct
aacaagagggagaaagaccacatcaggcggccgatgaacgcattcatgatcttcagtaag
cgtcatcgagcgctggtgcaccagaggcaccccaaccaggacaaccgcacggttagcaag
atcctgggcgagtggtggtacgccctggggcccaaagagaagcagaagtatcatgacctc
gccttccaggtgaaggaggcccactttaaggcccacccagactggaagtggtgcaacaaa
gacaggaagaagtctagttctgatggccgagggctcccggggccggggggcaaagacatt
agagaaaggagcatgtctgagaccaccgagccccatggtgtagagctgaaaggggtgggg
cctggcctgctgggtgtgtctgagcggaatccaggggaggggcatgtaggtcagctaccc
cgcccccgagccttctcccagagtgccatgcacagcttggagaggagtgagaagggcaac
acacaggccctggccgaactgtcacagatgtgtggggatggtggtggccagttttcgggg
cgtgcccagaccctgtcccgttctcagaggggggtcagtgaggacatgaccagtgatgag
gaacgcatggtcatctgtgaagaggagggggatgatgatgtcattgaggacccgtaccct
gccagctccatagacctgaagtgtaaggagagagtgacggacagcgacagtgacaacgcc
tctgggaacgagagtgatcgcaagcgtgtctttgctccagtgatctgctcttcctcctcc
cagcccaccccccacggacgctccgtctctctctcctcctacccttccaaacgctacgac
gaggagagaggggggctctcagaccgcaggaggaagagaggaatagagggaggtggtgat
ggaggaggagtggcatccctctctctttccctgtcctcctcaggccactctgtcatctcc
agccccggaggcccatttccatcttcccttgccccccttggcctgtctcctgtcctgggc
ttaggggctgtcagagtggcctctacagtggtgaccaacgtggttcgtccggtcgtgagc
acgccagtccccatcgctagtaaaccccgagacggagcagcttcatccattcctcatcca
ccagacaggaggtccctcccattgcagcaggcgcagcttctgattggctccggagcagga
agcggagggcctggctactactcctcatcgtcacccaatcccataggtgcaggggcgggt
ccaggggggctagtgaccagcttggtgttcccaggccacagccagcccaccgtccagctc
atcagtccctcccccaatccgtcctcccaccaccagctgccccccaccgcccccgtctct
gcccccacacacaaccacaccaacggccccctgcccctctccctgctccagccccagttc
ctctcctcgtcatctctggcatcccccgggggcaaagccatcacacaggtccaatacatc
ctgcccaccctatcagccagctccaatcccaagagcccctcccctcagctgcacaacctg
ccgaacagtatcttcaacctgcccacagctccgcccacccacatgtccatagccaatggg
aagcaggtggggccgggctcgctgatgggatacgcctctagcccagccgtgggagtggtc
agcccgggagccagagtgcaatcccagtccccagtcctacagggcaagatgctgcttccc
atggcaacagtgaggacggcacccgcccctgcccagcagttccccctcgtggctccacct
cttcctgtccagaatggagctcaagcaggaagcaagatcttccagatcgctcccatgcct
gtcgtccaatccctgctccagcaaggcggggcagggcatcctgggagcccttttccggtt
accatgggaacggccacagtgttgcaccaaggttctgccccatctcagactgtgctgctg
ccgccccaaccaaccaggatcacctatgtccagtccacgccaggagtcccctccgctctg
cctctggtctccacaacaacaggctcctcctccccgcagcaggcccagctgacctctggg
tctgcatatgttccgtcgcccctagcaacgctgggctttacagccatagccccccctgga
cagaacctagtccaacccctcatcacaggtcagcctccctttcaggctccagtccagtcc
cctacctgcccctccctcccctctggtccagcctctgcttcagggggacagataatcacc
gccatctacccccctaccagcgtcgccattgcaactggggtggtctccatggcaaccggg
ccacccagcatggtgtatacagtctccagctcctccagtttgtccacccacatcctgccc
aaacacacattcgcccccgccacccccaccacacacactcacacacacacccagctccag
tcagacagacaaacagacaggcacgcgggggagagacccacggacagaacgtctcactct
cagtcagagaaagcggcagacagacaagcggagacgcagcctgagctacaggcgtacgga
cagacggagaggcaagcccagaccttcaataagagcagcagcttagtggggcccccaagt
ggctcctcattgtcactgcggccctgcagcccccccctgccctctcacacttccagcagc
gcaccaggcacccccaaactcccccagctctcggtgagaacccctcagaaaatcaaagcc
acagttgccaacatcccggtgggcagctacgagggaggaggccgaggaaaggagagggag
aagaaccgagagagggaaagggagaaagaaagagagaacactggggccaacagtcgtttt
tcctttgagctggagcgtcctgtggagtcgacgtccccctcccaacacacacacactgct
gaggagcccccctctgacagaccccctgagggacacggccctggggacaacactgacaca
cgcagcacagaggccagcaacaaggagtctgggtggaaggactccgtcccctcctcaccc
ctgccccctcccttgggtacagaccctgccctgccacctccccagagcgacaaagacgcc
cctcctcccaaaaaggtgaaggcccgccccccgccactcaaaaggacctttgactctgtg
gacaaggtgttgtcggaggtgtattttgaggagcgttttgctcagctaccagagttcagg
ccagaggaagtgctgccctcccccaccctgcagagcctggccacctccccccgcgccata
ctgggcagctaccgccgcaagaggaagaactccacagacctggactcgtcaacagaggac
cccgtgtctcctaagaggaagagcagaaggcgctccagctgcagctcggagcccagcaca
cccaagagcgccgccaagtgtgagggagatgtcttcaccttcgaccgaccagcccccccg
tctgtgtgtccccctccagggacaggtgctgacggagaggacatcctgggggagctggag
tttgacaaggtgccctactcctctctgagacgcaccctggaccagagacgagccctcgtc
atgcagctcttccaggagcatggcttcttcccatcagcccaggccacggcagccttccag
gcacgctactcagacatcttccccaccaaggtgtgtctgcagctgaagatcagggaggtc
cgacagaagatcatgcagactgccgtcccctctgagaccaacgaggcctcctcgctcccc
ggaccgtctggcacccaatcaggggaagggacaggaggggcagagccattgggagaggag
gcggatcgagagagggagggtagtccagaggagccgagggatttgcaggagtcatctaga
tga
DBGET
integrated database retrieval system
